BLASTX nr result

ID: Panax24_contig00028088 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028088
         (429 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002266484.3 PREDICTED: uncharacterized protein LOC100246465 [...    51   1e-10
CBI28587.3 unnamed protein product, partial [Vitis vinifera]           51   4e-07
XP_016495557.1 PREDICTED: uncharacterized protein LOC107814626 [...    54   8e-06
XP_009619354.1 PREDICTED: uncharacterized protein LOC104111377 [...    54   8e-06

>XP_002266484.3 PREDICTED: uncharacterized protein LOC100246465 [Vitis vinifera]
          Length = 469

 Score = 51.2 bits (121), Expect(2) = 1e-10
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 85  RRANQTIRPGEELQKLKMIRDHLMKINK 2
           R ANQT RPGEEL+KLK+IRDHL+KINK
Sbjct: 88  RPANQTFRPGEELEKLKIIRDHLLKINK 115



 Score = 42.0 bits (97), Expect(2) = 1e-10
 Identities = 32/80 (40%), Positives = 38/80 (47%)
 Frame = -2

Query: 299 WPKIKNNWICFDXXXXXXXXXXXQAVRLETETLHTNSSNMMASSYCKISIFVISFC*FLC 120
           W K +N W  FD           Q   L  ET  T SSNM ASSYCKIS  +  F  FL 
Sbjct: 16  WTKTRNKWYYFDHRRRQHQCTQPQT-GLAEETTQTISSNM-ASSYCKISPIIPIFVSFLL 73

Query: 119 FSSVIIKNGQFPSSQSDNPA 60
            +S +       SS++D PA
Sbjct: 74  VASSVC---SVHSSETDRPA 90


>CBI28587.3 unnamed protein product, partial [Vitis vinifera]
          Length = 329

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 23/28 (82%), Positives = 26/28 (92%)
 Frame = -3

Query: 85  RRANQTIRPGEELQKLKMIRDHLMKINK 2
           R ANQT RPGEEL+KLK+IRDHL+KINK
Sbjct: 35  RPANQTFRPGEELEKLKIIRDHLLKINK 62



 Score = 30.0 bits (66), Expect(2) = 4e-07
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -2

Query: 179 MASSYCKISIFVISFC*FLCFSSVIIKNGQFPSSQSDNPA 60
           MASSYCKIS  +  F  FL  +S +       SS++D PA
Sbjct: 1   MASSYCKISPIIPIFVSFLLVASSVC---SVHSSETDRPA 37


>XP_016495557.1 PREDICTED: uncharacterized protein LOC107814626 [Nicotiana tabacum]
          Length = 448

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 100 KTDNFRRANQTIRPGEELQKLKMIRDHLMKINK 2
           +T+NF  ANQT +PG+ELQK+KMI+ HLMKINK
Sbjct: 74  ETENFHLANQTFKPGDELQKMKMIKSHLMKINK 106


>XP_009619354.1 PREDICTED: uncharacterized protein LOC104111377 [Nicotiana
           tomentosiformis]
          Length = 461

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = -3

Query: 100 KTDNFRRANQTIRPGEELQKLKMIRDHLMKINK 2
           +T+NF  ANQT +PG+ELQK+KMI+ HLMKINK
Sbjct: 74  ETENFHLANQTFKPGDELQKMKMIKSHLMKINK 106


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