BLASTX nr result

ID: Panax24_contig00027238 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027238
         (524 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP16688.1 unnamed protein product [Coffea canephora]                  68   4e-10
XP_011097290.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    66   2e-09
KDO63952.1 hypothetical protein CISIN_1g009056mg [Citrus sinensis]     66   2e-09
XP_006447079.1 hypothetical protein CICLE_v10014820mg [Citrus cl...    66   2e-09
XP_013451410.1 chromatin remodeling complex subunit [Medicago tr...    65   3e-09
OAY25416.1 hypothetical protein MANES_17G092700 [Manihot esculen...    65   3e-09
KYP51967.1 SWI/SNF complex component SNF12 isogeny [Cajanus cajan]     65   4e-09
XP_003524614.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    65   5e-09
XP_012072431.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   9e-09
XP_012072430.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   9e-09
GAU27879.1 hypothetical protein TSUD_159730 [Trifolium subterran...    64   9e-09
XP_002521871.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   9e-09
XP_006373227.1 SWIB complex BAF60b domain-containing family prot...    64   1e-08
XP_019234911.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   1e-08
XP_009783278.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   1e-08
XP_016478030.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   1e-08
XP_009601171.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   1e-08
XP_003553847.1 PREDICTED: SWI/SNF complex component SNF12 homolo...    64   1e-08
GAU45206.1 hypothetical protein TSUD_139110 [Trifolium subterran...    64   1e-08
BAU01533.1 hypothetical protein VIGAN_11078700 [Vigna angularis ...    64   1e-08

>CDP16688.1 unnamed protein product [Coffea canephora]
          Length = 399

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 30/36 (83%), Positives = 33/36 (91%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAST 110
           SAEKERR++F+NQPWVEDAVIRYLNR P ADAP ST
Sbjct: 364 SAEKERRSDFYNQPWVEDAVIRYLNRKPPADAPGST 399


>XP_011097290.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Sesamum
           indicum] XP_011097291.1 PREDICTED: SWI/SNF complex
           component SNF12 homolog [Sesamum indicum]
          Length = 536

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAST 110
           +AEKER ++F+NQPWVEDAVIRYLNR P+ADAP+ST
Sbjct: 501 NAEKERHSDFYNQPWVEDAVIRYLNRKPSADAPSST 536


>KDO63952.1 hypothetical protein CISIN_1g009056mg [Citrus sinensis]
          Length = 545

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR++FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 508 SAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGST 545


>XP_006447079.1 hypothetical protein CICLE_v10014820mg [Citrus clementina]
           XP_006470052.1 PREDICTED: SWI/SNF complex component
           SNF12 homolog [Citrus sinensis] XP_006470053.1
           PREDICTED: SWI/SNF complex component SNF12 homolog
           [Citrus sinensis] ESR60319.1 hypothetical protein
           CICLE_v10014820mg [Citrus clementina]
          Length = 545

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 32/38 (84%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR++FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 508 SAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGST 545


>XP_013451410.1 chromatin remodeling complex subunit [Medicago truncatula]
           KEH25450.1 chromatin remodeling complex subunit
           [Medicago truncatula]
          Length = 558

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 32/38 (84%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR +FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 521 SAEKERRADFFNQPWVEDAVIRYLNRKPAAGSDAPGST 558


>OAY25416.1 hypothetical protein MANES_17G092700 [Manihot esculenta] OAY25417.1
           hypothetical protein MANES_17G092700 [Manihot esculenta]
          Length = 563

 Score = 65.5 bits (158), Expect = 3e-09
 Identities = 32/38 (84%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR +FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 526 SAEKERRADFFNQPWVEDAVIRYLNRKPAAGSDAPGST 563


>KYP51967.1 SWI/SNF complex component SNF12 isogeny [Cajanus cajan]
          Length = 431

 Score = 64.7 bits (156), Expect = 4e-09
 Identities = 31/38 (81%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           +AEKERR++FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 394 NAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGST 431


>XP_003524614.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
           KHN15421.1 SWI/SNF complex component SNF12 like [Glycine
           soja] KRH57679.1 hypothetical protein GLYMA_05G077800
           [Glycine max]
          Length = 543

 Score = 64.7 bits (156), Expect = 5e-09
 Identities = 31/38 (81%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           +AEKERR++FFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 506 NAEKERRSDFFNQPWVEDAVIRYLNRKPAAGSDAPGST 543


>XP_012072431.1 PREDICTED: SWI/SNF complex component SNF12 homolog isoform X2
           [Jatropha curcas]
          Length = 523

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR +FFNQPWVEDAVIRYLNR P A  DAP ST
Sbjct: 486 SAEKERRADFFNQPWVEDAVIRYLNRKPTAGSDAPGST 523


>XP_012072430.1 PREDICTED: SWI/SNF complex component SNF12 homolog isoform X1
           [Jatropha curcas] KDP38218.1 hypothetical protein
           JCGZ_04861 [Jatropha curcas]
          Length = 548

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR +FFNQPWVEDAVIRYLNR P A  DAP ST
Sbjct: 511 SAEKERRADFFNQPWVEDAVIRYLNRKPTAGSDAPGST 548


>GAU27879.1 hypothetical protein TSUD_159730 [Trifolium subterraneum]
          Length = 555

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 31/36 (86%), Positives = 32/36 (88%), Gaps = 2/36 (5%)
 Frame = +3

Query: 9   EKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           EKERR+EFFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 520 EKERRSEFFNQPWVEDAVIRYLNRKPAAGSDAPGST 555


>XP_002521871.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Ricinus
           communis] XP_015576499.1 PREDICTED: SWI/SNF complex
           component SNF12 homolog [Ricinus communis] EEF40507.1
           brg-1 associated factor, putative [Ricinus communis]
          Length = 572

 Score = 63.9 bits (154), Expect = 9e-09
 Identities = 31/38 (81%), Positives = 32/38 (84%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           SAEKERR +FFNQPWVEDAVIRYLNR P A  DAP ST
Sbjct: 535 SAEKERRADFFNQPWVEDAVIRYLNRKPTAGSDAPGST 572


>XP_006373227.1 SWIB complex BAF60b domain-containing family protein [Populus
           trichocarpa] ERP51024.1 SWIB complex BAF60b
           domain-containing family protein [Populus trichocarpa]
          Length = 408

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPA--ADAPAST 110
           +AEKERR++FFNQPWVEDAVIRYLNR PA  +DAP ST
Sbjct: 371 NAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPGST 408


>XP_019234911.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Nicotiana
           attenuata] OIT26424.1 swisnf complex component
           snf12-like protein [Nicotiana attenuata]
          Length = 535

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAS 107
           +AEKERR++F++QPWVEDAVIRYLNR PA+DAP S
Sbjct: 500 NAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGS 534


>XP_009783278.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Nicotiana
           sylvestris] XP_016497755.1 PREDICTED: SWI/SNF complex
           component SNF12 homolog [Nicotiana tabacum]
          Length = 535

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAS 107
           +AEKERR++F++QPWVEDAVIRYLNR PA+DAP S
Sbjct: 500 NAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGS 534


>XP_016478030.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Nicotiana
           tabacum]
          Length = 537

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAS 107
           +AEKERR++F++QPWVEDAVIRYLNR PA+DAP S
Sbjct: 502 NAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGS 536


>XP_009601171.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Nicotiana
           tomentosiformis]
          Length = 537

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAADAPAS 107
           +AEKERR++F++QPWVEDAVIRYLNR PA+DAP S
Sbjct: 502 NAEKERRSQFYSQPWVEDAVIRYLNRKPASDAPGS 536


>XP_003553847.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Glycine max]
           XP_006604071.1 PREDICTED: SWI/SNF complex component
           SNF12 homolog [Glycine max] KHN39766.1 SWI/SNF complex
           component SNF12 like [Glycine soja] KRG94253.1
           hypothetical protein GLYMA_19G071500 [Glycine max]
           KRG94254.1 hypothetical protein GLYMA_19G071500 [Glycine
           max]
          Length = 543

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPA--ADAPAST 110
           +AEKERR++FFNQPWVEDAVIRYLNR PA  +DAP ST
Sbjct: 506 NAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPGST 543


>GAU45206.1 hypothetical protein TSUD_139110 [Trifolium subterraneum]
          Length = 544

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 31/38 (81%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPAA--DAPAST 110
           S EKER++EFFNQPWVEDAVIRYLNR PAA  DAP ST
Sbjct: 507 SIEKERQSEFFNQPWVEDAVIRYLNRKPAAGSDAPGST 544


>BAU01533.1 hypothetical protein VIGAN_11078700 [Vigna angularis var.
           angularis]
          Length = 545

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +3

Query: 3   SAEKERRTEFFNQPWVEDAVIRYLNRNPA--ADAPAST 110
           +AEKERR++FFNQPWVEDAVIRYLNR PA  +DAP ST
Sbjct: 508 NAEKERRSDFFNQPWVEDAVIRYLNRKPAVGSDAPGST 545


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