BLASTX nr result

ID: Panax24_contig00028239 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028239
         (761 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258015.1 PREDICTED: serine/arginine repetitive matrix prot...    49   1e-06
XP_017258017.1 PREDICTED: serine/arginine repetitive matrix prot...    49   1e-06
KZM89474.1 hypothetical protein DCAR_023163 [Daucus carota subsp...    49   1e-06

>XP_017258015.1 PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X1 [Daucus carota subsp. sativus]
          Length = 1394

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%)
 Frame = +3

Query: 18  ESEKGINLSSECVVACSGSMPSILLESSIELQGAAQKVDTASIVKAGQPEDNCHVNHESI 197
           ESE G   SSE V++   S+ S  L+SS+  +G +++VD   IVK  + EDN   N    
Sbjct: 440 ESEMGFGQSSEHVLSLPASLQSKTLDSSLGFRGPSREVDKTVIVKDKKSEDNRDANQLYF 499

Query: 198 TGGISDEAFQQKVIKG 245
              I+D+ F+QK   G
Sbjct: 500 NTEIADKDFEQKSYVG 515



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 295 LKVDEFGRLVREGASDRD 348
           LKVDEFGRL++EG SD +
Sbjct: 536 LKVDEFGRLIKEGGSDSE 553


>XP_017258017.1 PREDICTED: serine/arginine repetitive matrix protein 2-like isoform
           X2 [Daucus carota subsp. sativus]
          Length = 1392

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%)
 Frame = +3

Query: 18  ESEKGINLSSECVVACSGSMPSILLESSIELQGAAQKVDTASIVKAGQPEDNCHVNHESI 197
           ESE G   SSE V++   S+ S  L+SS+  +G +++VD   IVK  + EDN   N    
Sbjct: 438 ESEMGFGQSSEHVLSLPASLQSKTLDSSLGFRGPSREVDKTVIVKDKKSEDNRDANQLYF 497

Query: 198 TGGISDEAFQQKVIKG 245
              I+D+ F+QK   G
Sbjct: 498 NTEIADKDFEQKSYVG 513



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 295 LKVDEFGRLVREGASDRD 348
           LKVDEFGRL++EG SD +
Sbjct: 534 LKVDEFGRLIKEGGSDSE 551


>KZM89474.1 hypothetical protein DCAR_023163 [Daucus carota subsp. sativus]
          Length = 1330

 Score = 48.5 bits (114), Expect(2) = 1e-06
 Identities = 29/76 (38%), Positives = 42/76 (55%)
 Frame = +3

Query: 18  ESEKGINLSSECVVACSGSMPSILLESSIELQGAAQKVDTASIVKAGQPEDNCHVNHESI 197
           ESE G   SSE V++   S+ S  L+SS+  +G +++VD   IVK  + EDN   N    
Sbjct: 447 ESEMGFGQSSEHVLSLPASLQSKTLDSSLGFRGPSREVDKTVIVKDKKSEDNRDANQLYF 506

Query: 198 TGGISDEAFQQKVIKG 245
              I+D+ F+QK   G
Sbjct: 507 NTEIADKDFEQKSYVG 522



 Score = 32.3 bits (72), Expect(2) = 1e-06
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 295 LKVDEFGRLVREGASDRD 348
           LKVDEFGRL++EG SD +
Sbjct: 543 LKVDEFGRLIKEGGSDSE 560


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