BLASTX nr result
ID: Panax24_contig00026548
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00026548
(389 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_011036118.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 86 3e-17
XP_011036109.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 86 3e-17
XP_019053084.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 86 3e-17
XP_011036100.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 86 4e-17
XP_010255389.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 86 5e-17
XP_002320128.2 hypothetical protein POPTR_0014s07860g [Populus t... 86 5e-17
XP_015872061.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 82 4e-16
XP_002273844.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 76 1e-13
XP_009629643.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 74 9e-13
XP_002511848.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 74 9e-13
GAU36570.1 hypothetical protein TSUD_362410 [Trifolium subterran... 73 1e-12
XP_016458251.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 73 2e-12
XP_012083409.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 72 2e-12
XP_016496020.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 72 4e-12
XP_009779200.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 72 4e-12
XP_016572672.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 71 6e-12
XP_006345590.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 71 8e-12
XP_019224728.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 71 8e-12
XP_017244077.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 70 1e-11
XP_004240104.1 PREDICTED: UPF0187 protein At3g61320, chloroplast... 70 1e-11
>XP_011036118.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic isoform X3
[Populus euphratica]
Length = 364
Score = 85.9 bits (211), Expect = 3e-17
Identities = 50/111 (45%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKF---SFRVQCXXXXXXXXXX 154
M P+NP++ S FTP+TPLKL PSKP+K SF+
Sbjct: 1 MSQPSNPLKPPLTNISLSSRFTPKTPLKLPLTTCPSKPLKAGTPSFKTLSSNSQNPPKKP 60
Query: 153 XXXXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
T+ S+L AIP WAD+ QER MQKKRSLYNHE W EHRSS R
Sbjct: 61 SKAI------TITSLLRAIPEWADRVQERGMQKKRSLYNHEKWAEHRSSFR 105
>XP_011036109.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic isoform X2
[Populus euphratica]
Length = 375
Score = 85.9 bits (211), Expect = 3e-17
Identities = 50/111 (45%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKF---SFRVQCXXXXXXXXXX 154
M P+NP++ S FTP+TPLKL PSKP+K SF+
Sbjct: 1 MSQPSNPLKPPLTNISLSSRFTPKTPLKLPLTTCPSKPLKAGTPSFKTLSSNSQNPPKKP 60
Query: 153 XXXXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
T+ S+L AIP WAD+ QER MQKKRSLYNHE W EHRSS R
Sbjct: 61 SKAI------TITSLLRAIPEWADRVQERGMQKKRSLYNHEKWAEHRSSFR 105
>XP_019053084.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 338
Score = 85.5 bits (210), Expect = 3e-17
Identities = 45/89 (50%), Positives = 55/89 (61%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXXXXXXXXQKTLVSILLAIPNW 88
H TP+ L+LHSP LP KP K SFRV C + +SIL ++P+W
Sbjct: 19 HLTPKEVLRLHSP-LPQKPSKISFRVLCAQSSDSEQT----------RHFISILRSVPDW 67
Query: 87 ADKNQERRMQKKRSLYNHENWVEHRSSLR 1
AD +ER MQKKRSLY+HE WV+HRSSLR
Sbjct: 68 ADGIKERGMQKKRSLYDHETWVQHRSSLR 96
>XP_011036100.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic isoform X1
[Populus euphratica]
Length = 420
Score = 85.9 bits (211), Expect = 4e-17
Identities = 50/111 (45%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKF---SFRVQCXXXXXXXXXX 154
M P+NP++ S FTP+TPLKL PSKP+K SF+
Sbjct: 1 MSQPSNPLKPPLTNISLSSRFTPKTPLKLPLTTCPSKPLKAGTPSFKTLSSNSQNPPKKP 60
Query: 153 XXXXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
T+ S+L AIP WAD+ QER MQKKRSLYNHE W EHRSS R
Sbjct: 61 SKAI------TITSLLRAIPEWADRVQERGMQKKRSLYNHEKWAEHRSSFR 105
>XP_010255389.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic isoform X1
[Nelumbo nucifera]
Length = 407
Score = 85.5 bits (210), Expect = 5e-17
Identities = 45/89 (50%), Positives = 55/89 (61%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXXXXXXXXQKTLVSILLAIPNW 88
H TP+ L+LHSP LP KP K SFRV C + +SIL ++P+W
Sbjct: 19 HLTPKEVLRLHSP-LPQKPSKISFRVLCAQSSDSEQT----------RHFISILRSVPDW 67
Query: 87 ADKNQERRMQKKRSLYNHENWVEHRSSLR 1
AD +ER MQKKRSLY+HE WV+HRSSLR
Sbjct: 68 ADGIKERGMQKKRSLYDHETWVQHRSSLR 96
>XP_002320128.2 hypothetical protein POPTR_0014s07860g [Populus trichocarpa]
EEE98443.2 hypothetical protein POPTR_0014s07860g
[Populus trichocarpa]
Length = 420
Score = 85.5 bits (210), Expect = 5e-17
Identities = 48/108 (44%), Positives = 59/108 (54%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXXX 145
M P+NP++ S FTP+TPLKL PSKP+K S
Sbjct: 1 MSQPSNPLKPPLTNISLSSRFTPKTPLKLPLTTFPSKPLKASTPA---FKTLSFNSQTPP 57
Query: 144 XXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
T+ S+L AIP+WAD+ +ER M+KKRSLYNHE WVEHRSS R
Sbjct: 58 KKPSKAITITSLLRAIPDWADRVKERGMRKKRSLYNHEKWVEHRSSFR 105
>XP_015872061.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like, partial
[Ziziphus jujuba]
Length = 351
Score = 82.4 bits (202), Expect = 4e-16
Identities = 47/105 (44%), Positives = 59/105 (56%)
Frame = -3
Query: 315 PTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXXXXXX 136
PT PI+ +FTP+ L LH P LPSKP SF++ C
Sbjct: 4 PTKPIKLYS-------NFTPKPFLNLHLPALPSKPRTISFQILCCSDPPTPSSSSSSSSS 56
Query: 135 XXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
+TLVSIL AIP+WAD+ +ER M++ R LY+HE WV HRSSLR
Sbjct: 57 ---QTLVSILRAIPDWADQVKERGMRQNRVLYSHEKWVHHRSSLR 98
>XP_002273844.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis
vinifera]
Length = 419
Score = 75.9 bits (185), Expect = 1e-13
Identities = 49/112 (43%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLK----LHSPHLPSKPMKFSFRVQCXXXXXXXXX 157
MR PT+ IQ + P + LK H LPSKP K SFRV
Sbjct: 1 MRKPTHSIQLPT-------NLAPYSSLKTIPNFHFLPLPSKPTKLSFRV----FSSRSAD 49
Query: 156 XXXXXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
TL+SIL +P+WAD +ER MQ+KRSLYNHE WVEHRSS R
Sbjct: 50 SPPPPSSTQNLTLISILRTVPDWADAIKERGMQQKRSLYNHETWVEHRSSRR 101
>XP_009629643.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana
tomentosiformis]
Length = 417
Score = 73.6 bits (179), Expect = 9e-13
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSK----PMKFS-FRVQCXXXXXXXXXXXXXXXXXXQKTLVSILL 103
HFT +TP KL PSK ++FS F+V+C L+SIL
Sbjct: 21 HFTLKTPSKLQQQSFPSKLNFKKLRFSTFKVRCCPQQTPQNQNPT-------SALISILR 73
Query: 102 AIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
IP+WAD+ QE M+KKRSLY HE+W++HRSSLR
Sbjct: 74 IIPDWADRIQEEGMKKKRSLYTHESWMQHRSSLR 107
>XP_002511848.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic [Ricinus
communis] EEF50517.1 conserved hypothetical protein
[Ricinus communis]
Length = 417
Score = 73.6 bits (179), Expect = 9e-13
Identities = 43/108 (39%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Frame = -3
Query: 312 TNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMK----FSFRVQCXXXXXXXXXXXXX 145
T P + S+FTP+ L LH PSKP + S + C
Sbjct: 6 TTPFKSPLPKTSLSSNFTPKILLTLHLTTFPSKPNRKKSNLSLKTLCSKPPPNPHKTLTL 65
Query: 144 XXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
TL+S+L AIP+W+D+ +ER MQ+KR+LYNH WVEHRSSLR
Sbjct: 66 -------TLISLLRAIPDWSDRIKERGMQQKRTLYNHNKWVEHRSSLR 106
>GAU36570.1 hypothetical protein TSUD_362410 [Trifolium subterraneum]
Length = 408
Score = 73.2 bits (178), Expect = 1e-12
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = -3
Query: 126 KTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
KTL+SIL IP+WAD+NQER MQK R+LYNH NWV+HRSSLR
Sbjct: 59 KTLISILRTIPDWADQNQERGMQKNRTLYNHTNWVQHRSSLR 100
>XP_016458251.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana
tabacum]
Length = 374
Score = 72.8 bits (177), Expect = 2e-12
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSK----PMKFS-FRVQCXXXXXXXXXXXXXXXXXXQKTLVSILL 103
HFT +TP KL PSK ++FS F+V+C L+SIL
Sbjct: 21 HFTLKTPSKLQQQSFPSKLNFKKLRFSTFKVRCCPQQTPQNQNPT-------SALISILR 73
Query: 102 AIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
IP+WAD+ QE M+KKRSLY HE+W++HRSSLR
Sbjct: 74 IIPDWADRIQEGGMKKKRSLYTHESWMQHRSSLR 107
>XP_012083409.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic [Jatropha
curcas] KDP28640.1 hypothetical protein JCGZ_14411
[Jatropha curcas]
Length = 414
Score = 72.4 bits (176), Expect = 2e-12
Identities = 46/110 (41%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMK--FSFRVQCXXXXXXXXXXX 151
M PT P + SHF P+ KL S SK K SF+
Sbjct: 1 MSPPTKPFESPFPKISLSSHFIPKICFKLQSTTFSSKLQKPILSFKTLSSHSSIPPESPK 60
Query: 150 XXXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
TLVS+L AIP+WAD +ER MQ+KR+LYNH+ WVEHRSSLR
Sbjct: 61 TL-------TLVSLLRAIPDWADGVKERGMQQKRTLYNHKKWVEHRSSLR 103
>XP_016496020.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana
tabacum]
Length = 417
Score = 71.6 bits (174), Expect = 4e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPM--KFSF---RVQCXXXXXXXXXXXXXXXXXXQKTLVSILL 103
HFT + P KL PSK KFSF +V+C L+SIL
Sbjct: 21 HFTLKLPSKLQQQSFPSKLSYKKFSFSTFKVRCCPQQTPENQNST-------SALISILR 73
Query: 102 AIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
IP+WAD+ QE M+KKRSLY HE+WV+HRSSLR
Sbjct: 74 IIPDWADRIQEEGMKKKRSLYKHESWVQHRSSLR 107
>XP_009779200.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana
sylvestris]
Length = 417
Score = 71.6 bits (174), Expect = 4e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPM--KFSF---RVQCXXXXXXXXXXXXXXXXXXQKTLVSILL 103
HFT + P KL PSK KFSF +V+C L+SIL
Sbjct: 21 HFTLKLPSKLQQQSFPSKLSYKKFSFSTFKVRCCPQQTPENQNST-------SALISILR 73
Query: 102 AIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
IP+WAD+ QE M+KKRSLY HE+WV+HRSSLR
Sbjct: 74 IIPDWADRIQEEGMKKKRSLYKHESWVQHRSSLR 107
>XP_016572672.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Capsicum
annuum]
Length = 412
Score = 71.2 bits (173), Expect = 6e-12
Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPMKF-SFRVQCXXXXXXXXXXXXXXXXXXQKTLVSILLAIPN 91
HFT + P KL L K + F SF+V C TLVSIL AIP+
Sbjct: 21 HFTLKKPSKL----LSYKKLTFCSFKVLCSSQPSKTPQNSNLT-----STLVSILRAIPD 71
Query: 90 WADKNQERRMQKKRSLYNHENWVEHRSSLR 1
WADK QE M+KKRSLY HE WV+HRSSLR
Sbjct: 72 WADKIQEGGMRKKRSLYKHETWVQHRSSLR 101
>XP_006345590.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Solanum
tuberosum]
Length = 412
Score = 70.9 bits (172), Expect = 8e-12
Identities = 46/109 (42%), Positives = 56/109 (51%)
Frame = -3
Query: 327 TMRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXX 148
T+++PTN SHFT + P +S P KF+FRV C
Sbjct: 9 TIQSPTNA--------SFSSHFTLKKPS--NSQQQPPVYKKFTFRVLCSSQPSRTPQNSN 58
Query: 147 XXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
TLV IL +P+WADK QE M+KKRSLY HE WV+HRSSLR
Sbjct: 59 LI-----STLVKILRVVPDWADKIQEGGMRKKRSLYKHETWVQHRSSLR 102
>XP_019224728.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Nicotiana
attenuata] OIT33162.1 upf0187 protein, chloroplastic
[Nicotiana attenuata]
Length = 417
Score = 70.9 bits (172), Expect = 8e-12
Identities = 43/94 (45%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Frame = -3
Query: 267 HFTPRTPLKLHSPHLPSKPM--KFSF---RVQCXXXXXXXXXXXXXXXXXXQKTLVSILL 103
HFT + P KL PSK KFSF +V+C L+SIL
Sbjct: 21 HFTLKLPSKLQQQSFPSKLSCKKFSFTTFKVRCCPQQTPQNQNST-------SALISILR 73
Query: 102 AIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
IP+WAD+ QE M+KKRSLY HE+WV+HRSSLR
Sbjct: 74 IIPDWADRIQEGGMKKKRSLYKHESWVQHRSSLR 107
>XP_017244077.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Daucus
carota subsp. sativus] KZM96669.1 hypothetical protein
DCAR_015969 [Daucus carota subsp. sativus]
Length = 407
Score = 70.5 bits (171), Expect = 1e-11
Identities = 47/108 (43%), Positives = 54/108 (50%)
Frame = -3
Query: 324 MRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXXX 145
M PT+P SHFTP T LH SK K R
Sbjct: 1 MSKPTSP-----NLSLPTSHFTPPTFPNLHLSPFSSKIKKTPLR------KILSSQTPSP 49
Query: 144 XXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
+ +V+ILLAIPNWADKNQERRM+ KR LY E+WV+HRSSLR
Sbjct: 50 PSSEQRFDIVNILLAIPNWADKNQERRMKTKRLLYKPEDWVQHRSSLR 97
>XP_004240104.1 PREDICTED: UPF0187 protein At3g61320, chloroplastic [Solanum
lycopersicum]
Length = 412
Score = 70.5 bits (171), Expect = 1e-11
Identities = 46/109 (42%), Positives = 55/109 (50%)
Frame = -3
Query: 327 TMRNPTNPIQXXXXXXXXXSHFTPRTPLKLHSPHLPSKPMKFSFRVQCXXXXXXXXXXXX 148
T+++PTN SHFT + P K S P K +FRV C
Sbjct: 9 TIQSPTNA--------SFSSHFTLKNPSK--SQQQPPVYKKLNFRVLCSSQPSRTPQNSN 58
Query: 147 XXXXXXQKTLVSILLAIPNWADKNQERRMQKKRSLYNHENWVEHRSSLR 1
TLV IL +P+WADK QE M+KKRSLY HE WV+HRSSLR
Sbjct: 59 LI-----STLVKILRVVPDWADKIQEGGMRKKRSLYKHETWVQHRSSLR 102