BLASTX nr result

ID: Panax24_contig00027028 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00027028
         (664 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017217580.1 PREDICTED: transcription factor TCP17 [Daucus car...    95   9e-20
KVI02591.1 Transcription factor, TCP [Cynara cardunculus var. sc...    76   2e-12
XP_010260174.1 PREDICTED: transcription factor TCP2-like [Nelumb...    61   2e-07
XP_006338357.1 PREDICTED: transcription factor TCP17 [Solanum tu...    57   5e-06
XP_015064545.1 PREDICTED: transcription factor TCP17 isoform X1 ...    56   9e-06

>XP_017217580.1 PREDICTED: transcription factor TCP17 [Daucus carota subsp.
           sativus] KZM88362.1 hypothetical protein DCAR_025437
           [Daucus carota subsp. sativus]
          Length = 314

 Score = 95.1 bits (235), Expect = 9e-20
 Identities = 56/121 (46%), Positives = 66/121 (54%)
 Frame = +2

Query: 5   LLNNVMPVHNSSFLPWDTSNLSLYQKEDHPHQNFNFVPILPSTSLSMPSGSHQFVVYPPA 184
           L+NN++P+ N S+L WD SNLS    ED        +PI  S+SLSMPSGS QFVVYP A
Sbjct: 215 LINNMIPISNPSYLRWDPSNLSRSHTED--------IPISQSSSLSMPSGS-QFVVYPHA 265

Query: 185 REFDPKHMINFQMXXXXXXXXXXXXXXXXXXXXXXYTINQAMRPFHLSMNPYGGTAPTKD 364
           REFDPK M NFQM                         N    PFHLS + Y G+AP KD
Sbjct: 266 REFDPKQMFNFQMLGSNIASQNSPFS------------NPPFTPFHLSRDSYSGSAPNKD 313

Query: 365 D 367
           +
Sbjct: 314 E 314


>KVI02591.1 Transcription factor, TCP [Cynara cardunculus var. scolymus]
          Length = 407

 Score = 75.9 bits (185), Expect = 2e-12
 Identities = 52/137 (37%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
 Frame = +2

Query: 2   GLLNNVMPVHNSSFLPWDTSNLSL-----YQKEDHPHQNFNFVPILPSTSLSMPSGSHQF 166
           GLLNNV+P  N+SFL WD SNLSL     Y    + HQ+ + V        S+   S Q 
Sbjct: 257 GLLNNVVP--NNSFLKWDPSNLSLSQFGSYGSVGNHHQDHDTVHNFNMNVSSINHPSSQL 314

Query: 167 VVYPP--------------------AREFDPKHMINFQMXXXXXXXXXXXXXXXXXXXXX 286
           ++YPP                    + EFDPK  +NFQM                     
Sbjct: 315 LLYPPPPAPPPRPQTQSYFPSHDHNSGEFDPKQQLNFQMLSSSSTSSHNPLSSSSNFTPS 374

Query: 287 XYTINQAMRPFHLSMNP 337
            YTINQ MRPFHLSMNP
Sbjct: 375 LYTINQEMRPFHLSMNP 391


>XP_010260174.1 PREDICTED: transcription factor TCP2-like [Nelumbo nucifera]
           XP_010260177.1 PREDICTED: transcription factor TCP2-like
           [Nelumbo nucifera]
          Length = 400

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
 Frame = +2

Query: 2   GLLNNVMPVHNSSFLPWDTSNLSL--------YQKEDHPHQNFNFVPILPSTSLSMPSGS 157
           GLLNN MP +NS +    ++ LSL        Y  +     N+N +  L S+SLS+P+GS
Sbjct: 253 GLLNNSMPPYNSYYHWEPSAGLSLSHHTGSHGYSSQAEDPHNYNVIS-LSSSSLSLPTGS 311

Query: 158 HQFVVYP-------------PAREFDPKHMINFQMXXXXXXXXXXXXXXXXXXXXXXYTI 298
           HQ +VYP              + E DP+ M +FQM                      Y+I
Sbjct: 312 HQLLVYPSGTTPSFLPPFVTTSLECDPRQMNHFQM----LSSSSQNQPTNSLITPSLYSI 367

Query: 299 NQAMRPFHLSMNP 337
           N + RPF LS+NP
Sbjct: 368 NASTRPFQLSINP 380


>XP_006338357.1 PREDICTED: transcription factor TCP17 [Solanum tuberosum]
          Length = 283

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 47/128 (36%), Positives = 56/128 (43%), Gaps = 24/128 (18%)
 Frame = +2

Query: 11  NNVMPVHNSSFLPWDTSNLSLYQKED---HPHQ----NFNFVPILPSTSLSMPSGS-HQF 166
           NN    +NS+FL WD SNLSL   E+   H HQ    NFN +        SMP GS HQ 
Sbjct: 150 NNNALGYNSNFLKWDPSNLSLAHSENSLSHQHQDIHHNFNLMS-------SMPLGSHHQV 202

Query: 167 VVYPP----------------AREFDPKHMINFQMXXXXXXXXXXXXXXXXXXXXXXYTI 298
           VVYPP                + EFDPK  INFQM                       + 
Sbjct: 203 VVYPPGLPQFFHQHNIVGPSSSSEFDPKE-INFQMLSNNSGSENPMSSSTNSFRHSIDST 261

Query: 299 NQAMRPFH 322
           +Q++RPFH
Sbjct: 262 SQSIRPFH 269


>XP_015064545.1 PREDICTED: transcription factor TCP17 isoform X1 [Solanum
           pennellii]
          Length = 283

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 45/129 (34%), Positives = 53/129 (41%), Gaps = 25/129 (19%)
 Frame = +2

Query: 11  NNVMPVHNSSFLPWDTSNLSLYQKE-------DHPHQNFNFVPILPSTSLSMPSGSHQFV 169
           NN    +N +F  WD SNLSL   E       DH HQNFN +  +P TS       HQ V
Sbjct: 149 NNNALGYNPNFFKWDPSNLSLAHSENSLSHQHDH-HQNFNLMSSMPLTS------HHQPV 201

Query: 170 VYPP------------------AREFDPKHMINFQMXXXXXXXXXXXXXXXXXXXXXXYT 295
           VYPP                  + EFDPK  INFQM                       +
Sbjct: 202 VYPPGLPQFFHQHNNINVGASSSSEFDPKE-INFQMLSNNSGSENPMSTSTNSFRHSIDS 260

Query: 296 INQAMRPFH 322
            NQ++RPFH
Sbjct: 261 TNQSIRPFH 269


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