BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027519
         (3205 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017219634.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1463   0.0  
CDP02357.1 unnamed protein product [Coffea canephora]                1446   0.0  
XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1442   0.0  
KZM89220.1 hypothetical protein DCAR_026295 [Daucus carota subsp...  1434   0.0  
XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1413   0.0  
XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1412   0.0  
NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mito...  1410   0.0  
NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mit...  1409   0.0  
XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1408   0.0  
BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [...  1407   0.0  
XP_018816698.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1407   0.0  
XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1406   0.0  
XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1406   0.0  
XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1405   0.0  
XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus pe...  1398   0.0  
XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1396   0.0  
XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1396   0.0  
XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1396   0.0  
XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B, chloro...  1394   0.0  
XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chlorop...  1392   0.0  

>XP_017219634.1 PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Daucus carota subsp.
            sativus]
          Length = 1017

 Score = 1463 bits (3788), Expect = 0.0
 Identities = 748/1024 (73%), Positives = 841/1024 (82%), Gaps = 10/1024 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVVLLIHLNSTVMWRNIARKV---SPRFS-SLKAK-P 328
            MF++K P SFGI    F  +   T ++    +   M RNI RKV   SPRFS S K +  
Sbjct: 1    MFTTKPPISFGIKTTTFDQLASDTHLVCAE-SPGGMLRNITRKVVFASPRFSGSFKVQFS 59

Query: 329  SLSTYS---LSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRPN 499
            SL T S     G S S+   +  K R ++     +    E+GF      L +D  F R +
Sbjct: 60   SLGTSSNCGFLGCSSSVFYGEFDKYRPFEGGYWSREGFLEMGFFG----LRKDRIFSRND 115

Query: 500  CSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGY-RKSWRQQSV 676
              FNGL  +SY SVAE +A                +ELL E+  E +RGY R  WRQ+  
Sbjct: 116  VGFNGLGLRSYGSVAENVAVSGTDCEEEGNEV---EELLNELKKEDRRGYQRMRWRQKKS 172

Query: 677  DVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEP 856
            + G   +KY+KLR+RQVKIETEAWVQAV+EYR ++KEMC++ LAPNLPYMKSLFLGWFEP
Sbjct: 173  EGG---FKYQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEP 229

Query: 857  FTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAA 1036
             TNKI+E QE+CR GKN++SYAPYFDQLPADMM+VITMHK+MGLLM G G G ARVV+AA
Sbjct: 230  LTNKISEVQEVCRLGKNKASYAPYFDQLPADMMAVITMHKVMGLLMAGGGQGTARVVQAA 289

Query: 1037 CAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDA-SNVVTHEQEKLRKIVTNAMKKQKP 1213
            CA+GEAI+QE+RIHNFLE+T+ KK  +D + EEDA S++ T E+ KLRK V N +KKQK 
Sbjct: 290  CAVGEAIDQEIRIHNFLEKTKNKKAKKDARKEEDAASDIATIEEGKLRKTVNNLIKKQKL 349

Query: 1214 HVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTS 1393
              VR I+KGQD +KPWTPDA+AKVGSRLIELLLQ+AYIQPP D  A+GPPDIRPAF+HT 
Sbjct: 350  QTVRAIIKGQDPTKPWTPDAKAKVGSRLIELLLQSAYIQPPADQFAEGPPDIRPAFVHTF 409

Query: 1394 QYVIKVTKESRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTS 1573
              V + +KE++ YGVI+CDP+I  GL++TVRHMVIPYMPMLVPP+KWTGYDKG HLFL S
Sbjct: 410  ISVTE-SKETKRYGVIQCDPVIRSGLDKTVRHMVIPYMPMLVPPVKWTGYDKGAHLFLPS 468

Query: 1574 YVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLAD 1753
            YVMRIRGARQQREA+KRAPKKQLE VFEALDTLG+TKWRV+K VL V+DRIW SGG LAD
Sbjct: 469  YVMRIRGARQQREAIKRAPKKQLEFVFEALDTLGNTKWRVHKTVLNVVDRIWNSGGRLAD 528

Query: 1754 LVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEG 1933
            LVDR+D+PLPEQPDTEDEAV+            ENRERHSQRCDIELKLSVAR+++DEEG
Sbjct: 529  LVDRDDLPLPEQPDTEDEAVVKQWKWKIKKVKKENRERHSQRCDIELKLSVARRLRDEEG 588

Query: 1934 FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGV 2113
            FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGL WLKIHLANL+AGGV
Sbjct: 589  FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGV 648

Query: 2114 DKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPET 2293
            DKLS++GRI FTE+HLD+IFDSADKPLEG+RWWLKAEDPFQCLAVCINLSEALRSSSPET
Sbjct: 649  DKLSHDGRIAFTESHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLSEALRSSSPET 708

Query: 2294 TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQ 2473
            TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIA GEPADVYSGIAARVL I+++DA+
Sbjct: 709  TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIAGGEPADVYSGIAARVLKIVQDDAK 768

Query: 2474 KDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAEL 2653
            KDPATF +A+ AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG+I DDAEL
Sbjct: 769  KDPATFSEAVCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIEDDAEL 828

Query: 2654 FGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKF 2833
            F AACY A+VTLTALGEMFEAARSIM+WLG+CAKIIASENQPVRW TPLGLPVVQPYRKF
Sbjct: 829  FRAACYAARVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKF 888

Query: 2834 GRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGV 3013
            GRHHI+TSLQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAG NFAGV
Sbjct: 889  GRHHIRTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 948

Query: 3014 HDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKD 3193
            HDSYWTHACDVDEMNRILREKFVELYE PILENLLE FQ+           ERGDF+LKD
Sbjct: 949  HDSYWTHACDVDEMNRILREKFVELYERPILENLLEGFQKSFPTLCFPPLPERGDFELKD 1008

Query: 3194 VLES 3205
            VLES
Sbjct: 1009 VLES 1012


>CDP02357.1 unnamed protein product [Coffea canephora]
          Length = 1040

 Score = 1446 bits (3742), Expect = 0.0
 Identities = 749/1036 (72%), Positives = 821/1036 (79%), Gaps = 22/1036 (2%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVP--VTKPTVVLLIHLN-STVMWRNIARKVSPR------FSSL 316
            M S+K P S  IN     P  V KP + LL     STVMW+NIA+ VS R      F S+
Sbjct: 1    MSSTKSPISLNINIGRLTPNPVYKPRIFLLKPPEISTVMWKNIAKLVSSRTLRTQEFGSI 60

Query: 317  KAKPSLS-TYSLSGLS-DSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFG 490
                SL  TYS  G S DSI P K  K    D + C  N   E GF ++ E   RDEF  
Sbjct: 61   FNPHSLPRTYSFLGFSQDSIFPEKF-KFSTLDFNPCSGNGFLEQGFRKVGEFSTRDEFLA 119

Query: 491  RPNCSF-------NGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQ--ELLREMGNEAKR 643
            RP+ +F       NGL  KSYAS+AE IA                +  ELL EM  E +R
Sbjct: 120  RPSLNFARNQISINGLSQKSYASLAEAIAVSSTDVEEDTSVVAADEVHELLSEMKKEDRR 179

Query: 644  GYRKSWRQQSVDV-GMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLP 820
                 WR+    V GM   KY  L+RRQVKIETEAW QA  EY+ ++ +MCE KLAPNLP
Sbjct: 180  QMSFRWRKHHRAVYGMGSKKYHALKRRQVKIETEAWEQAANEYKELLNDMCEHKLAPNLP 239

Query: 821  YMKSLFLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTG 1000
            YMKSLFLGWFEP  +KI E+QELCR  K++++YA YF QLPADMMSVITMHKLMGLLMTG
Sbjct: 240  YMKSLFLGWFEPLCSKIAEEQELCRLRKSKAAYAKYFHQLPADMMSVITMHKLMGLLMTG 299

Query: 1001 EGYGCARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRK 1180
              +G ARVV AAC IG+AIEQE+RIH FLE+T+KKKV ++ K E D +  V  EQEKLR+
Sbjct: 300  GEHGSARVVPAACLIGDAIEQEIRIHKFLEKTKKKKVNEEMKMEGDMTTSVIQEQEKLRR 359

Query: 1181 IVTNAMKKQKPHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGP 1360
             VTN MKKQK HVV+ IVKGQDDSKPW+ + +AKVGSRLIELLLQTAYIQ P D LAD P
Sbjct: 360  TVTNLMKKQKLHVVQQIVKGQDDSKPWSTEVKAKVGSRLIELLLQTAYIQSPADQLADCP 419

Query: 1361 PDIRPAFIHTSQYVIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWT 1537
            PDIRPAFIHT + V   TK  SR YG+I+CDPL+ KGLERT RHMVIPYMPMLVPP+KWT
Sbjct: 420  PDIRPAFIHTFRTVTNNTKSPSRRYGIIQCDPLVLKGLERTARHMVIPYMPMLVPPVKWT 479

Query: 1538 GYDKGGHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVI 1717
            GYDKGGHLFL SYVMR  GARQQREA+KRAP  QL PV+EALDTLG+TKWRVNKRVL+V+
Sbjct: 480  GYDKGGHLFLPSYVMRTHGARQQREAVKRAPINQLRPVYEALDTLGNTKWRVNKRVLSVV 539

Query: 1718 DRIWTSGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELK 1897
            DRIW SGG L +LVDR DI LPE+P+TEDEA+L            EN ERHSQRCDIELK
Sbjct: 540  DRIWASGGRLGNLVDRNDIALPEEPETEDEAILRKWKWKVKSIKKENSERHSQRCDIELK 599

Query: 1898 LSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWL 2077
            L+VAR+MKDE GFFYPHNLDFRGRAYP+HPHLNHLGSDVCRG+LEFAEGRPLGKSGL WL
Sbjct: 600  LAVARRMKDEGGFFYPHNLDFRGRAYPMHPHLNHLGSDVCRGMLEFAEGRPLGKSGLHWL 659

Query: 2078 KIHLANLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCIN 2257
            KIHLANLFA GVDKLS+E RI FTENHL++IFDSAD+PLEG+RWWL AEDPFQCLAVCIN
Sbjct: 660  KIHLANLFANGVDKLSHEARIAFTENHLEDIFDSADRPLEGRRWWLNAEDPFQCLAVCIN 719

Query: 2258 LSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIA 2437
            LSEALRS SPETTISHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIA
Sbjct: 720  LSEALRSQSPETTISHIPVHQDGSCNGLQHYAALGRDKLGASAVNLVAGEKPADVYSGIA 779

Query: 2438 ARVLDIIKNDAQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 2617
            ARVLDI+K DAQKDPA FPDALRAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL
Sbjct: 780  ARVLDIMKRDAQKDPAVFPDALRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRL 839

Query: 2618 KERGAISDDAELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTP 2797
            KERGAI+DDAELFGAACY AKVTLTAL EMFEAARSIM+WLGECAK+IASENQ VRW TP
Sbjct: 840  KERGAIADDAELFGAACYAAKVTLTALEEMFEAARSIMSWLGECAKVIASENQTVRWMTP 899

Query: 2798 LGLPVVQPYRKFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 2977
            LGLPVVQPYR+ GRH IKTSLQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV
Sbjct: 900  LGLPVVQPYRQLGRHLIKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAV 959

Query: 2978 ACKKAGFNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXX 3157
            AC+KAG NFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLE FQ+        
Sbjct: 960  ACRKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLEDFQKTFPSLSFP 1019

Query: 3158 XXXERGDFDLKDVLES 3205
               ERGDFDLKDVL+S
Sbjct: 1020 ALPERGDFDLKDVLDS 1035


>XP_010660553.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] CBI16911.3 unnamed protein product,
            partial [Vitis vinifera]
          Length = 1035

 Score = 1442 bits (3734), Expect = 0.0
 Identities = 730/1032 (70%), Positives = 829/1032 (80%), Gaps = 18/1032 (1%)
 Frame = +2

Query: 164  MFSSKIP---NSFGINFDPFVPVTKPTVVLLIHLNS-TVMWRNIARKVSPRFSS----LK 319
            M S K P    + G + D  +   KPT      L   TVMWRNIA++  PR       L 
Sbjct: 1    MSSGKTPILSANLGRDLDLIISFEKPTNFRPNPLKKPTVMWRNIAKRAIPRAPRKCVYLD 60

Query: 320  AKPSLSTYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRPN 499
            ++P    YS  G S  +I  +++K   ++ SSC  +  +E+GF R+ EI  R++  GRP+
Sbjct: 61   SQPLSRRYSFLGFSQDLIFPEIMKFGTFEPSSCSSSGFSEMGFRRIGEISSREDAVGRPS 120

Query: 500  -------CSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYRKS 658
                     F+G CPKSYASVAE ++                QELL EM  E KR     
Sbjct: 121  FGCLRNQMGFSGFCPKSYASVAEAVSSTDVEEDVSASDEI--QELLGEMKKEEKRQVNFK 178

Query: 659  WRQQ-SVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSL 835
             R++  ++ GM   +Y +LRRRQVKIETEAW  A KEY+ ++ +MCEQKLAPNLPYMKSL
Sbjct: 179  RREKLKMERGMEQGRYLRLRRRQVKIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSL 238

Query: 836  FLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGC 1015
            FLGWFEP  + I ++QELCR GKN+++YAPYFDQLPADMMSVITMHKL+GLLMTG  +G 
Sbjct: 239  FLGWFEPLRDAIVKEQELCRLGKNKAAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGS 298

Query: 1016 ARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNA 1195
             RVV+AAC IG+AIEQEVRIHNFLE+T++KKV +D   E    + V HEQEKLRK VTN 
Sbjct: 299  TRVVQAACVIGDAIEQEVRIHNFLEKTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNL 358

Query: 1196 MKKQKPHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDH-LADGPPDIR 1372
            MKKQK H  R IVKG D+SKPW P+A+AKVGSRLIELL+QTAYIQPP+D+ LAD PPDIR
Sbjct: 359  MKKQKLHAARQIVKGHDNSKPWGPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIR 418

Query: 1373 PAFIHTSQYVIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDK 1549
            PAF+HT + V++  K+  R +GVI+CDPL+ KGLERT RHMVIPY+PMLVPP+KWTGYDK
Sbjct: 419  PAFVHTFKTVMREAKKIGRRFGVIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDK 478

Query: 1550 GGHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIW 1729
            G HLFL SYVMR  GARQQREA+KRAP+ QLEPVFEAL+TLG+TKWR+NKR+  V+DRIW
Sbjct: 479  GAHLFLPSYVMRTHGARQQREAVKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIW 538

Query: 1730 TSGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVA 1909
              GG LADLVDR D+PLPE+PDTEDEA L             N ERHSQRCDIELKL+VA
Sbjct: 539  AGGGCLADLVDRNDVPLPEKPDTEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVA 598

Query: 1910 RKMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHL 2089
            RKMKDE+GFFYPHNLDFRGRAYP+HP+LNHLGSD+CRGILEFAEGRPLG SGL WLKIHL
Sbjct: 599  RKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHL 658

Query: 2090 ANLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEA 2269
            ANLFAGGVDKLS+EGRITFTENHLD+IFDSAD+PLEGKRWWL AEDPFQ LA CINLSEA
Sbjct: 659  ANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEA 718

Query: 2270 LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVL 2449
            LRSSSPETTISHIPVHQDGSCNGLQHYAALGRD+LGA AVNL+A  +PADVYSGIAARVL
Sbjct: 719  LRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVL 778

Query: 2450 DIIKNDAQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG 2629
            DI+K DA+KDPA FPDALRARIL+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKER 
Sbjct: 779  DIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERN 838

Query: 2630 AISDDAELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLP 2809
            AI+DD ELFGAACY AK+TLTALGEMF+AARSIM+WLG+CAKIIASENQPVRWTTPLGLP
Sbjct: 839  AIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLP 898

Query: 2810 VVQPYRKFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKK 2989
            VVQPYRK GRH IKTSLQ LTLQR TE +MVKRQRTAFPPNFVHSLDGSHMMMTA+ACKK
Sbjct: 899  VVQPYRKLGRHLIKTSLQVLTLQRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKK 958

Query: 2990 AGFNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXE 3169
            AG NFAGVHDSYWTHACDVDEMNR+LREKFV+LYETPILENLLESFQ+           E
Sbjct: 959  AGLNFAGVHDSYWTHACDVDEMNRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPE 1018

Query: 3170 RGDFDLKDVLES 3205
            RGDFDL++VLES
Sbjct: 1019 RGDFDLREVLES 1030


>KZM89220.1 hypothetical protein DCAR_026295 [Daucus carota subsp. sativus]
          Length = 990

 Score = 1434 bits (3712), Expect = 0.0
 Identities = 731/994 (73%), Positives = 823/994 (82%), Gaps = 10/994 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVVLLIHLNSTVMWRNIARKV---SPRFS-SLKAK-P 328
            MF++K P SFGI    F  +   T ++    +   M RNI RKV   SPRFS S K +  
Sbjct: 1    MFTTKPPISFGIKTTTFDQLASDTHLVCAE-SPGGMLRNITRKVVFASPRFSGSFKVQFS 59

Query: 329  SLSTYS---LSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRPN 499
            SL T S     G S S+   +  K R ++     +    E+GF      L +D  F R +
Sbjct: 60   SLGTSSNCGFLGCSSSVFYGEFDKYRPFEGGYWSREGFLEMGFFG----LRKDRIFSRND 115

Query: 500  CSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGY-RKSWRQQSV 676
              FNGL  +SY SVAE +A                +ELL E+  E +RGY R  WRQ+  
Sbjct: 116  VGFNGLGLRSYGSVAENVAVSGTDCEEEGNEV---EELLNELKKEDRRGYQRMRWRQKKS 172

Query: 677  DVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEP 856
            + G   +KY+KLR+RQVKIETEAWVQAV+EYR ++KEMC++ LAPNLPYMKSLFLGWFEP
Sbjct: 173  EGG---FKYQKLRKRQVKIETEAWVQAVREYRNLLKEMCDRSLAPNLPYMKSLFLGWFEP 229

Query: 857  FTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAA 1036
             TNKI+E QE+CR GKN++SYAPYFDQLPADMM+VITMHK+MGLLM G G G ARVV+AA
Sbjct: 230  LTNKISEVQEVCRLGKNKASYAPYFDQLPADMMAVITMHKVMGLLMAGGGQGTARVVQAA 289

Query: 1037 CAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDA-SNVVTHEQEKLRKIVTNAMKKQKP 1213
            CA+GEAI+QE+RIHNFLE+T+ KK  +D + EEDA S++ T E+ KLRK V N +KKQK 
Sbjct: 290  CAVGEAIDQEIRIHNFLEKTKNKKAKKDARKEEDAASDIATIEEGKLRKTVNNLIKKQKL 349

Query: 1214 HVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTS 1393
              VR I+KGQD +KPWTPDA+AKVGSRLIELLLQ+AYIQPP D  A+GPPDIRPAF+HT 
Sbjct: 350  QTVRAIIKGQDPTKPWTPDAKAKVGSRLIELLLQSAYIQPPADQFAEGPPDIRPAFVHTF 409

Query: 1394 QYVIKVTKESRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTS 1573
              V + +KE++ YGVI+CDP+I  GL++TVRHMVIPYMPMLVPP+KWTGYDKG HLFL S
Sbjct: 410  ISVTE-SKETKRYGVIQCDPVIRSGLDKTVRHMVIPYMPMLVPPVKWTGYDKGAHLFLPS 468

Query: 1574 YVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLAD 1753
            YVMRIRGARQQREA+KRAPKKQLE VFEALDTLG+TKWRV+K VL V+DRIW SGG LAD
Sbjct: 469  YVMRIRGARQQREAIKRAPKKQLEFVFEALDTLGNTKWRVHKTVLNVVDRIWNSGGRLAD 528

Query: 1754 LVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEG 1933
            LVDR+D+PLPEQPDTEDEAV+            ENRERHSQRCDIELKLSVAR+++DEEG
Sbjct: 529  LVDRDDLPLPEQPDTEDEAVVKQWKWKIKKVKKENRERHSQRCDIELKLSVARRLRDEEG 588

Query: 1934 FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGV 2113
            FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGL WLKIHLANL+AGGV
Sbjct: 589  FFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGV 648

Query: 2114 DKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPET 2293
            DKLS++GRI FTE+HLD+IFDSADKPLEG+RWWLKAEDPFQCLAVCINLSEALRSSSPET
Sbjct: 649  DKLSHDGRIAFTESHLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLSEALRSSSPET 708

Query: 2294 TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQ 2473
            TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIA GEPADVYSGIAARVL I+++DA+
Sbjct: 709  TISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIAGGEPADVYSGIAARVLKIVQDDAK 768

Query: 2474 KDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAEL 2653
            KDPATF +A+ AR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIK+RLKERG+I DDAEL
Sbjct: 769  KDPATFSEAVCARNLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKKRLKERGSIEDDAEL 828

Query: 2654 FGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKF 2833
            F AACY A+VTLTALGEMFEAARSIM+WLG+CAKIIASENQPVRW TPLGLPVVQPYRKF
Sbjct: 829  FRAACYAARVTLTALGEMFEAARSIMSWLGDCAKIIASENQPVRWITPLGLPVVQPYRKF 888

Query: 2834 GRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGV 3013
            GRHHI+TSLQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAG NFAGV
Sbjct: 889  GRHHIRTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGV 948

Query: 3014 HDSYWTHACDVDEMNRILREKFVELYETPILENL 3115
            HDSYWTHACDVDEMNRILREKFVELYE PILEN+
Sbjct: 949  HDSYWTHACDVDEMNRILREKFVELYERPILENV 982


>XP_011085577.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 1032

 Score = 1413 bits (3658), Expect = 0.0
 Identities = 719/1028 (69%), Positives = 816/1028 (79%), Gaps = 14/1028 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPF-VPVTKPTVVLLIHLNSTVMWRNIARKVSPRFSSLKAKPSLST 340
            M SSK P SFG   D    P  KP ++L  + +  VMWRNI ++VS R + LK   +  +
Sbjct: 1    MSSSKTPISFGFKIDNSRTPFHKPVLILNPYRDCRVMWRNIVKQVSSR-TPLKLCRNSES 59

Query: 341  YS-----LSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFF---GRP 496
             S     L    +S  P K      ++L+S P     ELGF ++ +   RDEF     R 
Sbjct: 60   LSRTCSFLGSAQESAFPDKFKFRPLFELNSRPTFCFPELGFQKLGDFSSRDEFSPFPARN 119

Query: 497  NCSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXX----QELLREMGNEAKRGYRKSWR 664
              ++NGLC KSYASVAE +A                    QELL E+  E +R Y   WR
Sbjct: 120  QINWNGLCFKSYASVAEAVAVSQTDLVEENSVNVSVADEVQELLNEVRKEERRQYWTRWR 179

Query: 665  QQSVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLG 844
            Q+    GM   +Y+ LRRRQVKIETEAW QA KEYR ++ +MCEQKLAPNLPYMKSLFLG
Sbjct: 180  QRRSVRGMGNERYKALRRRQVKIETEAWGQAAKEYRELLNDMCEQKLAPNLPYMKSLFLG 239

Query: 845  WFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARV 1024
            WFEP  NKI E+QE  R+GK++++YA YFD LPADMM+VITMHKLMGLLMTG  +GCARV
Sbjct: 240  WFEPLRNKIAEEQEFIRKGKSKAAYAKYFDLLPADMMAVITMHKLMGLLMTGGEHGCARV 299

Query: 1025 VKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKK 1204
            V+AAC IG+AIEQEVRI  FLE+T+KKKV ++T+ E +  +    EQEKL + VT  +KK
Sbjct: 300  VQAACIIGDAIEQEVRIQYFLEKTKKKKVQKNTEKEGEEFDGNNQEQEKLHQRVTMLIKK 359

Query: 1205 QKPHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFI 1384
            QK   VR +V  Q + +PW  DA+AKVGS LIEL+LQTAYIQPP +   +GPPDIRPAF+
Sbjct: 360  QKLQAVRQLVNRQIEYQPWGQDAKAKVGSHLIELILQTAYIQPPANQSTEGPPDIRPAFV 419

Query: 1385 HTSQYVIKVTK-ESRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHL 1561
            HT + V K TK  S+ YGVI+CDPL+ KGLERT RHMVIPYMPMLVPP+KWTGYDKG +L
Sbjct: 420  HTMRTVTKETKTSSKRYGVIQCDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDKGAYL 479

Query: 1562 FLTSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGG 1741
            +L SYVMR  GARQQRE++KRAP +QL+PVFEALDTLGST+WRVNKRVL++IDRIW SGG
Sbjct: 480  YLPSYVMRTHGARQQRESVKRAPTEQLKPVFEALDTLGSTRWRVNKRVLSIIDRIWASGG 539

Query: 1742 HLADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMK 1921
             L DLVDR DIPLPE+PDTEDEA+L            EN ERHS RCD ELKL+VARKMK
Sbjct: 540  CLGDLVDRSDIPLPERPDTEDEALLKKWKWKVKSIKKENSERHSIRCDTELKLAVARKMK 599

Query: 1922 DEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLF 2101
            +EEGFFYPHNLDFRGRAYP+HPHLNHLGSD+CRGILEF+EGRPLGKSGL+WLKIHLANLF
Sbjct: 600  EEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFSEGRPLGKSGLRWLKIHLANLF 659

Query: 2102 AGGVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSS 2281
            A GVDKLS+EGR+ FTENHLD+I DSAD+PLEGKRWWL AEDPFQCLA CINL+EALRS 
Sbjct: 660  ANGVDKLSHEGRLAFTENHLDDIIDSADRPLEGKRWWLNAEDPFQCLAACINLAEALRSP 719

Query: 2282 SPETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIK 2461
            SPETTISHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVL I+K
Sbjct: 720  SPETTISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLKIMK 779

Query: 2462 NDAQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISD 2641
            +DAQKDPA FPDALRAR+L+NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+D
Sbjct: 780  DDAQKDPAVFPDALRARLLINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIAD 839

Query: 2642 DAELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQP 2821
            DAELFGAACY AK+TLTALG+MFEAARSIM WLGECAKIIASEN+PV WTTPLGLPVVQP
Sbjct: 840  DAELFGAACYAAKITLTALGQMFEAARSIMTWLGECAKIIASENEPVCWTTPLGLPVVQP 899

Query: 2822 YRKFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFN 3001
            YRK GRH IKTSLQ LTLQR +EKVMVKRQRTAFPPNFVHSLDGSHMMMTA+ACKKAG N
Sbjct: 900  YRKVGRHLIKTSLQVLTLQRESEKVMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLN 959

Query: 3002 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDF 3181
            FAGVHDSYWTHACDVDEMNRILREKFVELYE PILENLLE FQ+           +RGDF
Sbjct: 960  FAGVHDSYWTHACDVDEMNRILREKFVELYEAPILENLLEGFQQSFPSLTFPPLPDRGDF 1019

Query: 3182 DLKDVLES 3205
            DLK+VL+S
Sbjct: 1020 DLKEVLQS 1027


>XP_009619460.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1412 bits (3656), Expect = 0.0
 Identities = 724/1023 (70%), Positives = 817/1023 (79%), Gaps = 9/1023 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVV-LLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRPNC----- 502
            TYS  G     +     K R     SC    +   GF  + E LP DEF  RP       
Sbjct: 59   TYSFLGFGQDSVFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLLKSQVN 115

Query: 503  SFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQSVD 679
            S +  C KSYASVAE +A                QELL E+  E K+ +  +  +Q+ + 
Sbjct: 116  SNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLT 175

Query: 680  VGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPF 859
             GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP 
Sbjct: 176  SGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPL 235

Query: 860  TNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAAC 1039
             +KI E+QELC QGK++++YA Y  QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA 
Sbjct: 236  RDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAAL 295

Query: 1040 AIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHV 1219
             IG+AIEQEVRIHNFLE+T+K+K  +D K +ED  +V T EQEKLRK VTN MKKQK   
Sbjct: 296  VIGDAIEQEVRIHNFLEKTKKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRA 353

Query: 1220 VRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQY 1399
            V  IV+ QDDSKPW  DA+AKVGSRLIELLLQTAYIQPP + LA  PPDIRPAF+H+ + 
Sbjct: 354  VGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRT 413

Query: 1400 VIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSY 1576
            V K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SY
Sbjct: 414  VAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSY 473

Query: 1577 VMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADL 1756
            VMR  GARQQREA+KRA + QL+PVFEALDTLGSTKWR+NKRVL+V+DRIW  GG LADL
Sbjct: 474  VMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADL 533

Query: 1757 VDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGF 1936
            VDR+D PLPE+PDTEDEA+             ENRERHSQRCDIELKL+VARKMKDEEGF
Sbjct: 534  VDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGF 593

Query: 1937 FYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVD 2116
            FYPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLG+SGL+WLKIHLANLFAGGV+
Sbjct: 594  FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVE 653

Query: 2117 KLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETT 2296
            KLS EGRI FTENH+D+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET+
Sbjct: 654  KLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETS 713

Query: 2297 ISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQK 2476
            ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+
Sbjct: 714  ISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQR 773

Query: 2477 DPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELF 2656
            DPA FPDA+RAR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELF
Sbjct: 774  DPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 833

Query: 2657 GAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFG 2836
            GAACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK G
Sbjct: 834  GAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 893

Query: 2837 RHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVH 3016
            RH IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAGVH
Sbjct: 894  RHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVH 953

Query: 3017 DSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDV 3196
            DSYWTHACDVD++NRILREKFVELYETPILE LLESFQ            ERGDFDL+DV
Sbjct: 954  DSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDV 1013

Query: 3197 LES 3205
            LES
Sbjct: 1014 LES 1016


>NP_001289520.1 DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
            sylvestris] Q8VWF8.2 RecName: Full=DNA-directed RNA
            polymerase 2, chloroplastic/mitochondrial; AltName:
            Full=NsRpoT-B; AltName: Full=T7 bacteriophage-type single
            subunit RNA polymerase 2; Flags: Precursor CAC82575.2
            phage-type RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score = 1410 bits (3651), Expect = 0.0
 Identities = 720/1022 (70%), Positives = 816/1022 (79%), Gaps = 8/1022 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVV-LLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP----NCS 505
            TYS  G     I     K R     SC    +   GF  + E LP DEF  RP      +
Sbjct: 59   TYSFLGFGQDSIFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLIKNQVN 115

Query: 506  FNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQSVDV 682
             N  C KSYASVAE +A                 ELL E+  E K+ +  +  +Q+ +  
Sbjct: 116  NNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTS 175

Query: 683  GMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFT 862
            GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  
Sbjct: 176  GMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLR 235

Query: 863  NKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACA 1042
            +KI E+QELC QGK++++YA YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  
Sbjct: 236  DKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALV 295

Query: 1043 IGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVV 1222
            IG+AIEQEVRIHNFLE+T+K+K  +D K +ED  +V T EQEKLRK VTN MKKQK   V
Sbjct: 296  IGDAIEQEVRIHNFLEKTKKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAV 353

Query: 1223 RNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYV 1402
              IV+ QDDSKPW  DARAKVGSRLI+LLLQTAYIQPP + LA  PPDIRPAF+H+ + V
Sbjct: 354  GQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTV 413

Query: 1403 IKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYV 1579
             K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYV
Sbjct: 414  AKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYV 473

Query: 1580 MRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLV 1759
            MR  GARQQREA+KRA + QL+PVFEALDTLG+TKWR+NKRVL+V+DRIW  GG LADLV
Sbjct: 474  MRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLV 533

Query: 1760 DREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFF 1939
            DR+D PLPE+PDTEDEA+             ENRERHSQRCDIELKL+VARKMKDEE FF
Sbjct: 534  DRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFF 593

Query: 1940 YPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDK 2119
            YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLG+SGL+WLKIHLANLFAGGV+K
Sbjct: 594  YPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEK 653

Query: 2120 LSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTI 2299
            LS EGRI FTENH+D+IFDS+DKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET++
Sbjct: 654  LSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSV 713

Query: 2300 SHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKD 2479
            SHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+D
Sbjct: 714  SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRD 773

Query: 2480 PATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFG 2659
            PA FPDA+RAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFG
Sbjct: 774  PAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFG 833

Query: 2660 AACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGR 2839
            AACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK GR
Sbjct: 834  AACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGR 893

Query: 2840 HHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHD 3019
            H IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAGVHD
Sbjct: 894  HLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHD 953

Query: 3020 SYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVL 3199
            SYWTHACDVD++NRILREKFVELYE PILE LLESFQ            ERGDFD++DVL
Sbjct: 954  SYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVL 1013

Query: 3200 ES 3205
            ES
Sbjct: 1014 ES 1015


>NP_001311818.1 DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial
            [Nicotiana tabacum] Q8L6J3.2 RecName: Full=DNA-directed
            RNA polymerase 2B, chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            CAC95020.1 mitochondrial and chloroplast RNA polymerase
            [Nicotiana tabacum]
          Length = 1021

 Score = 1409 bits (3646), Expect = 0.0
 Identities = 723/1023 (70%), Positives = 816/1023 (79%), Gaps = 9/1023 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVV-LLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLDINRYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRPNC----- 502
            TYS  G     +     K R     SC    +   GF  + E LP DEF  RP       
Sbjct: 59   TYSFLGFGQDSVFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLLKNQVN 115

Query: 503  SFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQSVD 679
            S +  C KSYASVAE +A                QELL E+  E K+ +  +  +Q+ + 
Sbjct: 116  SNDFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVQELLTELKKEEKKQFAFRRRKQRMLT 175

Query: 680  VGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPF 859
             GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP 
Sbjct: 176  SGMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPL 235

Query: 860  TNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAAC 1039
             +KI E+QELC QGK++++YA Y  QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA 
Sbjct: 236  RDKIAEEQELCSQGKSKAAYAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAAL 295

Query: 1040 AIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHV 1219
             IG+AIEQEVRIHNFLE+T+K+K  +D K +ED  +V T EQEKLRK VTN MKKQK   
Sbjct: 296  VIGDAIEQEVRIHNFLEKTKKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRA 353

Query: 1220 VRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQY 1399
            V  IV+ QDDSKPW  DA+AKVGSRLIELLLQTAYIQPP + LA  PPDIRPAF+H+ + 
Sbjct: 354  VGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRT 413

Query: 1400 VIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSY 1576
            V K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SY
Sbjct: 414  VAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSY 473

Query: 1577 VMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADL 1756
            VMR  GARQQREA+KRA + QL+PVFEALDTLGSTKWR+NKRVL+VIDRIW  GG LADL
Sbjct: 474  VMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADL 533

Query: 1757 VDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGF 1936
            VDR+D PLPE+PDTEDEA+             ENRERHSQRCDIELKL+VARKMKDEEGF
Sbjct: 534  VDRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGF 593

Query: 1937 FYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVD 2116
            FYPHN+DFRGRAYP+HPHLNHLGSD+CRG+L FAEGRPLG+SGL+WLKIHLANLFAGGV+
Sbjct: 594  FYPHNVDFRGRAYPMHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVE 653

Query: 2117 KLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETT 2296
            KLS EGRI FTENH+D+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET+
Sbjct: 654  KLSLEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETS 713

Query: 2297 ISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQK 2476
            ISHIPVHQDGSCNGLQHYAALGRD+LGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+
Sbjct: 714  ISHIPVHQDGSCNGLQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQR 773

Query: 2477 DPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELF 2656
            DPA FPDA+RAR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELF
Sbjct: 774  DPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELF 833

Query: 2657 GAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFG 2836
            GAACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK G
Sbjct: 834  GAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIG 893

Query: 2837 RHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVH 3016
            RH IKTSLQ LTLQ+ TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAGVH
Sbjct: 894  RHLIKTSLQILTLQQETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVH 953

Query: 3017 DSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDV 3196
            DSYWTHACDVD++NRILREKFVELYETPILE LLESFQ            ERGDFDL+DV
Sbjct: 954  DSYWTHACDVDKLNRILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDV 1013

Query: 3197 LES 3205
            LES
Sbjct: 1014 LES 1016


>XP_016445194.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Nicotiana tabacum]
          Length = 1020

 Score = 1408 bits (3644), Expect = 0.0
 Identities = 721/1022 (70%), Positives = 815/1022 (79%), Gaps = 8/1022 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVV-LLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP---NCSF 508
            TYS  G     +     K R     SC    +   GF  + E LP DEF  RP   N   
Sbjct: 59   TYSFLGFGQDSVFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLIKNQVN 115

Query: 509  NGLC-PKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQSVDV 682
            N  C  KSYASVAE +A                 ELL E+  E K+ +  +  +Q+ +  
Sbjct: 116  NNFCWRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTS 175

Query: 683  GMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFT 862
            GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  
Sbjct: 176  GMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLR 235

Query: 863  NKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACA 1042
            +KI E+QELC QGK++++YA YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  
Sbjct: 236  DKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALV 295

Query: 1043 IGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVV 1222
            IG+AIEQEVRIHNFLE+T+K+K  +D K +ED  +V T EQEKLRK VTN MKKQK   V
Sbjct: 296  IGDAIEQEVRIHNFLEKTKKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAV 353

Query: 1223 RNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYV 1402
              IV+ QDDSKPW  DARAKVGSRLI+LLLQTAYIQPP + LA  PPDIRPAF+H+ + V
Sbjct: 354  GQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTV 413

Query: 1403 IKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYV 1579
             K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYV
Sbjct: 414  AKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYV 473

Query: 1580 MRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLV 1759
            MR  GARQQREA+KRA + QL+PVFEALDTLG+TKWR+NKRVL+V+DRIW  GG LADLV
Sbjct: 474  MRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLV 533

Query: 1760 DREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFF 1939
            DR+D PLPE+PDTEDEA+             ENRERHSQRCDIELKL+VARKMKDEE FF
Sbjct: 534  DRDDAPLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFF 593

Query: 1940 YPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDK 2119
            YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLG SGL+WLKIHLANLFAGGV+K
Sbjct: 594  YPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGVSGLRWLKIHLANLFAGGVEK 653

Query: 2120 LSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTI 2299
            LS EGRI FTENH+D+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET++
Sbjct: 654  LSLEGRIGFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSV 713

Query: 2300 SHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKD 2479
            SHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVLDI+K DAQ+D
Sbjct: 714  SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRD 773

Query: 2480 PATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFG 2659
            PA FPDA+RAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFG
Sbjct: 774  PAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFG 833

Query: 2660 AACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGR 2839
            AACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK GR
Sbjct: 834  AACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGR 893

Query: 2840 HHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHD 3019
            H IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAGVHD
Sbjct: 894  HLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHD 953

Query: 3020 SYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVL 3199
            SYWTHACDVD++NRILREKFVELYE PILE LLESFQ            ERGDFD++DVL
Sbjct: 954  SYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVL 1013

Query: 3200 ES 3205
            ES
Sbjct: 1014 ES 1015


>BAB78464.1 T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] BAB78465.1 T7 bacteriophage-type single
            subunit RNA polymerase [Nicotiana sylvestris]
          Length = 1020

 Score = 1407 bits (3642), Expect = 0.0
 Identities = 718/1022 (70%), Positives = 815/1022 (79%), Gaps = 8/1022 (0%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVV-LLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLDINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP----NCS 505
            TYS  G     I     K R     SC    +   GF  + E LP DEF  RP      +
Sbjct: 59   TYSFLGFGQDSIFKDNTKFRSLIPISCSNIVM---GFQNLGEYLPGDEFLSRPLIKNQVN 115

Query: 506  FNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQSVDV 682
             N  C KSYASVAE +A                 ELL E+  E K+ +  +  +Q+ +  
Sbjct: 116  NNFCCRKSYASVAEAVAVSSTDAEEDVSVVDEVHELLTELKKEEKKQFAFRRRKQRMLTS 175

Query: 683  GMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFT 862
            GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCEQKLAPNLPY+KSLFLGWFEP  
Sbjct: 176  GMGHRKYQTLKRRQVKVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLR 235

Query: 863  NKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACA 1042
            +KI E+QELC QGK++++YA YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+AA  
Sbjct: 236  DKIAEEQELCSQGKSKAAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALV 295

Query: 1043 IGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVV 1222
            IG+AIEQEVRIHNFLE+T+K+K  +D K +ED  +V T EQEKLRK VTN MKKQK   V
Sbjct: 296  IGDAIEQEVRIHNFLEKTKKQKAEKD-KQKEDGEHV-TQEQEKLRKKVTNLMKKQKLRAV 353

Query: 1223 RNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYV 1402
              IV+ QDDSKPW  DARAKVGSRLI+LLLQTAYIQPP + LA  PPDI PAF+H+ + V
Sbjct: 354  GQIVRRQDDSKPWGQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTV 413

Query: 1403 IKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYV 1579
             K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L SYV
Sbjct: 414  AKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYV 473

Query: 1580 MRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLV 1759
            MR  GARQQREA+KRA + QL+PVFEALDTLG+TKWR+NKRVL+V+DRIW  GG LADLV
Sbjct: 474  MRTHGARQQREAVKRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLV 533

Query: 1760 DREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFF 1939
            DR+D PLPE+PDTEDEA+L            ENRERHSQRCDIELKL+VARKMKDEE FF
Sbjct: 534  DRDDAPLPEEPDTEDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFF 593

Query: 1940 YPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDK 2119
            YPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFAEGRPLG+SGL+WLKIHLANLFAGGV+K
Sbjct: 594  YPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEK 653

Query: 2120 LSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTI 2299
            LS EGRI FTENH+D+IFDS+DKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPET++
Sbjct: 654  LSLEGRIGFTENHMDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSV 713

Query: 2300 SHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKD 2479
            SHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PA+ YSGIAARVLDI+K DAQ+D
Sbjct: 714  SHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRD 773

Query: 2480 PATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFG 2659
            PA FPDA+RAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+ELFG
Sbjct: 774  PAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFG 833

Query: 2660 AACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGR 2839
            AACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK GR
Sbjct: 834  AACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGR 893

Query: 2840 HHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHD 3019
            H IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAGVHD
Sbjct: 894  HLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHD 953

Query: 3020 SYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVL 3199
            SYWTHACDVD++NRILREKFVELYE PILE LLESFQ            ERGDFD++DVL
Sbjct: 954  SYWTHACDVDKLNRILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVL 1013

Query: 3200 ES 3205
            ES
Sbjct: 1014 ES 1015


>XP_018816698.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Juglans regia]
          Length = 999

 Score = 1407 bits (3641), Expect = 0.0
 Identities = 704/995 (70%), Positives = 803/995 (80%), Gaps = 16/995 (1%)
 Frame = +2

Query: 269  MWRNIARKVSPRFSS--LKAKPSLSTYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAEL 442
            MW NIA++   +  S  L +      +S  G +   I  +  + R  +L++C  N  +E+
Sbjct: 1    MWSNIAKRAISKSQSFVLNSHSLRRVHSFLGRTQDPIFPEEFRYRPSELNACWDNGFSEM 60

Query: 443  GFSRMAEILPRDEFFGRPNCSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLRE 622
            G+ R  E    ++F  RP+   +G CP+ YAS+AE                   QELL+E
Sbjct: 61   GYHRHDEFFSHEDFMRRPSFGISGFCPRGYASLAEAEVVSSTDVEEDVSVAEEVQELLQE 120

Query: 623  MGNEAKR--GYRKSWRQQSVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCE 796
            M  E KR   YR+  RQQ +  GM   KY  LRRRQVKIETEAW QA KEY+ ++  MC 
Sbjct: 121  MSKEEKRQVDYRRR-RQQKMARGMGQGKYHLLRRRQVKIETEAWEQAAKEYKELLMVMCA 179

Query: 797  QKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHK 976
            QKLAPNLPYMKSLFLGWFEP  + I ++Q+LCR GKN+ +YAPYF+QLPADMMSVITMHK
Sbjct: 180  QKLAPNLPYMKSLFLGWFEPLRDAIEKEQQLCRNGKNKRAYAPYFEQLPADMMSVITMHK 239

Query: 977  LMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVT 1156
            L GLLMTG  +G ARVV+AAC IG+AIEQEVRIH FLE+T++KK  +D ++E   SN + 
Sbjct: 240  LTGLLMTGGEHGAARVVQAACMIGDAIEQEVRIHKFLEKTKQKKGNEDKENEGGDSNSLI 299

Query: 1157 HEQEKL-----------RKIVTNAMKKQKPHVVRNIVKGQDDSKPWTPDARAKVGSRLIE 1303
             EQE+L           RK VTN MKKQK   VR IVKG+DDSKPW  DA+AKVGSRLIE
Sbjct: 300  KEQEELLIKKKGEQEELRKKVTNLMKKQKLVAVRQIVKGKDDSKPWGQDAKAKVGSRLIE 359

Query: 1304 LLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKVTKE-SRSYGVIKCDPLIHKGLERT 1480
            LL+QTAYIQPP + LADGPPDIRPAF+H+ + V+K  K+ SR YG+I+C+PL+ KGLERT
Sbjct: 360  LLMQTAYIQPPANQLADGPPDIRPAFVHSFRTVMKEGKKRSRRYGIIECNPLVLKGLERT 419

Query: 1481 VRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFEA 1660
            VRHMVIPYMPMLVPP+KWTGYDKGGHLFL SY+MR  G+R QREA+KRAP+KQLEPVFEA
Sbjct: 420  VRHMVIPYMPMLVPPVKWTGYDKGGHLFLPSYIMRTHGSRHQREAVKRAPRKQLEPVFEA 479

Query: 1661 LDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXXX 1840
            L+TLG TKWR+NKRVL+++DRIW SGGHLADLVDR D+PLP +PDTEDEA L        
Sbjct: 480  LNTLGYTKWRINKRVLSIVDRIWASGGHLADLVDRNDVPLPNEPDTEDEAQLKKWKWRVK 539

Query: 1841 XXXXENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCR 2020
                ENRERHSQRCDIELKL+VARKMKDEEGFFYPHNLDFRGRAYP+HP+LNHLGSD+CR
Sbjct: 540  SLKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCR 599

Query: 2021 GILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLEG 2200
            GILEFA GRPLGKSGL+WLKIHLANL+AGGVDKLS+EGRI FTENHLD+IFDS D+PLEG
Sbjct: 600  GILEFAAGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRIAFTENHLDDIFDSTDRPLEG 659

Query: 2201 KRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGA 2380
            KRWWL AEDPFQ LAVC+N+++ALRSSSPET +SHIPVHQDGSCNGLQHYAALGRDKLGA
Sbjct: 660  KRWWLNAEDPFQFLAVCMNITDALRSSSPETFVSHIPVHQDGSCNGLQHYAALGRDKLGA 719

Query: 2381 DAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVDRKLVKQTVM 2560
             AVNL+A  +PADVYSGIA RVL+I++ DAQKDP  FPDAL ARIL+NQVDRKLVKQTVM
Sbjct: 720  VAVNLVAGEKPADVYSGIAVRVLEIMRKDAQKDPTVFPDALHARILINQVDRKLVKQTVM 779

Query: 2561 TSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAKVTLTALGEMFEAARSIMNWL 2740
            TSVYGVTYIGARDQIKRRLKERGAI+DDAELFGA+CY AK TLTALGEMFEAARSIM+WL
Sbjct: 780  TSVYGVTYIGARDQIKRRLKERGAIADDAELFGASCYAAKTTLTALGEMFEAARSIMSWL 839

Query: 2741 GECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKTSLQTLTLQRATEKVMVKRQRTA 2920
            GECAKIIASENQ V+WTTPLGLPVVQPYR  GRH IKTSLQ L+LQR TEKVMVKRQRTA
Sbjct: 840  GECAKIIASENQTVQWTTPLGLPVVQPYRNLGRHLIKTSLQILSLQRETEKVMVKRQRTA 899

Query: 2921 FPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTHACDVDEMNRILREKFVELYETP 3100
            FPPNF+HSLDGSHMM TA+ACKKAG NFAGVHDSYWTHACDVDEM+RILREKFVELYETP
Sbjct: 900  FPPNFIHSLDGSHMMKTAIACKKAGLNFAGVHDSYWTHACDVDEMSRILREKFVELYETP 959

Query: 3101 ILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
            ILENLLESFQ+           ERGDFDL+DVLES
Sbjct: 960  ILENLLESFQQSFPTLSFPSLPERGDFDLRDVLES 994


>XP_019185406.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Ipomoea nil]
          Length = 1034

 Score = 1406 bits (3640), Expect = 0.0
 Identities = 712/1031 (69%), Positives = 806/1031 (78%), Gaps = 17/1031 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVVLL-IHLNSTVMWRNIARKVSPRFSSL-------K 319
            M  +K P S  + FD F+   KP+   L +   S  MWRNIA+++S +           K
Sbjct: 1    MSHTKAPISVSVKFDRFID--KPSAKALNLCSYSPAMWRNIAKQISSKALQKHNLSLNPK 58

Query: 320  AKPSLSTYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP- 496
            ++ + ++  LS    S  P KL++   +D   C  N   E GF +  E LPRDEF  RP 
Sbjct: 59   SRYNRTSSFLSFPQGSNFPEKLVQFSPFDPVPCSNNGSTEFGFRKFGEFLPRDEFLSRPV 118

Query: 497  ------NCSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYRKS 658
                  +   +G   KSYASVAE +                 +ELL EM  E ++ +   
Sbjct: 119  LHSLMSSGYISGFSWKSYASVAEAVEVLSSEAEENVSVTDEVEELLTEMRREERKQFYCE 178

Query: 659  WRQ-QSVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSL 835
            WR+ Q V  GM  WKY+ L+RRQ+KIETEAW +A KEY+ ++++MC QKLAPNLPYMKSL
Sbjct: 179  WRKRQRVSRGMGRWKYQALKRRQIKIETEAWEKAAKEYKELLEDMCAQKLAPNLPYMKSL 238

Query: 836  FLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGC 1015
            FLGWFEP  NKI E+ EL   GK +++Y  YF QLPADMM+VITMHKLMGLLM G  +G 
Sbjct: 239  FLGWFEPLHNKIAEEHELYLAGKTKATYFKYFSQLPADMMAVITMHKLMGLLMAGGEFGA 298

Query: 1016 ARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNA 1195
             +VV  ACAIG+AIEQEVRI+  LE+T + K+ +D K E +    VT  +EKL+K V N 
Sbjct: 299  GKVVHIACAIGDAIEQEVRIYKILEKTRQSKINKDAKMEGEDHEGVTEGKEKLKKKVANL 358

Query: 1196 MKKQKPHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRP 1375
            +KKQ    VR IV GQD  KPW  DA+AKVGS LIEL+LQTAYIQPP D  ADGPPD+RP
Sbjct: 359  IKKQNLRAVRRIVGGQDAFKPWGQDAKAKVGSHLIELVLQTAYIQPPADQFADGPPDVRP 418

Query: 1376 AFIHTSQYVIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKG 1552
            AFIHT + V    K  SR YGVI+CDPL+ KGLE+T RHMVIPYMPMLVPPIKW GYDKG
Sbjct: 419  AFIHTFRTVTNQAKGGSRRYGVIQCDPLVLKGLEKTARHMVIPYMPMLVPPIKWKGYDKG 478

Query: 1553 GHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWT 1732
             HL+L SY+MR  GARQQREA+KRAP+KQLEPVFEALDTLGST+WR+NKRVL+V+DRIW 
Sbjct: 479  AHLYLPSYIMRTHGARQQREAVKRAPRKQLEPVFEALDTLGSTRWRINKRVLSVVDRIWA 538

Query: 1733 SGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVAR 1912
            SGG LADLVDR+DIPLPE+PDTEDE VL            ENRERHSQRCDIELKL+VA 
Sbjct: 539  SGGRLADLVDRDDIPLPEEPDTEDETVLKKWKWKVKAVKKENRERHSQRCDIELKLAVAH 598

Query: 1913 KMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLA 2092
             MKDEEGFFYPHNLDFRGRAYP+HPHLNHLGSD+CRGILEFAEGRPLGKSGL WLKIHLA
Sbjct: 599  NMKDEEGFFYPHNLDFRGRAYPMHPHLNHLGSDICRGILEFAEGRPLGKSGLCWLKIHLA 658

Query: 2093 NLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEAL 2272
            NL+A GV+KLS EGR+ FTENHLD+IFDSAD+PLEGKRWWLKAEDPFQ LAVCINLSEAL
Sbjct: 659  NLYAAGVEKLSLEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQLLAVCINLSEAL 718

Query: 2273 RSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLD 2452
            RSSSPE TISH+PVHQDGSCNGLQHYAALGRDKLGA +VNL+A  +PADVYSGIAARVLD
Sbjct: 719  RSSSPEMTISHVPVHQDGSCNGLQHYAALGRDKLGAVSVNLVAGEKPADVYSGIAARVLD 778

Query: 2453 IIKNDAQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 2632
            I+K DAQ+DPA FPDALRAR+LV+QVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA
Sbjct: 779  IMKRDAQRDPAEFPDALRARVLVDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGA 838

Query: 2633 ISDDAELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPV 2812
            I DD+ELFGAACY AKVTLTALGEMF+AARSIM+WLGECAK+IASEN PVRWTTPLGLPV
Sbjct: 839  IDDDSELFGAACYGAKVTLTALGEMFQAARSIMSWLGECAKVIASENHPVRWTTPLGLPV 898

Query: 2813 VQPYRKFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKA 2992
            VQPYRK GRH +KTSLQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+A
Sbjct: 899  VQPYRKIGRHLVKTSLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRA 958

Query: 2993 GFNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXER 3172
            G  FAGVHDSYWTHACDVDEMNRILR+KFVELYE PILENLLESF++           ER
Sbjct: 959  GLRFAGVHDSYWTHACDVDEMNRILRDKFVELYEKPILENLLESFEQSFPMLSFPPLPER 1018

Query: 3173 GDFDLKDVLES 3205
            GDFDLKDVLES
Sbjct: 1019 GDFDLKDVLES 1029


>XP_019234815.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana attenuata]
            OIT26485.1 dna-directed rna polymerase 2b,
            chloroplasticmitochondrial [Nicotiana attenuata]
          Length = 1024

 Score = 1406 bits (3639), Expect = 0.0
 Identities = 722/1026 (70%), Positives = 814/1026 (79%), Gaps = 12/1026 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPT-VVLLIHLNSTVMWRNIARKVSPRF-SSLKAKPSLS 337
            M S+K P S  I  + F    KPT + +  + NS +MWRNI +++S R    L       
Sbjct: 1    MSSTKTPISLTIKLNQFTD--KPTGLAINPYHNSPIMWRNIIKQLSSRTPQKLLFSSKNR 58

Query: 338  TYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP------- 496
            TYS  G     I     K R     SC      E+GF  + E LP DEF  RP       
Sbjct: 59   TYSFLGFRQDSIFKDNTKFRSLIPISCSN---IEMGFQNLGENLPGDEFLSRPLIKNQVN 115

Query: 497  NCSFNGLC-PKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQ 670
            N  F   C  KSYASVAE +A                QELL E+  E K+ +  +  +Q+
Sbjct: 116  NNDFCYFCFRKSYASVAEAVAVSSTDAEEDVPVVDEVQELLTELKKEEKKQFAFRRRKQK 175

Query: 671  SVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWF 850
             +  GM   KY+ L+RRQVK+ETEAW QA KEY+ ++ +MCE+KLAPNLPY+KSLFLGWF
Sbjct: 176  MLTSGMGHRKYQALKRRQVKVETEAWEQAAKEYKELLFDMCEKKLAPNLPYVKSLFLGWF 235

Query: 851  EPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVK 1030
            EP  +KI E+QELC QGK+++ YA YF QLPADMM+VITMHKLMGLLMTG  +G ARVV+
Sbjct: 236  EPLRDKIAEEQELCSQGKSKAGYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQ 295

Query: 1031 AACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQK 1210
            AA  IG+AIEQEVRIHNFLE+T+K+K  +D + E+     VT EQEKLRK VTN MKKQK
Sbjct: 296  AALVIGDAIEQEVRIHNFLEKTKKQKAEKDRQKEDGEH--VTQEQEKLRKKVTNLMKKQK 353

Query: 1211 PHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHT 1390
               V  IV+ QDDSKPW  DA+AKVGSRLIELLLQTAYIQPP + LA  PPDIRPAF+H+
Sbjct: 354  LRAVGQIVRRQDDSKPWGQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHS 413

Query: 1391 SQYVIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFL 1567
             + V K TK  SR YG+I+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L
Sbjct: 414  VRTVAKETKSASRRYGIIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYL 473

Query: 1568 TSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHL 1747
             SYVMR  GARQQREA+KRA + QL+PVFEALDTLGSTKWR+NKRVL+V+DRIW  GG L
Sbjct: 474  PSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRL 533

Query: 1748 ADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDE 1927
            ADLVDR+D  LPE+PDTEDEA+             ENRERHSQRCDIELKL+VARKMKDE
Sbjct: 534  ADLVDRDDSLLPEEPDTEDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDE 593

Query: 1928 EGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAG 2107
            EGFFYPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLG+SGL+WLKIHLANLFAG
Sbjct: 594  EGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAVGRPLGESGLRWLKIHLANLFAG 653

Query: 2108 GVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSP 2287
            GV+KLS+EGRI FTENH+D+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSE +RSSSP
Sbjct: 654  GVEKLSHEGRIAFTENHMDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEVVRSSSP 713

Query: 2288 ETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKND 2467
            ET+ISHIPVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVLDI+K D
Sbjct: 714  ETSISHIPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRD 773

Query: 2468 AQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDA 2647
            AQ+DPA FPDA+RAR LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD+
Sbjct: 774  AQRDPAEFPDAVRARALVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDS 833

Query: 2648 ELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYR 2827
            ELFGAACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYR
Sbjct: 834  ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 893

Query: 2828 KFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFA 3007
            K GRH IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFA
Sbjct: 894  KIGRHLIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 953

Query: 3008 GVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDL 3187
            GVHDSYWTHACDVD++NRILREKFVELY+TPILE LLESFQ            ERGDFDL
Sbjct: 954  GVHDSYWTHACDVDKLNRILREKFVELYDTPILEKLLESFQTSYPTLLFPPLPERGDFDL 1013

Query: 3188 KDVLES 3205
            +DVLES
Sbjct: 1014 RDVLES 1019


>XP_010257888.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1405 bits (3637), Expect = 0.0
 Identities = 717/996 (71%), Positives = 804/996 (80%), Gaps = 14/996 (1%)
 Frame = +2

Query: 260  STVMWRNIARKVSPRFSSLKAKPS--LSTYSLSGLS-DSIIPVKLIKLRQYDLSSCPKNA 430
            ST MWR+IAR+ S     L    S  L T+   G S DSI+       R ++L S     
Sbjct: 37   STAMWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQDSILNDTT---RPFELKSSMSFR 93

Query: 431  LAELGFSRMAEILPRDEFFGRP--NCSFNGLCP-------KSYASVAETIAXXXXXXXXX 583
             +E  F R  E+  +++  GRP   C  N + P       K YASVAE +          
Sbjct: 94   FSERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSNHPKGYASVAEAVCSMDAEEDLS 153

Query: 584  XXXXXXXQELLREMGNEAKRGYR-KSWRQQSVDVGMVCWKYRKLRRRQVKIETEAWVQAV 760
                   QELL EMG E K+    +  +Q  +  GM   KY  LRRRQVKIETEAW QA 
Sbjct: 154  AIDEI--QELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYLLLRRRQVKIETEAWEQAA 211

Query: 761  KEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRSSYAPYFDQL 940
            KEYR ++ +MCEQKLAPNLPYMKSLFLGWFEP  + I  +QELCR+GKNR++YAPYFDQL
Sbjct: 212  KEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKNRTAYAPYFDQL 271

Query: 941  PADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLERTEKKKVVQD 1120
            PA+MMSVITMHKLMGLLMTG  +G  RVV+AAC IGEAIE EVRIH FLE+T +KK  +D
Sbjct: 272  PAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKFLEKT-RKKTDKD 330

Query: 1121 TKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVVRNIVKGQDDSKPWTPDARAKVGSRLI 1300
             K++   S+ V  EQ++LRK VT+ MKKQK   VR IVKGQDDSKPW  DA+AKVGSRLI
Sbjct: 331  KKADGGESDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPWGQDAQAKVGSRLI 390

Query: 1301 ELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIK-VTKESRSYGVIKCDPLIHKGLER 1477
            ELL+QTAYIQPP+D LADGPPDIRPAF H+ + V K   K SR YGVI+CDPL+ KGLER
Sbjct: 391  ELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGVIECDPLVRKGLER 450

Query: 1478 TVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAPKKQLEPVFE 1657
            T RHMVIPYMPMLVPP+ WTGYDKG +LFL SYVMR  GARQQREA+KRAP+KQLEPVFE
Sbjct: 451  TARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAVKRAPRKQLEPVFE 510

Query: 1658 ALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEAVLXXXXXXX 1837
            ALDTLG+TKWRVNKRVL+V+DRIW SGG LADLVDRED+P+PE+PDTEDEA +       
Sbjct: 511  ALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDTEDEAEIKKWKWKV 570

Query: 1838 XXXXXENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPHLNHLGSDVC 2017
                 EN ERHSQRCDIELKL+VAR+MKDE+GFFYPHNLDFRGRAYP+HP+LNHLGSD+C
Sbjct: 571  KAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLC 630

Query: 2018 RGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEIFDSADKPLE 2197
            RGILEFAEGRPLGKSGLQWLKIHLANL+AGGVDKLSYEGRI FTENHLD+IFDSAD+PLE
Sbjct: 631  RGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLE 690

Query: 2198 GKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLG 2377
            G+RWWL AEDPFQCLA CINLSEALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDKLG
Sbjct: 691  GRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLG 750

Query: 2378 ADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQVDRKLVKQTV 2557
            A AVNL+A  +PADVYSGIAARVLDI++ DA+KDP T P+A+ ARIL+NQVDRKLVKQTV
Sbjct: 751  AAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARILINQVDRKLVKQTV 810

Query: 2558 MTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAKVTLTALGEMFEAARSIMNW 2737
            MTSVYGVTYIGARDQIKRRLKER  I+DD+ELFGA+CY AK TLTALGEMFEAARSIM+W
Sbjct: 811  MTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTALGEMFEAARSIMSW 870

Query: 2738 LGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKTSLQTLTLQRATEKVMVKRQRT 2917
            LG+CAKIIASENQPVRWTTPLGLPVVQPYRK GRH IKTSLQ LTLQR T+KVMVKRQRT
Sbjct: 871  LGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRT 930

Query: 2918 AFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTHACDVDEMNRILREKFVELYET 3097
            AFPPNFVHSLDGSHMMMTAVAC+KAG NFAGVHDSYWTHACD+DEMN+ILREKFVELYE 
Sbjct: 931  AFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMNKILREKFVELYEK 990

Query: 3098 PILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
            PILENLLESFQ+           ERGDFDL++VL+S
Sbjct: 991  PILENLLESFQQSFPTLNFPPLPERGDFDLREVLDS 1026


>XP_007214918.1 hypothetical protein PRUPE_ppa000719mg [Prunus persica] ONI18904.1
            hypothetical protein PRUPE_3G247300 [Prunus persica]
          Length = 1024

 Score = 1398 bits (3619), Expect = 0.0
 Identities = 708/1005 (70%), Positives = 802/1005 (79%), Gaps = 17/1005 (1%)
 Frame = +2

Query: 242  LLIHLN----STVMWRNIARKVSPRFSS--LKAKPSLSTYSLSGL-SDSIIPVKLIKLRQ 400
            L+ H N    ST +WRN A++   R     + ++     YSL G+  +S+ P      + 
Sbjct: 23   LIFHKNPSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNF---KP 79

Query: 401  YDLSSCPKNALAELGFSRMAEILPRDEFFGRPN-------CSFNGLCPKSYASVAETIAX 559
            ++LSSC     +E+GF     I   ++   +P+         FNG CPK YASVAE ++ 
Sbjct: 80   FELSSCSSLRFSEVGFRGKGAISSPEDCMCKPSFWSVRNPIWFNGFCPKGYASVAEAVSS 139

Query: 560  XXXXXXXXXXXXXXXQELLREMGNEAKRG--YRKSWRQQSVDVGMVCWKYRKLRRRQVKI 733
                           QELL++M  E KR   Y++  RQ     GM   KY  L+RRQ+KI
Sbjct: 140  TDVEEEVSVVDEV--QELLQQMSIEEKREAQYKQRTRQNRAR-GMGQGKYHMLKRRQIKI 196

Query: 734  ETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNRS 913
            ETEAW +A KEYR ++ +MCEQKLAPNLPYMKSLFLGWFEP  N I+++Q+LCR+GKN++
Sbjct: 197  ETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKNKT 256

Query: 914  SYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLER 1093
            +YAPY DQLPADMMSVITMHKLMGLLMTG  +G  RVV AAC IGEAIEQEVRIH FLE 
Sbjct: 257  AYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKFLEM 316

Query: 1094 TEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVVRNIVKGQDDSKPWTPDA 1273
            T KKKV +D ++ E  S+    E+EKL K VTN MKKQK   VR IV   D SK W+ +A
Sbjct: 317  TRKKKVDKDQENGE--SDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSWSLEA 374

Query: 1274 RAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKVTKE-SRSYGVIKCD 1450
            RAKVGSRLIELL QTA+IQPP D LADGPPDIRPAF+HT + V K  K  SR YGVI+CD
Sbjct: 375  RAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGVIECD 434

Query: 1451 PLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRAP 1630
            PL+ KGLE+T RHMVIPYMPMLVPP+ WTGYDKGG+ FL SYVMRI GARQQREA+KR P
Sbjct: 435  PLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAIKRTP 494

Query: 1631 KKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDEA 1810
            ++QLEPVF+ALD LG+T+WRVNKRVL+V+DRIW SGGHLADLVDR D+PLPE+PDTEDE 
Sbjct: 495  REQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDTEDET 554

Query: 1811 VLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHPH 1990
            +L            EN ERHSQRCD ELKL+VARKMKDEEGF+YPHNLDFRGRAYP+HP+
Sbjct: 555  LLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPY 614

Query: 1991 LNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDEI 2170
            LNHLGSDVCRGILEF EGRPLGKSGL WLKIHLANL+AGGVDKLS EGRI FTENHLD+I
Sbjct: 615  LNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENHLDDI 674

Query: 2171 FDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQHY 2350
            FDS DKPLEG+RWWLKAEDPFQCLAVCINL+EALRSSSPET ISHIPVHQDGSCNGLQHY
Sbjct: 675  FDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNGLQHY 734

Query: 2351 AALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQV 2530
            AALGRDKLGA +VNL+   +PADVYSGIA RVL+I++ DAQKDP  FP+ALRA++L+NQV
Sbjct: 735  AALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLLINQV 794

Query: 2531 DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAKVTLTALGEMF 2710
            DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG+ISDDAE+FG ACY AK+TLTALGEMF
Sbjct: 795  DRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTALGEMF 854

Query: 2711 EAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKTSLQTLTLQRATE 2890
            EAAR IM+WLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRH IKTSLQ LTLQR TE
Sbjct: 855  EAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQRETE 914

Query: 2891 KVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTHACDVDEMNRILR 3070
            KVMVKRQRTAFPPNFVHSLD SHMMMTA+ACKKAG +FAGVHDSYWTHACDVDEMN+ILR
Sbjct: 915  KVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMNKILR 974

Query: 3071 EKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
            EKFV+LYETPILENLLESFQ+           ERGDFDL+DVLES
Sbjct: 975  EKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLES 1019


>XP_017975629.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X2 [Theobroma cacao]
          Length = 1032

 Score = 1396 bits (3614), Expect = 0.0
 Identities = 712/1016 (70%), Positives = 808/1016 (79%), Gaps = 15/1016 (1%)
 Frame = +2

Query: 203  FDPFVPVTKPTVVLLIHLN---STVMWRNIARK-VSPRFSSLKAKPSLSTYSLSGLSDSI 370
            FD FVP+      +L       S VMWRNIA+  +S R  S +      TYS  G S   
Sbjct: 17   FDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHSFQC--FARTYSFLGTSQDS 74

Query: 371  IPVKLIKLRQYDLSS-CPKNALAELGFSRMAEILPRDEFFGRPNCSF-------NGLCPK 526
            I  +  K R     S C  +   ++G  R+ E+L   E+ G+ +  F       +GLCP+
Sbjct: 75   IFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGFPRNEIGCSGLCPR 134

Query: 527  SYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKR--GYRKSWRQQSVDVGMVCWK 700
             Y SVAE ++                +ELL EM  E +R  G R+  R Q ++ GM   K
Sbjct: 135  GYVSVAEAVSSTDVEEDVSVVEEI--KELLDEMKKEQRRETGNRRR-RCQIIERGMGESK 191

Query: 701  YRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINED 880
            YR LRRRQVKIETEAW QA KEYR ++ +MCE KLAPNLPY+KSLFLGWFEP  + I ++
Sbjct: 192  YRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKE 251

Query: 881  QELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIE 1060
            QEL R GK R+ YA Y DQLPADM +VITMHKLMGLLMTG  +GCARVV+AAC IG+AIE
Sbjct: 252  QELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIE 311

Query: 1061 QEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVVRNIVKG 1240
            QEVRIH FLE+T+KK+V +  + E D  N    EQEKLRK VT+ +KKQK   VR IVKG
Sbjct: 312  QEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKG 371

Query: 1241 QDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKVTKE 1420
            QDD+KPW  DA+AKVGS LIELL+QTAYIQPP D LAD PPD+RPAF+H+ + V+K  K+
Sbjct: 372  QDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKK 431

Query: 1421 S-RSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGA 1597
            + R YGVI+C+PL+ KGLERT RHMVIPYMPMLVPP+KWTGYD+G +LF+ SY+MR  G 
Sbjct: 432  TGRRYGVIECNPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFIPSYIMRTHGV 491

Query: 1598 RQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIP 1777
            +QQREA+KR P+KQLEPVFEALDTLG TKWRVNKRVL V+DRIWTSGG LADLVDR+D+P
Sbjct: 492  KQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVP 551

Query: 1778 LPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLD 1957
            LPE+PD+EDEAVL            ENRERHS RCD+ELKL+VARKMKDEEGF+YPHNLD
Sbjct: 552  LPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKLAVARKMKDEEGFYYPHNLD 611

Query: 1958 FRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGR 2137
            FRGRAYP+HP+LNHLGSD+CRGILEF EGRPLGKSGL+WLKIHLANL+AGGVDKLS+EGR
Sbjct: 612  FRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGR 671

Query: 2138 ITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVH 2317
            + FTENHLD+IFDSAD+PLEGKRWWLKAEDPFQCLAVCINL+EALRSSSPET +SHIPVH
Sbjct: 672  LAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPVH 731

Query: 2318 QDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPD 2497
            QDGSCNGLQHYAALGRDKLGA +VNL+A  +PADVYSGIAARVLDII+ DAQKDPA FPD
Sbjct: 732  QDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFPD 791

Query: 2498 ALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTA 2677
            AL A++LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I+DD E+FGA+CY A
Sbjct: 792  ALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDDKEIFGASCYAA 851

Query: 2678 KVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKTS 2857
            K TLTALGEMF+AAR+IMNWLGECAKIIASENQPVRWTTPLGLPVVQPYR  GRH IKTS
Sbjct: 852  KTTLTALGEMFQAARAIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKTS 911

Query: 2858 LQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTHA 3037
            LQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAG  FAGVHDSYWTHA
Sbjct: 912  LQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTHA 971

Query: 3038 CDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
             DVD+MNRILRE FVELYE PILENLLESFQ+           ERGDFDL+DVLES
Sbjct: 972  SDVDKMNRILRENFVELYEVPILENLLESFQQSFPTLCFPPLPERGDFDLRDVLES 1027


>XP_015880486.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
            XP_015880487.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Ziziphus jujuba]
          Length = 1028

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 711/1006 (70%), Positives = 805/1006 (80%), Gaps = 13/1006 (1%)
 Frame = +2

Query: 227  KPTVVLLIHLN-STVMWRNIARKVSPRFSSLKAKPSLSTYS--LSGLSDSIIPVKLIKLR 397
            KP++V  I    ST+MWRN AR+   R  +L+ +P   ++S   S L  +    KL K R
Sbjct: 25   KPSIVRTIPSTVSTLMWRNFARQAFSR--NLRFRPDSHSFSRACSFLGKTEHSEKL-KFR 81

Query: 398  QYDLSSCPKNALAELGFSRMAEILPRDEFFGRPNCSFN--------GLCPKSYASVAETI 553
             ++LSSC     +E GF R  EI   D+   R    F         G+CPK YASVAE +
Sbjct: 82   PFELSSCSSYGFSETGFCRNGEISSHDDPVSRLGYGFVRNQVAGNIGICPKGYASVAEAV 141

Query: 554  AXXXXXXXXXXXXXXXXQELLREMGNEAKRGYRKSWRQ-QSVDVGMVCWKYRKLRRRQVK 730
            +                QELL++M  E K+      R  Q +  GM   KY+ LRRRQVK
Sbjct: 142  SSTEVEDDISAGEEI--QELLQQMNKEEKKEILNMRRNHQKMVRGMGEKKYQVLRRRQVK 199

Query: 731  IETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINEDQELCRQGKNR 910
            IETEAW QA+KEY+ ++ +MCEQKLAPNLPYMKSLFLGWFEP  N I ++QELCRQGKN+
Sbjct: 200  IETEAWEQALKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIAKEQELCRQGKNK 259

Query: 911  SSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIEQEVRIHNFLE 1090
             +YAPYFDQLPA+MM+VITMHKLMGLLMTG  +G ARVV AAC IG+AIEQEVRI  FLE
Sbjct: 260  PAYAPYFDQLPAEMMAVITMHKLMGLLMTGGEHGTARVVPAACIIGDAIEQEVRIQRFLE 319

Query: 1091 RTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVVRNIVKGQDDSKPWTPD 1270
            +T KKK+ +D + E     ++  +++KL+K VT+ MKKQK   VR IVK QDD K W  D
Sbjct: 320  KTRKKKLGKDKEDEGYEDTMI--KEQKLKKKVTDLMKKQKLRAVRQIVKRQDDLKSWGQD 377

Query: 1271 ARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKVTKES-RSYGVIKC 1447
            ARAKVGSRLIELL +TA+IQPP D  ADGPPD+RPAF+HT + V+K  K + R YGVI+C
Sbjct: 378  ARAKVGSRLIELLTETAHIQPPADQSADGPPDVRPAFLHTFRTVVKNAKNTGRRYGVIEC 437

Query: 1448 DPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGARQQREALKRA 1627
            DPL+ KGL+RT RHMVIPYMPMLVPP+ WTGYDKGGHL+L SYVMR  GARQQREA+KRA
Sbjct: 438  DPLVLKGLDRTARHMVIPYMPMLVPPVNWTGYDKGGHLYLPSYVMRTHGARQQREAVKRA 497

Query: 1628 PKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIPLPEQPDTEDE 1807
            P++QLEPVFEALD LG+TKWR+NKR+L+++DRIW S G LADLVDR+D+PLPE PDTEDE
Sbjct: 498  PREQLEPVFEALDALGNTKWRINKRILSIVDRIWVSSGRLADLVDRDDVPLPEMPDTEDE 557

Query: 1808 AVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEEGFFYPHNLDFRGRAYPIHP 1987
             +L            ENRERHSQRCD ELKL+VARKMKDEEGF+YPHNLDFRGRAYP+HP
Sbjct: 558  TLLKKWKWKVKNVKKENRERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHP 617

Query: 1988 HLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEGRITFTENHLDE 2167
            +LNHLGSD+CRGILEFAEGRPLGKSGL+WLKIHLANL+AGGVDKLS EGRI FTENHLDE
Sbjct: 618  YLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSLEGRIAFTENHLDE 677

Query: 2168 IFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPVHQDGSCNGLQH 2347
            IFDSAD PLEGKRWWL AEDPFQCLAVCINL+EALRSSSPET ISHIPVHQDGSCNGLQH
Sbjct: 678  IFDSADSPLEGKRWWLNAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGLQH 737

Query: 2348 YAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFPDALRARILVNQ 2527
            YAALGRDK GA AVNL+A  +PADVYSGIAA VL I+K DA++DPA FPDALRA++L+NQ
Sbjct: 738  YAALGRDKSGAAAVNLVAGEKPADVYSGIAASVLKIMKRDAERDPAIFPDALRAKVLINQ 797

Query: 2528 VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYTAKVTLTALGEM 2707
            VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I+DD+ELFG ACY AK TLTALG+M
Sbjct: 798  VDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGGITDDSELFGCACYAAKTTLTALGQM 857

Query: 2708 FEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKTSLQTLTLQRAT 2887
            FEAAR+IMNWLG+CAKIIASENQPVRWTTPLGLPVVQPYRK GRH IKTSLQ LTLQR T
Sbjct: 858  FEAARNIMNWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQRET 917

Query: 2888 EKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTHACDVDEMNRIL 3067
            EKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAG NFAGVHDSYWTHACDVD MN IL
Sbjct: 918  EKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDLMNTIL 977

Query: 3068 REKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
            REKFVELYETPILENLLESFQ+           ERG+FDLK+VLES
Sbjct: 978  REKFVELYETPILENLLESFQQSFPTLTFPSLPERGNFDLKEVLES 1023


>XP_015063458.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Solanum
            pennellii]
          Length = 1019

 Score = 1396 bits (3613), Expect = 0.0
 Identities = 712/1025 (69%), Positives = 808/1025 (78%), Gaps = 11/1025 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVVLLIHLNSTVMWRNIARKVSPRFSS---LKAKPSL 334
            M  +K P S  I F+  +  T P      + NS +MWRNI ++ S R      L +K   
Sbjct: 1    MSCTKTPISLTIKFNTDLE-TNP------YHNSPIMWRNIVKQFSTRTPQKILLTSKNHA 53

Query: 335  STYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP------ 496
             +Y   GL DS+   K I LR +   SC  +   E+GF  + E LP DEF  RP      
Sbjct: 54   YSYLGFGL-DSVFKDKRI-LRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMK 111

Query: 497  -NCSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQ 670
               S N +C K+YASVAE +A                QELL E+  E K+ +  +  +Q+
Sbjct: 112  SQVSNNDICRKNYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRKQR 171

Query: 671  SVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWF 850
             +  G+   KY  L RRQV+IET+AW QA KEYR ++ +MCEQKLAPNLPY+KSLFLGWF
Sbjct: 172  MLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWF 231

Query: 851  EPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVK 1030
            EP  NKI ++QELC QGK++++Y+ YF  LPADMM+VITMHKLMGLLMTG  +G  RVV+
Sbjct: 232  EPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQ 291

Query: 1031 AACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQK 1210
            AA AIG+AIEQEVRIH FLE+TEK K  +D   ++      T EQ+KL K VT+ MKKQK
Sbjct: 292  AALAIGDAIEQEVRIHKFLEKTEKHKAEKDRNIKDGEH--ATLEQKKLHKKVTSLMKKQK 349

Query: 1211 PHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHT 1390
               V  IV+ QDDSKPW  DA+AKVGSRLIE LLQTAYIQ P D LA  PPDIRPAFIH+
Sbjct: 350  LRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHS 409

Query: 1391 SQYVIKVTKESRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLT 1570
            ++ + K T  SR YGVI+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L 
Sbjct: 410  TRTLAKETNASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLP 469

Query: 1571 SYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLA 1750
            SYVMR  GARQQREA+KRA + QL+PVFEALDTLGSTKWR+NKRVL+V+DRIW  GG LA
Sbjct: 470  SYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLA 529

Query: 1751 DLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDEE 1930
            DLVDR+D+PLPE+PDTEDEAV             ENRERHSQRCDIELKL+VA +MKDEE
Sbjct: 530  DLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEE 589

Query: 1931 GFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGG 2110
            GFFYPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLG+SGL+WLKIHLANLFAGG
Sbjct: 590  GFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAGG 649

Query: 2111 VDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPE 2290
            VDKLS +GRI FTE+HLD+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSPE
Sbjct: 650  VDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPE 709

Query: 2291 TTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDA 2470
            T ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVLDI+  DA
Sbjct: 710  TVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRDA 769

Query: 2471 QKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAE 2650
            Q+DPA FPDA+RAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD E
Sbjct: 770  QRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDTE 829

Query: 2651 LFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRK 2830
            LFGAACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYRK
Sbjct: 830  LFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRK 889

Query: 2831 FGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAG 3010
             GRH IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFAG
Sbjct: 890  IGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAG 949

Query: 3011 VHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLK 3190
            VHDSYWTHACDVD++NRILREKFVELYETPILE LLE FQ            ERGDFDL+
Sbjct: 950  VHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDLR 1009

Query: 3191 DVLES 3205
            DV+ES
Sbjct: 1010 DVIES 1014


>XP_015063457.1 PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Solanum
            pennellii]
          Length = 1020

 Score = 1394 bits (3607), Expect = 0.0
 Identities = 713/1026 (69%), Positives = 809/1026 (78%), Gaps = 12/1026 (1%)
 Frame = +2

Query: 164  MFSSKIPNSFGINFDPFVPVTKPTVVLLIHLNSTVMWRNIARKVSPRFSS---LKAKPSL 334
            M  +K P S  I F+  +  T P      + NS +MWRNI ++ S R      L +K   
Sbjct: 1    MSCTKTPISLTIKFNTDLE-TNP------YHNSPIMWRNIVKQFSTRTPQKILLTSKNHA 53

Query: 335  STYSLSGLSDSIIPVKLIKLRQYDLSSCPKNALAELGFSRMAEILPRDEFFGRP------ 496
             +Y   GL DS+   K I LR +   SC  +   E+GF  + E LP DEF  RP      
Sbjct: 54   YSYLGFGL-DSVFKDKRI-LRSFIPVSCSNSGFLEMGFQNLGEFLPGDEFLRRPLLCAMK 111

Query: 497  -NCSFNGLCPKSYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKRGYR-KSWRQQ 670
               S N +C K+YASVAE +A                QELL E+  E K+ +  +  +Q+
Sbjct: 112  SQVSNNDICRKNYASVAEAVAVSSTDAEEDVSVVGEVQELLTELKKEEKKQFTFRRRKQR 171

Query: 671  SVDVGMVCWKYRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWF 850
             +  G+   KY  L RRQV+IET+AW QA KEYR ++ +MCEQKLAPNLPY+KSLFLGWF
Sbjct: 172  MLTSGIDRRKYPALMRRQVQIETQAWEQAAKEYRELLFDMCEQKLAPNLPYVKSLFLGWF 231

Query: 851  EPFTNKINEDQELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVK 1030
            EP  NKI ++QELC QGK++++Y+ YF  LPADMM+VITMHKLMGLLMTG  +G  RVV+
Sbjct: 232  EPLRNKIAQEQELCIQGKSKAAYSKYFHLLPADMMAVITMHKLMGLLMTGGEHGNVRVVQ 291

Query: 1031 AACAIGEAIEQEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQK 1210
            AA AIG+AIEQEVRIH FLE+TEK K  +D   ++      T EQ+KL K VT+ MKKQK
Sbjct: 292  AALAIGDAIEQEVRIHKFLEKTEKHKAEKDRNIKDGEH--ATLEQKKLHKKVTSLMKKQK 349

Query: 1211 PHVVRNIVKGQDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHT 1390
               V  IV+ QDDSKPW  DA+AKVGSRLIE LLQTAYIQ P D LA  PPDIRPAFIH+
Sbjct: 350  LRAVNQIVRSQDDSKPWGQDAKAKVGSRLIEFLLQTAYIQSPADQLAVDPPDIRPAFIHS 409

Query: 1391 SQYVIKVTKE-SRSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFL 1567
            ++ + K TK  SR YGVI+CD L+ KGLERT RHMVIPYMPMLVPP+KWTGYDKGGHL+L
Sbjct: 410  TRTLAKETKSASRRYGVIQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYL 469

Query: 1568 TSYVMRIRGARQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHL 1747
             SYVMR  GARQQREA+KRA + QL+PVFEALDTLGSTKWR+NKRVL+V+DRIW  GG L
Sbjct: 470  PSYVMRTHGARQQREAVKRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRL 529

Query: 1748 ADLVDREDIPLPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLSVARKMKDE 1927
            ADLVDR+D+PLPE+PDTEDEAV             ENRERHSQRCDIELKL+VA +MKDE
Sbjct: 530  ADLVDRDDVPLPEEPDTEDEAVCTKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDE 589

Query: 1928 EGFFYPHNLDFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAG 2107
            EGFFYPHN+DFRGRAYP+HPHLNHLGSD+CRG+LEFA GRPLG+SGL+WLKIHLANLFAG
Sbjct: 590  EGFFYPHNVDFRGRAYPMHPHLNHLGSDICRGVLEFAAGRPLGESGLRWLKIHLANLFAG 649

Query: 2108 GVDKLSYEGRITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSP 2287
            GVDKLS +GRI FTE+HLD+IFDSADKPLEG+RWWL AEDPFQCLAVCINLSEA+RSSSP
Sbjct: 650  GVDKLSLDGRIAFTESHLDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSP 709

Query: 2288 ETTISHIPVHQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKND 2467
            ET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNL+A  +PADVYSGIAARVLDI+  D
Sbjct: 710  ETVISHVPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMNRD 769

Query: 2468 AQKDPATFPDALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDA 2647
            AQ+DPA FPDA+RAR+LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAI+DD 
Sbjct: 770  AQRDPAEFPDAVRARVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDT 829

Query: 2648 ELFGAACYTAKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYR 2827
            ELFGAACY AKVTLTALGEMFEAARSIM WLGECAKIIASEN+PVRWTTPLGLPVVQPYR
Sbjct: 830  ELFGAACYAAKVTLTALGEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYR 889

Query: 2828 KFGRHHIKTSLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFA 3007
            K GRH IKTSLQ LTLQR TEKVMVKRQRTAFPPNF+HSLDGSHMMMTAVAC++AG NFA
Sbjct: 890  KIGRHFIKTSLQILTLQRETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFA 949

Query: 3008 GVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDL 3187
            GVHDSYWTHACDVD++NRILREKFVELYETPILE LLE FQ            ERGDFDL
Sbjct: 950  GVHDSYWTHACDVDKLNRILREKFVELYETPILEKLLEGFQVSYPTLSFPPLPERGDFDL 1009

Query: 3188 KDVLES 3205
            +DV+ES
Sbjct: 1010 RDVIES 1015


>XP_017975628.1 PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Theobroma cacao]
          Length = 1033

 Score = 1392 bits (3602), Expect = 0.0
 Identities = 712/1017 (70%), Positives = 808/1017 (79%), Gaps = 16/1017 (1%)
 Frame = +2

Query: 203  FDPFVPVTKPTVVLLIHLN---STVMWRNIARK-VSPRFSSLKAKPSLSTYSLSGLSDSI 370
            FD FVP+      +L       S VMWRNIA+  +S R  S +      TYS  G S   
Sbjct: 17   FDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHSFQC--FARTYSFLGTSQDS 74

Query: 371  IPVKLIKLRQYDLSS-CPKNALAELGFSRMAEILPRDEFFGRPNCSF-------NGLCPK 526
            I  +  K R     S C  +   ++G  R+ E+L   E+ G+ +  F       +GLCP+
Sbjct: 75   IFHEKSKFRGLKFGSFCSNSRFLDMGGRRIGEVLTNVEYIGKQSFGFPRNEIGCSGLCPR 134

Query: 527  SYASVAETIAXXXXXXXXXXXXXXXXQELLREMGNEAKR--GYRKSWRQQSVDVGMVCWK 700
             Y SVAE ++                +ELL EM  E +R  G R+  R Q ++ GM   K
Sbjct: 135  GYVSVAEAVSSTDVEEDVSVVEEI--KELLDEMKKEQRRETGNRRR-RCQIIERGMGESK 191

Query: 701  YRKLRRRQVKIETEAWVQAVKEYRTIVKEMCEQKLAPNLPYMKSLFLGWFEPFTNKINED 880
            YR LRRRQVKIETEAW QA KEYR ++ +MCE KLAPNLPY+KSLFLGWFEP  + I ++
Sbjct: 192  YRFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLRDAIIKE 251

Query: 881  QELCRQGKNRSSYAPYFDQLPADMMSVITMHKLMGLLMTGEGYGCARVVKAACAIGEAIE 1060
            QEL R GK R+ YA Y DQLPADM +VITMHKLMGLLMTG  +GCARVV+AAC IG+AIE
Sbjct: 252  QELYRLGKLRAGYAGYLDQLPADMTAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIE 311

Query: 1061 QEVRIHNFLERTEKKKVVQDTKSEEDASNVVTHEQEKLRKIVTNAMKKQKPHVVRNIVKG 1240
            QEVRIH FLE+T+KK+V +  + E D  N    EQEKLRK VT+ +KKQK   VR IVKG
Sbjct: 312  QEVRIHKFLEKTKKKRVDKKNEDEGDKPNAEIKEQEKLRKKVTDLIKKQKLPAVRQIVKG 371

Query: 1241 QDDSKPWTPDARAKVGSRLIELLLQTAYIQPPIDHLADGPPDIRPAFIHTSQYVIKVTKE 1420
            QDD+KPW  DA+AKVGS LIELL+QTAYIQPP D LAD PPD+RPAF+H+ + V+K  K+
Sbjct: 372  QDDTKPWGQDAKAKVGSHLIELLMQTAYIQPPADQLADCPPDVRPAFVHSLRTVVKENKK 431

Query: 1421 S-RSYGVIKCDPLIHKGLERTVRHMVIPYMPMLVPPIKWTGYDKGGHLFLTSYVMRIRGA 1597
            + R YGVI+C+PL+ KGLERT RHMVIPYMPMLVPP+KWTGYD+G +LF+ SY+MR  G 
Sbjct: 432  TGRRYGVIECNPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFIPSYIMRTHGV 491

Query: 1598 RQQREALKRAPKKQLEPVFEALDTLGSTKWRVNKRVLTVIDRIWTSGGHLADLVDREDIP 1777
            +QQREA+KR P+KQLEPVFEALDTLG TKWRVNKRVL V+DRIWTSGG LADLVDR+D+P
Sbjct: 492  KQQREAVKRTPRKQLEPVFEALDTLGCTKWRVNKRVLNVVDRIWTSGGRLADLVDRKDVP 551

Query: 1778 LPEQPDTEDEAVLXXXXXXXXXXXXENRERHSQRCDIELKLS-VARKMKDEEGFFYPHNL 1954
            LPE+PD+EDEAVL            ENRERHS RCD+ELKL+ VARKMKDEEGF+YPHNL
Sbjct: 552  LPEKPDSEDEAVLRKWKWKVRSVKKENRERHSLRCDVELKLAQVARKMKDEEGFYYPHNL 611

Query: 1955 DFRGRAYPIHPHLNHLGSDVCRGILEFAEGRPLGKSGLQWLKIHLANLFAGGVDKLSYEG 2134
            DFRGRAYP+HP+LNHLGSD+CRGILEF EGRPLGKSGL+WLKIHLANL+AGGVDKLS+EG
Sbjct: 612  DFRGRAYPMHPYLNHLGSDLCRGILEFGEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEG 671

Query: 2135 RITFTENHLDEIFDSADKPLEGKRWWLKAEDPFQCLAVCINLSEALRSSSPETTISHIPV 2314
            R+ FTENHLD+IFDSAD+PLEGKRWWLKAEDPFQCLAVCINL+EALRSSSPET +SHIPV
Sbjct: 672  RLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLAEALRSSSPETFVSHIPV 731

Query: 2315 HQDGSCNGLQHYAALGRDKLGADAVNLIARGEPADVYSGIAARVLDIIKNDAQKDPATFP 2494
            HQDGSCNGLQHYAALGRDKLGA +VNL+A  +PADVYSGIAARVLDII+ DAQKDPA FP
Sbjct: 732  HQDGSCNGLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIIRRDAQKDPAVFP 791

Query: 2495 DALRARILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAISDDAELFGAACYT 2674
            DAL A++LVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG I+DD E+FGA+CY 
Sbjct: 792  DALHAKVLVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDDKEIFGASCYA 851

Query: 2675 AKVTLTALGEMFEAARSIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHHIKT 2854
            AK TLTALGEMF+AAR+IMNWLGECAKIIASENQPVRWTTPLGLPVVQPYR  GRH IKT
Sbjct: 852  AKTTLTALGEMFQAARAIMNWLGECAKIIASENQPVRWTTPLGLPVVQPYRVLGRHLIKT 911

Query: 2855 SLQTLTLQRATEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGFNFAGVHDSYWTH 3034
            SLQ LTLQR TEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAG  FAGVHDSYWTH
Sbjct: 912  SLQVLTLQRETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLTFAGVHDSYWTH 971

Query: 3035 ACDVDEMNRILREKFVELYETPILENLLESFQRXXXXXXXXXXXERGDFDLKDVLES 3205
            A DVD+MNRILRE FVELYE PILENLLESFQ+           ERGDFDL+DVLES
Sbjct: 972  ASDVDKMNRILRENFVELYEVPILENLLESFQQSFPTLCFPPLPERGDFDLRDVLES 1028