BLASTX nr result

ID: Panax24_contig00028073 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00028073
         (449 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CBI35777.3 unnamed protein product, partial [Vitis vinifera]           57   2e-07
XP_010645213.1 PREDICTED: golgin subfamily A member 6-like prote...    57   7e-07
KVH91042.1 hypothetical protein Ccrd_006943 [Cynara cardunculus ...    55   2e-06
XP_017216724.1 PREDICTED: golgin subfamily A member 6-like prote...    54   7e-06
XP_017216723.1 PREDICTED: calcium-binding and coiled-coil domain...    54   7e-06

>CBI35777.3 unnamed protein product, partial [Vitis vinifera]
          Length = 138

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = +3

Query: 168 GQRASWISXXXXXXXXXXXXXKAKEETIKLLLAQLASMQKEKWRMEREADIFRQSLRIMS 347
           G+R +W +             KAKEETI++L A+LASM+KE+ + ERE DI RQSLRI+S
Sbjct: 61  GERLNWKAEEEDSIEDLHRELKAKEETIEVLKARLASMEKEEVQREREVDILRQSLRIIS 120


>XP_010645213.1 PREDICTED: golgin subfamily A member 6-like protein 1 isoform X1
           [Vitis vinifera] CAN67122.1 hypothetical protein
           VITISV_017486 [Vitis vinifera]
          Length = 224

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 30/60 (50%), Positives = 40/60 (66%)
 Frame = +3

Query: 168 GQRASWISXXXXXXXXXXXXXKAKEETIKLLLAQLASMQKEKWRMEREADIFRQSLRIMS 347
           G+R +W +             KAKEETI++L A+LASM+KE+ + ERE DI RQSLRI+S
Sbjct: 147 GERLNWKAEEEDSIEDLHRELKAKEETIEVLKARLASMEKEEVQREREVDILRQSLRIIS 206


>KVH91042.1 hypothetical protein Ccrd_006943 [Cynara cardunculus var. scolymus]
          Length = 210

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +3

Query: 168 GQRASWISXXXXXXXXXXXXXKAKEETIKLLLAQLASMQKEKWRMEREADIFRQSLRIMS 347
           G+  SW               KAKEETI+LL A +AS+++E+ R ERE DI RQSLRIMS
Sbjct: 133 GETESWREEEEYLTYELRRELKAKEETIELLQAHIASIEQEESRREREVDILRQSLRIMS 192


>XP_017216724.1 PREDICTED: golgin subfamily A member 6-like protein 2 isoform X2
           [Daucus carota subsp. sativus]
          Length = 228

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +3

Query: 231 KAKEETIKLLLAQLASMQKEKWRMEREADIFRQSLRIMS 347
           +AKE+TI+ L  QLAS +KEK RMEREADI RQS+RIM+
Sbjct: 171 EAKEDTIEALREQLASQEKEKSRMEREADILRQSMRIMT 209


>XP_017216723.1 PREDICTED: calcium-binding and coiled-coil domain-containing
           protein 2-like isoform X1 [Daucus carota subsp. sativus]
           KZM87171.1 hypothetical protein DCAR_024305 [Daucus
           carota subsp. sativus]
          Length = 229

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 27/39 (69%), Positives = 33/39 (84%)
 Frame = +3

Query: 231 KAKEETIKLLLAQLASMQKEKWRMEREADIFRQSLRIMS 347
           +AKE+TI+ L  QLAS +KEK RMEREADI RQS+RIM+
Sbjct: 172 EAKEDTIEALREQLASQEKEKSRMEREADILRQSMRIMT 210


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