BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027907
         (609 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit ...   171   3e-51
EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative iso...   171   3e-51
XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   171   3e-51
EOY19811.1 DNA-directed RNA polymerase E subunit 1, putative iso...   171   3e-51
XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   176   3e-47
CBI40152.3 unnamed protein product, partial [Vitis vinifera]          176   3e-47
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   174   7e-47
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   174   7e-47
XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   174   9e-47
KJB67888.1 hypothetical protein B456_010G216600 [Gossypium raimo...   173   2e-46
KJB67890.1 hypothetical protein B456_010G216600 [Gossypium raimo...   173   2e-46
KJB67889.1 hypothetical protein B456_010G216600 [Gossypium raimo...   173   2e-46
XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46
XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46
XP_016754189.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46
XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46
XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46
KHG00588.1 DNA-directed RNA polymerase E subunit 1 -like protein...   173   2e-46
KDP40529.1 hypothetical protein JCGZ_24528 [Jatropha curcas]          173   2e-46
XP_012068654.1 PREDICTED: DNA-directed RNA polymerase V subunit ...   173   2e-46

>XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
           [Theobroma cacao]
          Length = 1788

 Score =  171 bits (433), Expect(2) = 3e-51
 Identities = 92/121 (76%), Positives = 98/121 (80%), Gaps = 4/121 (3%)
 Frame = -3

Query: 424 ICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIFINRPPTTHKCSL-- 251
           + + KLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI+FINRPPTTHK SL  
Sbjct: 367 LVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 426

Query: 250 LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWKLFSVVGKQLFSSHN 77
           LS+         INPLIC PLSADFDGD IHLFYP S   KAEV++LFS V KQL SSHN
Sbjct: 427 LSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS-VEKQLLSSHN 485

Query: 76  G 74
           G
Sbjct: 486 G 486



 Score = 58.9 bits (141), Expect(2) = 3e-51
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 540 SGFSSRSIMTSDPYKGVGEIGLPFEIAQRITFEEKV 433
           SGFSSR ++T DPYK V EIG+P EIAQRITFEE+V
Sbjct: 321 SGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERV 356


>EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative isoform 1
           [Theobroma cacao] EOY19810.1 DNA-directed RNA polymerase
           E subunit 1, putative isoform 1 [Theobroma cacao]
          Length = 1788

 Score =  171 bits (433), Expect(2) = 3e-51
 Identities = 92/121 (76%), Positives = 98/121 (80%), Gaps = 4/121 (3%)
 Frame = -3

Query: 424 ICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIFINRPPTTHKCSL-- 251
           + + KLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI+FINRPPTTHK SL  
Sbjct: 367 LVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 426

Query: 250 LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWKLFSVVGKQLFSSHN 77
           LS+         INPLIC PLSADFDGD IHLFYP S   KAEV++LFS V KQL SSHN
Sbjct: 427 LSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS-VEKQLLSSHN 485

Query: 76  G 74
           G
Sbjct: 486 G 486



 Score = 58.9 bits (141), Expect(2) = 3e-51
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 540 SGFSSRSIMTSDPYKGVGEIGLPFEIAQRITFEEKV 433
           SGFSSR ++T DPYK V EIG+P EIAQRITFEE+V
Sbjct: 321 SGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERV 356


>XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
           [Theobroma cacao]
          Length = 1786

 Score =  171 bits (433), Expect(2) = 3e-51
 Identities = 92/121 (76%), Positives = 98/121 (80%), Gaps = 4/121 (3%)
 Frame = -3

Query: 424 ICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIFINRPPTTHKCSL-- 251
           + + KLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI+FINRPPTTHK SL  
Sbjct: 365 LVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 424

Query: 250 LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWKLFSVVGKQLFSSHN 77
           LS+         INPLIC PLSADFDGD IHLFYP S   KAEV++LFS V KQL SSHN
Sbjct: 425 LSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS-VEKQLLSSHN 483

Query: 76  G 74
           G
Sbjct: 484 G 484



 Score = 58.9 bits (141), Expect(2) = 3e-51
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 540 SGFSSRSIMTSDPYKGVGEIGLPFEIAQRITFEEKV 433
           SGFSSR ++T DPYK V EIG+P EIAQRITFEE+V
Sbjct: 319 SGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERV 354


>EOY19811.1 DNA-directed RNA polymerase E subunit 1, putative isoform 3
           [Theobroma cacao]
          Length = 1675

 Score =  171 bits (433), Expect(2) = 3e-51
 Identities = 92/121 (76%), Positives = 98/121 (80%), Gaps = 4/121 (3%)
 Frame = -3

Query: 424 ICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIFINRPPTTHKCSL-- 251
           + + KLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI+FINRPPTTHK SL  
Sbjct: 367 LVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPTTHKHSLQA 426

Query: 250 LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWKLFSVVGKQLFSSHN 77
           LS+         INPLIC PLSADFDGD IHLFYP S   KAEV++LFS V KQL SSHN
Sbjct: 427 LSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEVFELFS-VEKQLLSSHN 485

Query: 76  G 74
           G
Sbjct: 486 G 486



 Score = 58.9 bits (141), Expect(2) = 3e-51
 Identities = 27/36 (75%), Positives = 31/36 (86%)
 Frame = -1

Query: 540 SGFSSRSIMTSDPYKGVGEIGLPFEIAQRITFEEKV 433
           SGFSSR ++T DPYK V EIG+P EIAQRITFEE+V
Sbjct: 321 SGFSSRGVITGDPYKKVNEIGIPSEIAQRITFEERV 356


>XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  176 bits (445), Expect = 3e-47
 Identities = 111/195 (56%), Positives = 124/195 (63%), Gaps = 19/195 (9%)
 Frame = -3

Query: 601 REPNDSSTKVWLEKMRTLF--------SFWVFLS*YYD**SI*RGG*NWFAF*NSSK--- 455
           +EPN+SSTK WLEKMRTLF        S  V     Y      R       F  + +   
Sbjct: 297 KEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK-----RVNEIGLPFEIAQRITF 351

Query: 454 ----NYF*GESESTICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIF 287
               N    +    + ++KLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDI+F
Sbjct: 352 EERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 411

Query: 286 INRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWK 119
           INRPPTTHK SL  LS+         INPLIC PLSADFDGD +HLFYP S   KAEV +
Sbjct: 412 INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLE 471

Query: 118 LFSVVGKQLFSSHNG 74
           LFS V KQL SSH+G
Sbjct: 472 LFS-VEKQLLSSHSG 485


>CBI40152.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1890

 Score =  176 bits (445), Expect = 3e-47
 Identities = 111/195 (56%), Positives = 124/195 (63%), Gaps = 19/195 (9%)
 Frame = -3

Query: 601 REPNDSSTKVWLEKMRTLF--------SFWVFLS*YYD**SI*RGG*NWFAF*NSSK--- 455
           +EPN+SSTK WLEKMRTLF        S  V     Y      R       F  + +   
Sbjct: 357 KEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK-----RVNEIGLPFEIAQRITF 411

Query: 454 ----NYF*GESESTICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIF 287
               N    +    + ++KLCLTYRDG STYSLREGSKGHTFLRPGQVVHRRIMDGDI+F
Sbjct: 412 EERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 471

Query: 286 INRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDAIHLFYP*SRPVKAEVWK 119
           INRPPTTHK SL  LS+         INPLIC PLSADFDGD +HLFYP S   KAEV +
Sbjct: 472 INRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEVLE 531

Query: 118 LFSVVGKQLFSSHNG 74
           LFS V KQL SSH+G
Sbjct: 532 LFS-VEKQLLSSHSG 545


>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
           carota subsp. sativus]
          Length = 1989

 Score =  174 bits (442), Expect = 7e-47
 Identities = 114/195 (58%), Positives = 128/195 (65%), Gaps = 17/195 (8%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RG------G*NWFAF*NSSKNYF 446
           IK+E N SSTKVWLEKMRTLF   +     +   SI  G      G     F  + +  F
Sbjct: 175 IKKEGN-SSTKVWLEKMRTLF---IRKGSGFSSRSIITGDPYKDVGEIGLPFEIAQRITF 230

Query: 445 *GESES-------TICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIF 287
             +           + +QKLCL Y+DGS+TYSLREGSKGHTFLRPGQVVHRRIMDGDI+F
Sbjct: 231 EEKVNQHNMMYLQKLVDQKLCLAYKDGSTTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 290

Query: 286 INRPPTTHKCSL----LSIIGI**RCINPLICAPLSADFDGDAIHLFYP*SRPVKAEVWK 119
           INRPPTTHK SL    + I       INPLICAPLSADFDGDAIHLFYP S   KAEV +
Sbjct: 291 INRPPTTHKHSLQALKVYIHDDHTVKINPLICAPLSADFDGDAIHLFYPQSLAAKAEVLE 350

Query: 118 LFSVVGKQLFSSHNG 74
           LFS V KQL SSH+G
Sbjct: 351 LFS-VEKQLLSSHSG 364


>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
           subsp. sativus] KZM90293.1 hypothetical protein
           DCAR_022342 [Daucus carota subsp. sativus]
          Length = 2116

 Score =  174 bits (442), Expect = 7e-47
 Identities = 114/195 (58%), Positives = 128/195 (65%), Gaps = 17/195 (8%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RG------G*NWFAF*NSSKNYF 446
           IK+E N SSTKVWLEKMRTLF   +     +   SI  G      G     F  + +  F
Sbjct: 302 IKKEGN-SSTKVWLEKMRTLF---IRKGSGFSSRSIITGDPYKDVGEIGLPFEIAQRITF 357

Query: 445 *GESES-------TICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIF 287
             +           + +QKLCL Y+DGS+TYSLREGSKGHTFLRPGQVVHRRIMDGDI+F
Sbjct: 358 EEKVNQHNMMYLQKLVDQKLCLAYKDGSTTYSLREGSKGHTFLRPGQVVHRRIMDGDIVF 417

Query: 286 INRPPTTHKCSL----LSIIGI**RCINPLICAPLSADFDGDAIHLFYP*SRPVKAEVWK 119
           INRPPTTHK SL    + I       INPLICAPLSADFDGDAIHLFYP S   KAEV +
Sbjct: 418 INRPPTTHKHSLQALKVYIHDDHTVKINPLICAPLSADFDGDAIHLFYPQSLAAKAEVLE 477

Query: 118 LFSVVGKQLFSSHNG 74
           LFS V KQL SSH+G
Sbjct: 478 LFS-VEKQLLSSHSG 491


>XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
           [Juglans regia]
          Length = 1932

 Score =  174 bits (441), Expect = 9e-47
 Identities = 108/193 (55%), Positives = 122/193 (63%), Gaps = 15/193 (7%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLF--------SFWVFLS*YY---D**SI*RGG*NWFAF*NS 461
           + +EPNDS+TK WLEK+RTLF        S  V     Y   D   I         F   
Sbjct: 297 LSKEPNDSTTKAWLEKIRTLFIRKGSGFSSRSVITGDAYKRVDEIGIPFEIAQMITF-EE 355

Query: 460 SKNYF*GESESTICEQKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDIIFIN 281
             N    +    + + KLCLTYRDGSS YSLREGSKGHTFLRPGQVVHRRIMDGD++FIN
Sbjct: 356 KVNVHNLKYLQELVDNKLCLTYRDGSSAYSLREGSKGHTFLRPGQVVHRRIMDGDMVFIN 415

Query: 280 RPPTTHKCSLLSIIGI**R----CINPLICAPLSADFDGDAIHLFYP*SRPVKAEVWKLF 113
           RPPTTHK SL ++           INPLIC PLSADFDGD +HLFYP S   KAEV +LF
Sbjct: 416 RPPTTHKHSLQALAVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEVLELF 475

Query: 112 SVVGKQLFSSHNG 74
           S V KQL SSH+G
Sbjct: 476 S-VDKQLLSSHSG 487


>KJB67888.1 hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>KJB67890.1 hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1841

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 286 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 325

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 326 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 385

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 386 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 445

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 446 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 476


>KJB67889.1 hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
           [Gossypium raimondii]
          Length = 1921

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Gossypium
           hirsutum]
          Length = 1957

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVHMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>XP_016754189.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Gossypium
           hirsutum]
          Length = 1963

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
           [Gossypium raimondii] KJB67887.1 hypothetical protein
           B456_010G216600 [Gossypium raimondii]
          Length = 1966

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Gossypium
           arboreum]
          Length = 1969

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>KHG00588.1 DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
           arboreum]
          Length = 1996

 Score =  173 bits (439), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           + ++ +DSSTK WLEKMRTLF                R G  +     SS++   G+   
Sbjct: 295 VNKDASDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDPYK 334

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLCLTYRDG STYSLREGSKGHTFL
Sbjct: 335 KVNEIGIPSEIAQRITFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFL 394

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGDI+FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 395 RPGQVVHRRIMDGDIVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 454

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           IHLFYP S   KAEV++LFS V KQL SSH+G
Sbjct: 455 IHLFYPQSLSAKAEVYELFS-VEKQLLSSHSG 485


>KDP40529.1 hypothetical protein JCGZ_24528 [Jatropha curcas]
          Length = 1821

 Score =  173 bits (438), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           I +E NDSSTK WLEKMRTLF                R G  +     SS++   G++  
Sbjct: 147 IHKESNDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDAYK 186

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLC+TYRDGSSTYSLR+GSKGHTFL
Sbjct: 187 RVNEIGIPFEIAQRITFEERVSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFL 246

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGD +FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 247 RPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 306

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           +HLFYP S   KAEV +LFS V KQL SSH+G
Sbjct: 307 VHLFYPQSLAAKAEVLELFS-VEKQLLSSHSG 337


>XP_012068654.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha
           curcas]
          Length = 1980

 Score =  173 bits (438), Expect = 2e-46
 Identities = 110/212 (51%), Positives = 124/212 (58%), Gaps = 34/212 (16%)
 Frame = -3

Query: 607 IKREPNDSSTKVWLEKMRTLFSFWVFLS*YYD**SI*RGG*NWFAF*NSSKNYF*GESES 428
           I +E NDSSTK WLEKMRTLF                R G  +     SS++   G++  
Sbjct: 306 IHKESNDSSTKAWLEKMRTLFI---------------RKGSGF-----SSRSVITGDAYK 345

Query: 427 TICE------------------------------QKLCLTYRDGSSTYSLREGSKGHTFL 338
            + E                               KLC+TYRDGSSTYSLR+GSKGHTFL
Sbjct: 346 RVNEIGIPFEIAQRITFEERVSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFL 405

Query: 337 RPGQVVHRRIMDGDIIFINRPPTTHKCSL--LSIIGI**RC--INPLICAPLSADFDGDA 170
           RPGQVVHRRIMDGD +FINRPPTTHK SL  LS+         INPLIC PLSADFDGD 
Sbjct: 406 RPGQVVHRRIMDGDTVFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDC 465

Query: 169 IHLFYP*SRPVKAEVWKLFSVVGKQLFSSHNG 74
           +HLFYP S   KAEV +LFS V KQL SSH+G
Sbjct: 466 VHLFYPQSLAAKAEVLELFS-VEKQLLSSHSG 496