BLASTX nr result

ID: Panax24_contig00027031 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027031
         (359 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_007149604.1 hypothetical protein PHAVU_005G083600g [Phaseolus...    54   1e-06
XP_007161912.1 hypothetical protein PHAVU_001G108100g [Phaseolus...    53   2e-06
ABA39136.1 60S ribosomal protein L12, partial [Gossypium hirsutum]     50   3e-06
KHN48295.1 60S ribosomal protein L12-1 [Glycine soja]                  51   5e-06
XP_007144076.1 hypothetical protein PHAVU_007G126600g [Phaseolus...    52   7e-06
KVH90446.1 Ribosomal protein L11 [Cynara cardunculus var. scolymus]    53   8e-06
O50003.1 RecName: Full=60S ribosomal protein L12 AAB97143.1 ribo...    52   9e-06
ABR25744.1 60S ribosomal protein l12, partial [Oryza sativa Indi...    50   9e-06

>XP_007149604.1 hypothetical protein PHAVU_005G083600g [Phaseolus vulgaris]
           ESW21598.1 hypothetical protein PHAVU_005G083600g
           [Phaseolus vulgaris]
          Length = 150

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L+  +KEILR+CVSVGC+VDG +P DLQQEISD
Sbjct: 106 MAKDLSRSIKEILRTCVSVGCTVDGKDPKDLQQEISD 142


>XP_007161912.1 hypothetical protein PHAVU_001G108100g [Phaseolus vulgaris]
           ESW33906.1 hypothetical protein PHAVU_001G108100g
           [Phaseolus vulgaris]
          Length = 150

 Score = 53.1 bits (126), Expect = 2e-06
 Identities = 25/37 (67%), Positives = 30/37 (81%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L+  +KEILR+CVSVGC+VDG +P DLQQEISD
Sbjct: 106 MEKDLSRSIKEILRTCVSVGCTVDGKDPKDLQQEISD 142


>ABA39136.1 60S ribosomal protein L12, partial [Gossypium hirsutum]
          Length = 45

 Score = 50.4 bits (119), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 28/37 (75%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L   +KEIL +CVSVGC+VDG +P DLQQEISD
Sbjct: 1   MAKDLRETVKEILGTCVSVGCTVDGKDPKDLQQEISD 37


>KHN48295.1 60S ribosomal protein L12-1 [Glycine soja]
          Length = 100

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L+  +KEIL +CVSVGC+VDG +P DLQQEISD
Sbjct: 56  MAKDLSGTIKEILGTCVSVGCTVDGKDPKDLQQEISD 92


>XP_007144076.1 hypothetical protein PHAVU_007G126600g [Phaseolus vulgaris]
           ESW16070.1 hypothetical protein PHAVU_007G126600g
           [Phaseolus vulgaris]
          Length = 150

 Score = 52.0 bits (123), Expect = 7e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L+  +KEILR+CVSVGC+V+G +P DLQQEISD
Sbjct: 106 MAKDLSRSIKEILRTCVSVGCTVNGKDPKDLQQEISD 142


>KVH90446.1 Ribosomal protein L11 [Cynara cardunculus var. scolymus]
          Length = 213

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 25/38 (65%), Positives = 30/38 (78%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISDV 157
           M   LT  +KEIL +CVSVGC+VDG +P DLQQEI+DV
Sbjct: 122 MAKELTGTVKEILGTCVSVGCTVDGKDPKDLQQEIADV 159


>O50003.1 RecName: Full=60S ribosomal protein L12 AAB97143.1 ribosomal
           protein L12 [Prunus armeniaca]
          Length = 166

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   L   +KEILR+CVSVGC+VDG +P DLQQEI+D
Sbjct: 122 MAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIAD 158


>ABR25744.1 60S ribosomal protein l12, partial [Oryza sativa Indica Group]
          Length = 64

 Score = 49.7 bits (117), Expect = 9e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -3

Query: 270 MGSTLTVPLKEILRSCVSVGCSVDGHNPYDLQQEISD 160
           M   +   +KEIL +CVSVGC+VDG +P DLQQEISD
Sbjct: 20  MAKEMAGTVKEILGTCVSVGCTVDGKDPKDLQQEISD 56


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