BLASTX nr result
ID: Panax24_contig00028253
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00028253
(353 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OAY51929.1 hypothetical protein MANES_04G043600 [Manihot esculenta] 70 2e-21
OAY51928.1 hypothetical protein MANES_04G043600 [Manihot esculenta] 70 2e-21
XP_017238209.1 PREDICTED: uncharacterized CRM domain-containing ... 69 3e-21
XP_012853257.1 PREDICTED: uncharacterized CRM domain-containing ... 70 3e-21
XP_019250337.1 PREDICTED: uncharacterized CRM domain-containing ... 69 7e-21
KVI00468.1 RNA-binding, CRM domain-containing protein, partial [... 69 7e-21
XP_002456961.1 hypothetical protein SORBIDRAFT_03g046420 [Sorghu... 69 7e-21
XP_004969060.1 PREDICTED: uncharacterized CRM domain-containing ... 69 7e-21
XP_004971323.1 PREDICTED: uncharacterized CRM domain-containing ... 69 7e-21
XP_020153907.1 uncharacterized CRM domain-containing protein At3... 69 9e-21
CDM86674.1 unnamed protein product [Triticum aestivum] 69 9e-21
XP_020153908.1 uncharacterized CRM domain-containing protein At3... 69 9e-21
XP_015886980.1 PREDICTED: uncharacterized CRM domain-containing ... 69 9e-21
AJA91186.1 CFM7 [Zea mays] 69 1e-20
NP_001151028.1 CFM6 [Zea mays] ACG41350.1 CFM6 [Zea mays] ACR369... 69 1e-20
OMO94754.1 hypothetical protein COLO4_16174 [Corchorus olitorius] 67 1e-20
XP_016477083.1 PREDICTED: uncharacterized CRM domain-containing ... 68 2e-20
XP_009612721.1 PREDICTED: uncharacterized CRM domain-containing ... 68 2e-20
XP_016477207.1 PREDICTED: uncharacterized CRM domain-containing ... 68 2e-20
XP_018822553.1 PREDICTED: uncharacterized CRM domain-containing ... 67 3e-20
>OAY51929.1 hypothetical protein MANES_04G043600 [Manihot esculenta]
Length = 426
Score = 69.7 bits (169), Expect(2) = 2e-21
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+QEY EIAR+SG IP H IGDDT++FYRGKDYV+P V++ +L +K
Sbjct: 220 QVQEYAQEIARLSGGIPIHFIGDDTVVFYRGKDYVQPEVMSPIDTLSKK 268
Score = 59.7 bits (143), Expect(2) = 2e-21
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKS 263
G RG+FGG+ILNMHMHW++HETVKVICK+
Sbjct: 187 GRRGVFGGIILNMHMHWKKHETVKVICKN 215
>OAY51928.1 hypothetical protein MANES_04G043600 [Manihot esculenta]
Length = 353
Score = 69.7 bits (169), Expect(2) = 2e-21
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+QEY EIAR+SG IP H IGDDT++FYRGKDYV+P V++ +L +K
Sbjct: 147 QVQEYAQEIARLSGGIPIHFIGDDTVVFYRGKDYVQPEVMSPIDTLSKK 195
Score = 59.7 bits (143), Expect(2) = 2e-21
Identities = 23/29 (79%), Positives = 28/29 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKS 263
G RG+FGG+ILNMHMHW++HETVKVICK+
Sbjct: 114 GRRGVFGGIILNMHMHWKKHETVKVICKN 142
>XP_017238209.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Daucus carota subsp. sativus] KZN01099.1
hypothetical protein DCAR_009853 [Daucus carota subsp.
sativus]
Length = 400
Score = 69.3 bits (168), Expect(2) = 3e-21
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY +IAR+SG P HIIGDDTIIFYRGKDYV+P V++ +L +K
Sbjct: 222 QIQEYATDIARLSGGTPIHIIGDDTIIFYRGKDYVQPKVMSPIDTLSKK 270
Score = 59.7 bits (143), Expect(2) = 3e-21
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMHMHW++HETVKVICK
Sbjct: 189 GRRGVFGGVILNMHMHWKKHETVKVICK 216
>XP_012853257.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Erythranthe guttata] EYU24124.1
hypothetical protein MIMGU_mgv1a007947mg [Erythranthe
guttata]
Length = 390
Score = 70.5 bits (171), Expect(2) = 3e-21
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+QEY +EIAR+SG P HIIGDDTIIFYRGKDYV+P V++ +L +K
Sbjct: 231 QVQEYASEIARLSGGTPIHIIGDDTIIFYRGKDYVQPEVMSPVDTLSKK 279
Score = 58.5 bits (140), Expect(2) = 3e-21
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RGIFGGVILNMHMHW++HETV+VICK
Sbjct: 198 GRRGIFGGVILNMHMHWKKHETVEVICK 225
>XP_019250337.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Nicotiana attenuata] OIT00995.1 putative
crm domain-containing protein, chloroplastic [Nicotiana
attenuata]
Length = 443
Score = 69.3 bits (168), Expect(2) = 7e-21
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = -3
Query: 282 SKSSASQIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
+ S QIQEY +EIAR+SG IP IIGDDTI+FYRG+DYV+P +++ +L +K
Sbjct: 222 NSSKPGQIQEYADEIARLSGGIPIQIIGDDTIVFYRGRDYVQPKIMSPIDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 7e-21
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKSN 260
G RG+FGGVILNMH+HW++HETVKVIC S+
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICNSS 224
>KVI00468.1 RNA-binding, CRM domain-containing protein, partial [Cynara
cardunculus var. scolymus]
Length = 424
Score = 68.6 bits (166), Expect(2) = 7e-21
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+ EY NEIAR+SG IP +IGDDTI+FYRGKDYV+P V++ +L +K
Sbjct: 279 QVHEYANEIARLSGGIPIQVIGDDTIVFYRGKDYVQPEVMSPIDTLSKK 327
Score = 59.3 bits (142), Expect(2) = 7e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGV+LNMHMHW++HETVKVICK
Sbjct: 246 GRRGVFGGVVLNMHMHWKKHETVKVICK 273
>XP_002456961.1 hypothetical protein SORBIDRAFT_03g046420 [Sorghum bicolor]
EES02081.1 hypothetical protein SORBI_003G432800
[Sorghum bicolor]
Length = 405
Score = 69.3 bits (168), Expect(2) = 7e-21
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG IP +IIGDDTI+FYRGK+YV+P V++ +L +K
Sbjct: 228 QIQEYANEIARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPIDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 7e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICK 222
>XP_004969060.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Setaria italica] KQL05705.1
hypothetical protein SETIT_004070mg [Setaria italica]
Length = 402
Score = 69.3 bits (168), Expect(2) = 7e-21
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG IP +IIGDDTI+FYRGK+YV+P V++ +L +K
Sbjct: 228 QIQEYANEIARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPVDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 7e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICK 222
>XP_004971323.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like [Setaria italica] KQL08692.1
hypothetical protein SETIT_004086mg [Setaria italica]
Length = 400
Score = 69.3 bits (168), Expect(2) = 7e-21
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG IP +IIGDDTI+FYRGK+YV+P V++ +L +K
Sbjct: 228 QIQEYANEIARLSGGIPVNIIGDDTIVFYRGKNYVQPEVMSPVDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 7e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICK 222
>XP_020153907.1 uncharacterized CRM domain-containing protein At3g25440,
chloroplastic isoform X1 [Aegilops tauschii subsp.
tauschii]
Length = 396
Score = 68.9 bits (167), Expect(2) = 9e-21
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG +P ++IG+DTI+FYRGKDYV+P V++ +L +K
Sbjct: 232 QIQEYANEIARLSGGVPINVIGNDTIVFYRGKDYVQPEVMSPIDTLSKK 280
Score = 58.5 bits (140), Expect(2) = 9e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 199 GRRGVFGGVILNMHLHWKKHETVKVICK 226
>CDM86674.1 unnamed protein product [Triticum aestivum]
Length = 393
Score = 68.9 bits (167), Expect(2) = 9e-21
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG +P ++IG+DTI+FYRGKDYV+P V++ +L +K
Sbjct: 229 QIQEYANEIARLSGGVPINVIGNDTIVFYRGKDYVQPEVMSPIDTLSKK 277
Score = 58.5 bits (140), Expect(2) = 9e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 196 GRRGVFGGVILNMHLHWKKHETVKVICK 223
>XP_020153908.1 uncharacterized CRM domain-containing protein At3g25440,
chloroplastic isoform X2 [Aegilops tauschii subsp.
tauschii] EMT05806.1 Putative CRM domain-containing
protein [Aegilops tauschii]
Length = 393
Score = 68.9 bits (167), Expect(2) = 9e-21
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG +P ++IG+DTI+FYRGKDYV+P V++ +L +K
Sbjct: 229 QIQEYANEIARLSGGVPINVIGNDTIVFYRGKDYVQPEVMSPIDTLSKK 277
Score = 58.5 bits (140), Expect(2) = 9e-21
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 196 GRRGVFGGVILNMHLHWKKHETVKVICK 223
>XP_015886980.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Ziziphus jujuba]
Length = 308
Score = 68.6 bits (166), Expect(2) = 9e-21
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -3
Query: 282 SKSSASQIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
+ S Q+ EY EIAR+SG IP H+IGDDTIIFYRGK+YV+P +++ +L +K
Sbjct: 214 NSSKPGQLHEYAQEIARLSGGIPIHVIGDDTIIFYRGKNYVQPEIMSPIDTLSKK 268
Score = 58.9 bits (141), Expect(2) = 9e-21
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKSN 260
G RGIFGG+ILNMHMHW++HETVKVIC S+
Sbjct: 187 GRRGIFGGLILNMHMHWKKHETVKVICNSS 216
>AJA91186.1 CFM7 [Zea mays]
Length = 394
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG IP ++IGDDTI+FYRGK YV+P V++ +L +K
Sbjct: 228 QIQEYANEIARLSGGIPVNVIGDDTIVFYRGKSYVQPEVMSPVDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 1e-20
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICK 222
>NP_001151028.1 CFM6 [Zea mays] ACG41350.1 CFM6 [Zea mays] ACR36912.1 unknown [Zea
mays] ONM34368.1 RNA-binding CRS1 / YhbY (CRM) domain
protein [Zea mays]
Length = 394
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY NEIAR+SG IP ++IGDDTI+FYRGK YV+P V++ +L +K
Sbjct: 228 QIQEYANEIARLSGGIPVNVIGDDTIVFYRGKSYVQPEVMSPVDTLSKK 276
Score = 58.5 bits (140), Expect(2) = 1e-20
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RG+FGGVILNMH+HW++HETVKVICK
Sbjct: 195 GRRGVFGGVILNMHLHWKKHETVKVICK 222
>OMO94754.1 hypothetical protein COLO4_16174 [Corchorus olitorius]
Length = 433
Score = 66.6 bits (161), Expect(2) = 1e-20
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+ EY NEIAR+SG IP IIGDDTI+FYRGK+YV+P V++ +L +K
Sbjct: 223 QVHEYANEIARLSGGIPVQIIGDDTIVFYRGKNYVQPEVMSPIDTLSKK 271
Score = 60.1 bits (144), Expect(2) = 1e-20
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RGIFGGVILNMHMHW++HETVKVICK
Sbjct: 190 GRRGIFGGVILNMHMHWKKHETVKVICK 217
>XP_016477083.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like isoform X1 [Nicotiana tabacum]
Length = 445
Score = 67.8 bits (164), Expect(2) = 2e-20
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY +EIAR+SG IP IIGDDTI+FYRG+DYV+P +++ +L +K
Sbjct: 230 QIQEYADEIARLSGGIPIQIIGDDTIVFYRGRDYVQPEIMSPIDTLSKK 278
Score = 58.2 bits (139), Expect(2) = 2e-20
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKS 263
G RG+FGGVILNMH+HW++HETVKVIC S
Sbjct: 197 GRRGVFGGVILNMHLHWKKHETVKVICNS 225
>XP_009612721.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Nicotiana tomentosiformis]
Length = 445
Score = 67.8 bits (164), Expect(2) = 2e-20
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY +EIAR+SG IP IIGDDTI+FYRG+DYV+P +++ +L +K
Sbjct: 230 QIQEYADEIARLSGGIPIQIIGDDTIVFYRGRDYVQPEIMSPIDTLSKK 278
Score = 58.2 bits (139), Expect(2) = 2e-20
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKS 263
G RG+FGGVILNMH+HW++HETVKVIC S
Sbjct: 197 GRRGVFGGVILNMHLHWKKHETVKVICNS 225
>XP_016477207.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic-like isoform X2 [Nicotiana tabacum]
Length = 414
Score = 67.8 bits (164), Expect(2) = 2e-20
Identities = 30/49 (61%), Positives = 40/49 (81%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
QIQEY +EIAR+SG IP IIGDDTI+FYRG+DYV+P +++ +L +K
Sbjct: 199 QIQEYADEIARLSGGIPIQIIGDDTIVFYRGRDYVQPEIMSPIDTLSKK 247
Score = 58.2 bits (139), Expect(2) = 2e-20
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICKS 263
G RG+FGGVILNMH+HW++HETVKVIC S
Sbjct: 166 GRRGVFGGVILNMHLHWKKHETVKVICNS 194
>XP_018822553.1 PREDICTED: uncharacterized CRM domain-containing protein At3g25440,
chloroplastic [Juglans regia]
Length = 433
Score = 67.0 bits (162), Expect(2) = 3e-20
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = -3
Query: 264 QIQEYTNEIARMSGKIPFHIIGDDTIIFYRGKDYVRPNVITN*HSLQEK 118
Q+QEY EIAR+SG IP IIGD+TIIFYRGKDYV+P V++ +L +K
Sbjct: 224 QVQEYAQEIARLSGGIPIQIIGDNTIIFYRGKDYVQPQVMSPIDTLSKK 272
Score = 58.5 bits (140), Expect(2) = 3e-20
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -2
Query: 349 GWRGIFGGVILNMHMHWRRHETVKVICK 266
G RGIFGGVILNMHMHW++HETV+VICK
Sbjct: 191 GRRGIFGGVILNMHMHWKKHETVEVICK 218