BLASTX nr result

ID: Panax24_contig00026682 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00026682
         (453 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_018491786.1 PREDICTED: transportin-1 [Raphanus sativus]             56   2e-06
XP_006299086.1 hypothetical protein CARUB_v10015224mg [Capsella ...    56   3e-06
XP_013650309.1 PREDICTED: transportin-1-like [Brassica napus]          55   7e-06
AAC64225.1 putative transportin [Arabidopsis thaliana]                 55   8e-06
CDY31391.1 BnaA07g03260D [Brassica napus]                              55   8e-06
CDY47482.1 BnaA09g08910D [Brassica napus]                              55   8e-06
XP_018440560.1 PREDICTED: transportin-1-like isoform X3 [Raphanu...    55   8e-06
XP_013724923.1 PREDICTED: transportin-1 [Brassica napus]               55   8e-06
XP_013598688.1 PREDICTED: transportin-1-like [Brassica oleracea ...    55   8e-06
XP_009121176.1 PREDICTED: transportin-1-like [Brassica rapa]           55   8e-06
XP_013655853.1 PREDICTED: transportin-1-like [Brassica napus]          55   8e-06
XP_013612302.1 PREDICTED: transportin-1 [Brassica oleracea var. ...    55   8e-06
XP_009112411.1 PREDICTED: transportin-1 [Brassica rapa]                55   8e-06
XP_006409367.1 hypothetical protein EUTSA_v10022538mg [Eutrema s...    55   8e-06
OAP11396.1 TRN1 [Arabidopsis thaliana]                                 55   8e-06
NP_001031359.1 transportin 1 [Arabidopsis thaliana] Q8H0U4.1 Rec...    55   8e-06
XP_018440559.1 PREDICTED: transportin-1-like isoform X2 [Raphanu...    55   8e-06
XP_010467429.1 PREDICTED: transportin-1 [Camelina sativa]              55   8e-06
XP_010489304.1 PREDICTED: transportin-1-like [Camelina sativa]         55   8e-06
CAC80068.1 transportin [Arabidopsis thaliana]                          55   8e-06

>XP_018491786.1 PREDICTED: transportin-1 [Raphanus sativus]
          Length = 891

 Score = 56.2 bits (134), Expect = 2e-06
 Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   +NL  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 241 LVCAAFVNLTEVLPSSIEPHIRNVMEYMLQVNKDPDEEVALEACEFW 287


>XP_006299086.1 hypothetical protein CARUB_v10015224mg [Capsella rubella]
           EOA31984.1 hypothetical protein CARUB_v10015224mg
           [Capsella rubella]
          Length = 891

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/47 (55%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVSLEACEFW 287


>XP_013650309.1 PREDICTED: transportin-1-like [Brassica napus]
          Length = 463

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 187 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 233


>AAC64225.1 putative transportin [Arabidopsis thaliana]
          Length = 827

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VN+DPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFW 287


>CDY31391.1 BnaA07g03260D [Brassica napus]
          Length = 882

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 287


>CDY47482.1 BnaA09g08910D [Brassica napus]
          Length = 883

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 287


>XP_018440560.1 PREDICTED: transportin-1-like isoform X3 [Raphanus sativus]
          Length = 889

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_013724923.1 PREDICTED: transportin-1 [Brassica napus]
          Length = 889

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_013598688.1 PREDICTED: transportin-1-like [Brassica oleracea var. oleracea]
          Length = 889

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_009121176.1 PREDICTED: transportin-1-like [Brassica rapa]
          Length = 889

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_013655853.1 PREDICTED: transportin-1-like [Brassica napus]
          Length = 890

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_013612302.1 PREDICTED: transportin-1 [Brassica oleracea var. oleracea]
           XP_013612303.1 PREDICTED: transportin-1 [Brassica
           oleracea var. oleracea] XP_013641994.1 PREDICTED:
           transportin-1 [Brassica napus] XP_013641995.1 PREDICTED:
           transportin-1 [Brassica napus]
          Length = 890

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_009112411.1 PREDICTED: transportin-1 [Brassica rapa]
          Length = 890

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_006409367.1 hypothetical protein EUTSA_v10022538mg [Eutrema salsugineum]
           XP_006409368.1 hypothetical protein EUTSA_v10022538mg
           [Eutrema salsugineum] ESQ50820.1 hypothetical protein
           EUTSA_v10022538mg [Eutrema salsugineum] ESQ50821.1
           hypothetical protein EUTSA_v10022538mg [Eutrema
           salsugineum]
          Length = 890

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>OAP11396.1 TRN1 [Arabidopsis thaliana]
          Length = 891

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VN+DPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFW 287


>NP_001031359.1 transportin 1 [Arabidopsis thaliana] Q8H0U4.1 RecName:
           Full=Transportin-1; Short=AtTRN1; AltName: Full=Importin
           beta-2; AltName: Full=Karyopherin beta-2 AAN72052.1
           putative transportin [Arabidopsis thaliana] AAP68243.1
           At2g16950 [Arabidopsis thaliana] AEC06562.1 transportin
           1 [Arabidopsis thaliana]
          Length = 891

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VN+DPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFW 287


>XP_018440559.1 PREDICTED: transportin-1-like isoform X2 [Raphanus sativus]
          Length = 892

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VNKDPDEE++L+ACEFW
Sbjct: 240 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFW 286


>XP_010467429.1 PREDICTED: transportin-1 [Camelina sativa]
          Length = 892

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RN++EYM +VNKDPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNLMEYMLQVNKDPDEEVSLEACEFW 287


>XP_010489304.1 PREDICTED: transportin-1-like [Camelina sativa]
          Length = 893

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RN++EYM +VNKDPDEE+SL+ACEFW
Sbjct: 241 LVCAAFVHLTEVLPSSIEPHLRNLMEYMLQVNKDPDEEVSLEACEFW 287


>CAC80068.1 transportin [Arabidopsis thaliana]
          Length = 894

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -3

Query: 292 LTCVCILNL--LLFM*LQPYKRNVIEYM*EVNKDPDEELSLKACEFW 158
           L C   ++L  +L   ++P+ RNV+EYM +VN+DPDEE+SL+ACEFW
Sbjct: 244 LVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNRDPDEEVSLEACEFW 290


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