BLASTX nr result

ID: Panax24_contig00027601 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027601
         (389 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017219481.1 PREDICTED: pre-rRNA-processing protein ESF1 [Dauc...    97   6e-21
KZM87590.1 hypothetical protein DCAR_024713 [Daucus carota subsp...    97   6e-21
KCW56588.1 hypothetical protein EUGRSUZ_I02314 [Eucalyptus grandis]    95   4e-20
XP_010029641.1 PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processi...    95   4e-20
XP_015889719.1 PREDICTED: pre-rRNA-processing protein esf1 [Zizi...    93   2e-19
XP_008337975.1 PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processi...    92   4e-19
CBI25928.3 unnamed protein product, partial [Vitis vinifera]           86   6e-19
CBI41120.3 unnamed protein product, partial [Vitis vinifera]           86   2e-18
KDO71325.1 hypothetical protein CISIN_1g005276mg [Citrus sinensis]     90   2e-18
XP_008393802.1 PREDICTED: pre-rRNA-processing protein esf1-like ...    90   2e-18
KDO71324.1 hypothetical protein CISIN_1g005276mg [Citrus sinensis]     90   2e-18
XP_006467008.1 PREDICTED: pre-rRNA-processing protein esf1 [Citr...    90   2e-18
XP_006425381.1 hypothetical protein CICLE_v10025027mg [Citrus cl...    90   2e-18
CDP01852.1 unnamed protein product [Coffea canephora]                  90   2e-18
XP_003608503.1 pre-rRNA-processing esf1-like protein [Medicago t...    89   3e-18
KVH92257.1 NUC153-like protein [Cynara cardunculus var. scolymus]      88   1e-17
OAY40022.1 hypothetical protein MANES_10G142700 [Manihot esculenta]    88   1e-17
EOY16537.1 Uncharacterized protein TCM_035334 isoform 1 [Theobro...    83   1e-17
XP_019182817.1 PREDICTED: pre-rRNA-processing protein ESF1 [Ipom...    87   1e-17
XP_008242028.1 PREDICTED: pre-rRNA-processing protein esf1 [Prun...    87   2e-17

>XP_017219481.1 PREDICTED: pre-rRNA-processing protein ESF1 [Daucus carota subsp.
           sativus]
          Length = 697

 Score = 97.1 bits (240), Expect = 6e-21
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = +3

Query: 237 VITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           VI+DPRFASV SDPRFQNPPKHKSKV IDSRFNRMFTDK+FTSSS RIDKR
Sbjct: 8   VISDPRFASVQSDPRFQNPPKHKSKVTIDSRFNRMFTDKNFTSSSTRIDKR 58


>KZM87590.1 hypothetical protein DCAR_024713 [Daucus carota subsp. sativus]
          Length = 734

 Score = 97.1 bits (240), Expect = 6e-21
 Identities = 46/51 (90%), Positives = 48/51 (94%)
 Frame = +3

Query: 237 VITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           VI+DPRFASV SDPRFQNPPKHKSKV IDSRFNRMFTDK+FTSSS RIDKR
Sbjct: 8   VISDPRFASVQSDPRFQNPPKHKSKVTIDSRFNRMFTDKNFTSSSTRIDKR 58


>KCW56588.1 hypothetical protein EUGRSUZ_I02314 [Eucalyptus grandis]
          Length = 692

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = +3

Query: 183 GADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFT 362
           G + A   G G  G    VITD RFASVHSDPRFQ  PKHK+KVAIDSRFNRMF+DKSF+
Sbjct: 25  GHESAAGGGSGGAGGGAKVITDSRFASVHSDPRFQRVPKHKAKVAIDSRFNRMFSDKSFS 84

Query: 363 SSSIRIDKR 389
           SS+  +DKR
Sbjct: 85  SSAAPLDKR 93


>XP_010029641.1 PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processing protein esf1
           [Eucalyptus grandis]
          Length = 722

 Score = 94.7 bits (234), Expect = 4e-20
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = +3

Query: 183 GADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFT 362
           G + A   G G  G    VITD RFASVHSDPRFQ  PKHK+KVAIDSRFNRMF+DKSF+
Sbjct: 25  GHESAAGGGSGGAGGGAKVITDSRFASVHSDPRFQRVPKHKAKVAIDSRFNRMFSDKSFS 84

Query: 363 SSSIRIDKR 389
           SS+  +DKR
Sbjct: 85  SSAAPLDKR 93


>XP_015889719.1 PREDICTED: pre-rRNA-processing protein esf1 [Ziziphus jujuba]
          Length = 726

 Score = 92.8 bits (229), Expect = 2e-19
 Identities = 43/56 (76%), Positives = 47/56 (83%)
 Frame = +3

Query: 222 GNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           G    +ITDPRFASVHSDPRFQ  P HKSKV+IDSRFNRMFTDKSFT+SS  +DKR
Sbjct: 40  GGGNKIITDPRFASVHSDPRFQKVPMHKSKVSIDSRFNRMFTDKSFTTSSAPVDKR 95


>XP_008337975.1 PREDICTED: LOW QUALITY PROTEIN: pre-rRNA-processing protein
           esf1-like [Malus domestica]
          Length = 697

 Score = 92.0 bits (227), Expect = 4e-19
 Identities = 42/58 (72%), Positives = 50/58 (86%)
 Frame = +3

Query: 216 SHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           S G+++N+I DPRF+SVH DPRFQN PKHK+KV IDSRFNRMFTDK F+SSS  +DKR
Sbjct: 11  SKGDDENIIADPRFSSVHWDPRFQNVPKHKAKVEIDSRFNRMFTDKRFSSSSAPLDKR 68


>CBI25928.3 unnamed protein product, partial [Vitis vinifera]
          Length = 155

 Score = 86.3 bits (212), Expect = 6e-19
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = +3

Query: 183 GADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFT 362
           GA+  R   GG       ++TD RF+S+HSDPRFQ  PKHK+KV IDSRFNRMF DKSFT
Sbjct: 59  GAEDRRSKNGGK------IVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFT 112

Query: 363 SSSIRIDKR 389
           SSS  +DKR
Sbjct: 113 SSSAPLDKR 121


>CBI41120.3 unnamed protein product, partial [Vitis vinifera]
          Length = 193

 Score = 86.3 bits (212), Expect = 2e-18
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = +3

Query: 183 GADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFT 362
           GA+  R   GG       ++TD RF+S+HSDPRFQ  PKHK+KV IDSRFNRMF DKSFT
Sbjct: 16  GAEDRRSKNGGK------IVTDARFSSLHSDPRFQKVPKHKTKVEIDSRFNRMFHDKSFT 69

Query: 363 SSSIRIDKR 389
           SSS  +DKR
Sbjct: 70  SSSAPLDKR 78


>KDO71325.1 hypothetical protein CISIN_1g005276mg [Citrus sinensis]
          Length = 610

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +3

Query: 198 RVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIR 377
           R   G  +  N+ +ITD RFASVHSDPRFQN PK KSKVAIDSRF+RMFTDK+F SS+  
Sbjct: 12  RSKDGSDNNKNKKIITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAP 71

Query: 378 IDKR 389
            DKR
Sbjct: 72  FDKR 75


>XP_008393802.1 PREDICTED: pre-rRNA-processing protein esf1-like [Malus domestica]
          Length = 704

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 41/58 (70%), Positives = 50/58 (86%)
 Frame = +3

Query: 216 SHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           S G+++N+I DPRF+SVH DPRFQN PKHK+KV IDSRF+RMFTDK F+SSS  +DKR
Sbjct: 16  SKGDDENIIADPRFSSVHWDPRFQNVPKHKAKVEIDSRFDRMFTDKRFSSSSAPLDKR 73


>KDO71324.1 hypothetical protein CISIN_1g005276mg [Citrus sinensis]
          Length = 704

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +3

Query: 198 RVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIR 377
           R   G  +  N+ +ITD RFASVHSDPRFQN PK KSKVAIDSRF+RMFTDK+F SS+  
Sbjct: 12  RSKDGSDNNKNKKIITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAP 71

Query: 378 IDKR 389
            DKR
Sbjct: 72  FDKR 75


>XP_006467008.1 PREDICTED: pre-rRNA-processing protein esf1 [Citrus sinensis]
          Length = 706

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +3

Query: 198 RVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIR 377
           R   G  +  N+ +ITD RFASVHSDPRFQN PK KSKVAIDSRF+RMFTDK+F SS+  
Sbjct: 14  RSKDGSDNNKNKKIITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAP 73

Query: 378 IDKR 389
            DKR
Sbjct: 74  FDKR 77


>XP_006425381.1 hypothetical protein CICLE_v10025027mg [Citrus clementina]
           ESR38621.1 hypothetical protein CICLE_v10025027mg
           [Citrus clementina]
          Length = 708

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = +3

Query: 198 RVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIR 377
           R   G  +  N+ +ITD RFASVHSDPRFQN PK KSKVAIDSRF+RMFTDK+F SS+  
Sbjct: 16  RSKDGSDNNKNKKIITDSRFASVHSDPRFQNVPKQKSKVAIDSRFDRMFTDKNFASSTAP 75

Query: 378 IDKR 389
            DKR
Sbjct: 76  FDKR 79


>CDP01852.1 unnamed protein product [Coffea canephora]
          Length = 713

 Score = 90.1 bits (222), Expect = 2e-18
 Identities = 40/58 (68%), Positives = 48/58 (82%)
 Frame = +3

Query: 216 SHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           +H N+  +ITD RFAS+H+DPRF+ PPKHK+KVAIDSRFNRMFTDK F +S  R DKR
Sbjct: 21  NHRNDGKIITDARFASLHTDPRFREPPKHKAKVAIDSRFNRMFTDKDFATSKARTDKR 78


>XP_003608503.1 pre-rRNA-processing esf1-like protein [Medicago truncatula]
           AES90700.1 pre-rRNA-processing esf1-like protein
           [Medicago truncatula]
          Length = 737

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 41/73 (56%), Positives = 53/73 (72%)
 Frame = +3

Query: 171 RDNNGADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTD 350
           +  + +  +  S   SH N++ VI DPRFA VH+DPRF+ PPKH++KV+IDSRFNRMFT 
Sbjct: 27  KGKDNSSNSNKSDKPSHSNDKEVIEDPRFAMVHTDPRFREPPKHQTKVSIDSRFNRMFTH 86

Query: 351 KSFTSSSIRIDKR 389
           KSF  SS  +DKR
Sbjct: 87  KSFLPSSAPVDKR 99


>KVH92257.1 NUC153-like protein [Cynara cardunculus var. scolymus]
          Length = 717

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 41/65 (63%), Positives = 52/65 (80%)
 Frame = +3

Query: 195 ARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSI 374
           A+V+G    G+   VITD RFA+   DPRFQ+ PKHK+KVAIDSRF+RMFTDK+F++SS 
Sbjct: 22  AKVAGNRVFGSGNKVITDERFAASQKDPRFQDVPKHKNKVAIDSRFSRMFTDKNFSTSSA 81

Query: 375 RIDKR 389
           R+DKR
Sbjct: 82  RVDKR 86


>OAY40022.1 hypothetical protein MANES_10G142700 [Manihot esculenta]
          Length = 746

 Score = 87.8 bits (216), Expect = 1e-17
 Identities = 41/56 (73%), Positives = 46/56 (82%)
 Frame = +3

Query: 222 GNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           G  + +I DPRFASVHSDPRFQ   K KSKVAIDSRFNRMFTDK+F SSS ++DKR
Sbjct: 37  GGGRKIIADPRFASVHSDPRFQKVTKQKSKVAIDSRFNRMFTDKNFASSSAKLDKR 92


>EOY16537.1 Uncharacterized protein TCM_035334 isoform 1 [Theobroma cacao]
           EOY16538.1 Uncharacterized protein TCM_035334 isoform 1
           [Theobroma cacao] EOY16539.1 Uncharacterized protein
           TCM_035334 isoform 1 [Theobroma cacao]
          Length = 171

 Score = 83.2 bits (204), Expect = 1e-17
 Identities = 41/65 (63%), Positives = 50/65 (76%)
 Frame = +3

Query: 195 ARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSI 374
           ++ +G GS      +ITD RFAS+HSDPRFQ  PKHK+KV IDSRFNRMF+DK F+SSS 
Sbjct: 31  SKKNGSGSG----KIITDARFASLHSDPRFQKVPKHKTKVVIDSRFNRMFSDKRFSSSSA 86

Query: 375 RIDKR 389
            +DKR
Sbjct: 87  PLDKR 91


>XP_019182817.1 PREDICTED: pre-rRNA-processing protein ESF1 [Ipomoea nil]
           XP_019182818.1 PREDICTED: pre-rRNA-processing protein
           ESF1 [Ipomoea nil]
          Length = 722

 Score = 87.4 bits (215), Expect = 1e-17
 Identities = 40/72 (55%), Positives = 49/72 (68%)
 Frame = +3

Query: 174 DNNGADGARVSGGGSHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDK 353
           D     GA    GGS  +   +I DPRFAS+H+DPRF+  PKHKSKV +DSRFN +FTDK
Sbjct: 19  DAGAGAGAAAFRGGSQQSGSKIIKDPRFASIHTDPRFRKAPKHKSKVVLDSRFNHIFTDK 78

Query: 354 SFTSSSIRIDKR 389
           +F S+   IDKR
Sbjct: 79  NFASAKAGIDKR 90


>XP_008242028.1 PREDICTED: pre-rRNA-processing protein esf1 [Prunus mume]
          Length = 694

 Score = 87.0 bits (214), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = +3

Query: 216 SHGNNQNVITDPRFASVHSDPRFQNPPKHKSKVAIDSRFNRMFTDKSFTSSSIRIDKR 389
           S G+++N+ITD RF+SVH DPRFQN PKHK+KV IDSRF+RMF+DK F SSS+ +DKR
Sbjct: 17  SKGSDENLITDSRFSSVHWDPRFQNVPKHKAKVEIDSRFDRMFSDKRFGSSSVPLDKR 74


Top