BLASTX nr result

ID: Panax24_contig00027993 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027993
         (684 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017233317.1 PREDICTED: uncharacterized protein LOC108207378 [...    47   7e-08
KZM82285.1 hypothetical protein DCAR_029831 [Daucus carota subsp...    40   8e-06

>XP_017233317.1 PREDICTED: uncharacterized protein LOC108207378 [Daucus carota
           subsp. sativus]
          Length = 279

 Score = 46.6 bits (109), Expect(2) = 7e-08
 Identities = 23/39 (58%), Positives = 28/39 (71%)
 Frame = -3

Query: 325 ES*VKRSKTSAKNRASGALEGDKVKGTYIGVSISQLQHI 209
           E  +KRS T++ NR +GA  G K KGTY G SISQ+QHI
Sbjct: 78  EDWLKRSSTASSNRFAGADSGQKAKGTYKGGSISQMQHI 116



 Score = 38.1 bits (87), Expect(2) = 7e-08
 Identities = 17/29 (58%), Positives = 22/29 (75%)
 Frame = -2

Query: 128 EAQS*G*PIYWLDVYVANRDGLPEVVQIA 42
           E+QS G  I W+DVYVA RDGLP+ ++ A
Sbjct: 120 ESQSPGVSIDWVDVYVATRDGLPDAIKTA 148


>KZM82285.1 hypothetical protein DCAR_029831 [Daucus carota subsp. sativus]
          Length = 291

 Score = 40.0 bits (92), Expect(2) = 8e-06
 Identities = 22/39 (56%), Positives = 26/39 (66%)
 Frame = -3

Query: 325 ES*VKRSKTSAKNRASGALEGDKVKGTYIGVSISQLQHI 209
           E  +K S T++ NR +G   G K KGTY G SISQLQHI
Sbjct: 93  EDWLKMSSTASSNRLAG---GQKAKGTYKGGSISQLQHI 128



 Score = 37.7 bits (86), Expect(2) = 8e-06
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = -2

Query: 128 EAQS*G*PIYWLDVYVANRDGLPEVVQIA 42
           E+QS G  I W+DVYVA RDGLP+ +  A
Sbjct: 132 ESQSPGVSIDWVDVYVATRDGLPDAINTA 160


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