BLASTX nr result
ID: Panax24_contig00027455
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00027455
(365 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 98 3e-21
XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 98 3e-21
XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isofo... 98 3e-21
KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp... 98 3e-21
XP_018811710.1 PREDICTED: DNA mismatch repair protein MLH3-like ... 64 2e-09
XP_012065405.1 PREDICTED: DNA mismatch repair protein MLH3 [Jatr... 61 2e-08
KDP43772.1 hypothetical protein JCGZ_22399 [Jatropha curcas] 61 2e-08
KVI08712.1 DNA mismatch repair, conserved site-containing protei... 54 6e-06
>XP_017252890.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Daucus
carota subsp. sativus]
Length = 1045
Score = 97.8 bits (242), Expect = 3e-21
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = -2
Query: 361 KRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGF 182
KRKRC Q Q +L++P + KML + F ++SPC S LKSSR T E +++Q +
Sbjct: 390 KRKRCEHQLYQAALEVPLHR-KMLKESFNYMSPCSGNTFSGLKSSRTTSESEKNQEKI-- 446
Query: 181 ACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHVD 5
+ + QL DG LS RE +DQENG HLE P KV +AED+ EN T E SNEH+D
Sbjct: 447 ----SSTAQLCDGALSLFREAIDQENGCHLEAPVSKVYFAEDHLFENKVTAEISNEHMD 501
>XP_017252889.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X2 [Daucus
carota subsp. sativus]
Length = 1133
Score = 97.8 bits (242), Expect = 3e-21
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = -2
Query: 361 KRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGF 182
KRKRC Q Q +L++P + KML + F ++SPC S LKSSR T E +++Q +
Sbjct: 390 KRKRCEHQLYQAALEVPLHR-KMLKESFNYMSPCSGNTFSGLKSSRTTSESEKNQEKI-- 446
Query: 181 ACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHVD 5
+ + QL DG LS RE +DQENG HLE P KV +AED+ EN T E SNEH+D
Sbjct: 447 ----SSTAQLCDGALSLFREAIDQENGCHLEAPVSKVYFAEDHLFENKVTAEISNEHMD 501
>XP_017252888.1 PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Daucus
carota subsp. sativus]
Length = 1235
Score = 97.8 bits (242), Expect = 3e-21
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = -2
Query: 361 KRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGF 182
KRKRC Q Q +L++P + KML + F ++SPC S LKSSR T E +++Q +
Sbjct: 390 KRKRCEHQLYQAALEVPLHR-KMLKESFNYMSPCSGNTFSGLKSSRTTSESEKNQEKI-- 446
Query: 181 ACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHVD 5
+ + QL DG LS RE +DQENG HLE P KV +AED+ EN T E SNEH+D
Sbjct: 447 ----SSTAQLCDGALSLFREAIDQENGCHLEAPVSKVYFAEDHLFENKVTAEISNEHMD 501
>KZM93449.1 hypothetical protein DCAR_016694 [Daucus carota subsp. sativus]
Length = 1344
Score = 97.8 bits (242), Expect = 3e-21
Identities = 56/119 (47%), Positives = 73/119 (61%)
Frame = -2
Query: 361 KRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGF 182
KRKRC Q Q +L++P + KML + F ++SPC S LKSSR T E +++Q +
Sbjct: 494 KRKRCEHQLYQAALEVPLHR-KMLKESFNYMSPCSGNTFSGLKSSRTTSESEKNQEKI-- 550
Query: 181 ACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHVD 5
+ + QL DG LS RE +DQENG HLE P KV +AED+ EN T E SNEH+D
Sbjct: 551 ----SSTAQLCDGALSLFREAIDQENGCHLEAPVSKVYFAEDHLFENKVTAEISNEHMD 605
>XP_018811710.1 PREDICTED: DNA mismatch repair protein MLH3-like [Juglans regia]
Length = 1041
Score = 63.9 bits (154), Expect = 2e-09
Identities = 38/119 (31%), Positives = 61/119 (51%)
Frame = -2
Query: 364 MKRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETG 185
+++K+CR + + SLD+ S ++ML KEF HL+ R+ + + EF E Q E G
Sbjct: 188 IEKKKCRVKNHKASLDIYSSPSEML-KEFDHLTEIEHDRIPYANLHKNSAEFREQQNEMG 246
Query: 184 FACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHV 8
F C+++Y+ Q DG+ + C + + HL T D +E N RSN+ V
Sbjct: 247 FVCQNDYAFQSWDGLEAKCIPSATCKYENHLLTSDNNF-----LSIEGNCLKNRSNDDV 300
>XP_012065405.1 PREDICTED: DNA mismatch repair protein MLH3 [Jatropha curcas]
Length = 1234
Score = 60.8 bits (146), Expect = 2e-08
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = -2
Query: 352 RCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGFACE 173
+C Q + S S K+ KE H+ S +V EF E + +T F C
Sbjct: 382 KCEIQKHKSSHHHASSHFKIPAKEVGHIYSRGSDKVPFQGFCMNISEFKEQETDTEFLCH 441
Query: 172 SNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTT-ERSNEH 11
S+Y+LQ +G LS T++Q++ HL T D + DYFLE+ FT +RS+++
Sbjct: 442 SDYTLQSWNGYLSKHASTINQKSDNHLWTSDDNFLSSGDYFLEDRFTARQRSSDY 496
>KDP43772.1 hypothetical protein JCGZ_22399 [Jatropha curcas]
Length = 1239
Score = 60.8 bits (146), Expect = 2e-08
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Frame = -2
Query: 352 RCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETGFACE 173
+C Q + S S K+ KE H+ S +V EF E + +T F C
Sbjct: 387 KCEIQKHKSSHHHASSHFKIPAKEVGHIYSRGSDKVPFQGFCMNISEFKEQETDTEFLCH 446
Query: 172 SNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTT-ERSNEH 11
S+Y+LQ +G LS T++Q++ HL T D + DYFLE+ FT +RS+++
Sbjct: 447 SDYTLQSWNGYLSKHASTINQKSDNHLWTSDDNFLSSGDYFLEDRFTARQRSSDY 501
>KVI08712.1 DNA mismatch repair, conserved site-containing protein [Cynara
cardunculus var. scolymus]
Length = 1257
Score = 53.9 bits (128), Expect = 6e-06
Identities = 40/120 (33%), Positives = 64/120 (53%)
Frame = -2
Query: 364 MKRKRCRTQFRQVSLDLPSPQTKMLIKEFKHLSPCRSIRVSCLKSSRKTLEFDEHQVETG 185
+ +KR T Q L SP KM +E KH+ P S +S RK ++ E+++E
Sbjct: 401 LSKKRRMTLCHQAVLS--SPPQKMPREEPKHM-PYHGY--SSNRSQRKAVQSKEYRIEMD 455
Query: 184 FACESNYSLQLHDGVLSPCRETVDQENGRHLETPDGKVSYAEDYFLENNFTTERSNEHVD 5
F C ++ L+ L + +V QE+G HL P+ +S +ED +L+N + E S+E+VD
Sbjct: 456 FDCLTDNLLEFGGRSLPERKTSVLQESGNHLGKPNSYIS-SEDIYLQNKCSRELSSEYVD 514