BLASTX nr result

ID: Panax24_contig00027744 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027744
         (448 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019262478.1 PREDICTED: heat stress transcription factor A-6b-...    56   2e-06
XP_016486570.1 PREDICTED: heat stress transcription factor A-6b-...    54   6e-06
XP_016486569.1 PREDICTED: heat stress transcription factor A-6b-...    54   8e-06

>XP_019262478.1 PREDICTED: heat stress transcription factor A-6b-like [Nicotiana
           attenuata] OIT37771.1 heat stress transcription factor
           a-6b [Nicotiana attenuata]
          Length = 332

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 35/102 (34%)
 Frame = +3

Query: 6   FLARIIQNPSFVQQF----DTRKELVEAISNKGGN------------HVKLEPQDYGNVA 137
           FLA+ IQNP+FVQQ     D RKEL E I+ K               ++K E QDYG+V 
Sbjct: 207 FLAKAIQNPNFVQQIMQEKDKRKELEEEINKKRRRPIDQGPSNIENLNIKQELQDYGDVY 266

Query: 138 GFKERD-------------------VGQGFWEDLINGGIEED 206
           GF + +                   + +GFWEDL+N  I ED
Sbjct: 267 GFDDLELEEDDYVDQKAHIESGDKAINEGFWEDLLNENIGED 308


>XP_016486570.1 PREDICTED: heat stress transcription factor A-6b-like isoform X2
           [Nicotiana tabacum] XP_016486571.1 PREDICTED: heat
           stress transcription factor A-6b-like isoform X2
           [Nicotiana tabacum]
          Length = 248

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 35/102 (34%)
 Frame = +3

Query: 6   FLARIIQNPSFVQQF----DTRKELVEAISNKGGN-------------HVKLEPQDYGNV 134
           FLA+ IQNP+FVQQ     D RKEL E I+ K                ++K E QDYG+V
Sbjct: 120 FLAKAIQNPNFVQQIMQQKDKRKELEEEINKKRRRPIDQGPSNIIENLNIKQELQDYGDV 179

Query: 135 AGFKERDVGQ------------------GFWEDLINGGIEED 206
            GF + ++ +                  GFWEDL+N  I ED
Sbjct: 180 YGFDDLELEEDDYAEKAHTESGDKATNAGFWEDLLNENIGED 221


>XP_016486569.1 PREDICTED: heat stress transcription factor A-6b-like isoform X1
           [Nicotiana tabacum]
          Length = 336

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 35/102 (34%)
 Frame = +3

Query: 6   FLARIIQNPSFVQQF----DTRKELVEAISNKGGN-------------HVKLEPQDYGNV 134
           FLA+ IQNP+FVQQ     D RKEL E I+ K                ++K E QDYG+V
Sbjct: 208 FLAKAIQNPNFVQQIMQQKDKRKELEEEINKKRRRPIDQGPSNIIENLNIKQELQDYGDV 267

Query: 135 AGFKERDVGQ------------------GFWEDLINGGIEED 206
            GF + ++ +                  GFWEDL+N  I ED
Sbjct: 268 YGFDDLELEEDDYAEKAHTESGDKATNAGFWEDLLNENIGED 309


Top