BLASTX nr result
ID: Panax24_contig00026370
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00026370
(1070 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP66486.1 Retrovirus-related Pol polyprotein from transposon TN... 407 e-128
P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from t... 345 e-105
KYP76811.1 Retrovirus-related Pol polyprotein from transposon TN... 326 3e-98
KYP76810.1 Retrovirus-related Pol polyprotein from transposon TN... 326 3e-98
AAK29467.1 polyprotein-like [Solanum chilense] 325 8e-98
KYP31853.1 Retrovirus-related Pol polyprotein from transposon TN... 321 3e-96
KYP53808.1 Retrovirus-related Pol polyprotein from transposon TN... 295 2e-93
KYP53895.1 Retrovirus-related Pol polyprotein from transposon TN... 291 1e-90
CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera] 305 1e-90
KYP49408.1 Retrovirus-related Pol polyprotein from transposon TN... 283 2e-89
BAA11674.1 unnamed protein product [Nicotiana tabacum] 301 3e-89
KYP60296.1 Retrovirus-related Pol polyprotein from transposon TN... 294 4e-88
AAV88069.1 hypothetical retrotransposon [Ipomoea batatas] 286 1e-83
XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [... 283 5e-83
KYP73265.1 Retrovirus-related Pol polyprotein from transposon TN... 275 1e-82
KYP40135.1 Retrovirus-related Pol polyprotein from transposon TN... 262 9e-82
CAN64589.1 hypothetical protein VITISV_008453 [Vitis vinifera] 274 5e-81
KYP73281.1 Retrovirus-related Pol polyprotein from transposon TN... 258 9e-81
KYP32746.1 Retrovirus-related Pol polyprotein from transposon TN... 253 1e-77
CAN59934.1 hypothetical protein VITISV_001876, partial [Vitis vi... 264 9e-76
>KYP66486.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 407 bits (1047), Expect = e-128
Identities = 196/360 (54%), Positives = 265/360 (73%), Gaps = 4/360 (1%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
+EH+++F+GLV QL + L L+DE+QALLLL SLP+SW+TLVVSLSNSAPEGK+++ MV+
Sbjct: 118 AEHLNDFEGLVMQLISAGLTLEDEMQALLLLGSLPDSWDTLVVSLSNSAPEGKVSLNMVR 177
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRG--SHKGDTXXXXXXXXXXXXXXXQGE 354
+S+ NEE RR++ N ETHALVTE R RS R H+ + E
Sbjct: 178 NSILNEEIRRRDVAKN-ETHALVTERRSRSKSRTPRGHRDHSKSR--------------E 222
Query: 355 TYKCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVT--EDVVILSFGEEECLHV 528
C++C K GH ++NCR K++ ++ + ++NTAAT + +D + L + EC H+
Sbjct: 223 RRSCYNCGKPGHLKKNCRFL--KKEIQDKNQANDRNTAATTSASDDEITLLCNQGECCHI 280
Query: 529 DDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCT 708
+ +W++D+ ASYH PKRE+FTTY+ GDFG+V MGN S+I+GIGD+ +QTGVGCT
Sbjct: 281 AEPDEEWIIDSAASYHCVPKREYFTTYRKGDFGHVNMGNKSTSQIVGIGDIHLQTGVGCT 340
Query: 709 VTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVK 888
+ L+DVRH+PD+RLNLIS LD+EGYE+ G+WKLTKGS+V+A+G CC+LYKT+VK
Sbjct: 341 LILKDVRHIPDIRLNLISVNVLDKEGYEHSMKGGRWKLTKGSLVVAKGKLCCTLYKTYVK 400
Query: 889 MCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+C +LNAVE+D+SPNLWH+RL H+SEKGLQLLAK+SLIP AKG L+PCDYC+FGK HR
Sbjct: 401 VCKGQLNAVENDASPNLWHRRLAHISEKGLQLLAKQSLIPQAKGDFLNPCDYCVFGKHHR 460
>P10978.1 RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease CAA32025.1 unnamed protein product
[Nicotiana tabacum]
Length = 1328
Score = 345 bits (886), Expect = e-105
Identities = 178/360 (49%), Positives = 249/360 (69%), Gaps = 6/360 (1%)
Frame = +1
Query: 7 HMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKDS 186
H++ F GL+ QL+ + + +++E +A+LLL+SLP+S++ L ++ + GK T+++ KD
Sbjct: 121 HLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILH----GKTTIEL-KDV 175
Query: 187 ----LHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGE 354
L NE+ R+K + ++ AL+TE RGRS R S+ +
Sbjct: 176 TSALLLNEKMRKKPE---NQGQALITEGRGRSYQRSSNN----YGRSGARGKSKNRSKSR 228
Query: 355 TYKCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATV--TEDVVILSFGEEECLHV 528
C++CN+ GHF+R+C K K G+ + NTAA V ++VV+ EEEC+H+
Sbjct: 229 VRNCYNCNQPGHFKRDCPN-PRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHL 287
Query: 529 DDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCT 708
+ +WVVDT AS+HATP R+ F Y AGDFG V+MGNT SKI GIGD+CI+T VGCT
Sbjct: 288 SGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCT 347
Query: 709 VTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVK 888
+ L+DVRHVPDLR+NLISG+ALDR+GYE++F + KW+LTKGS+VIA+G A +LY+T+ +
Sbjct: 348 LVLKDVRHVPDLRMNLISGIALDRDGYESYFANQKWRLTKGSLVIAKGVARGTLYRTNAE 407
Query: 889 MCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+C ELNA +D+ S +LWHKR+GHMSEKGLQ+LAK+SLI AKGT + PCDYCLFGKQHR
Sbjct: 408 ICQGELNAAQDEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHR 467
>KYP76811.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 326 bits (836), Expect = 3e-98
Identities = 168/355 (47%), Positives = 224/355 (63%)
Frame = +1
Query: 4 EHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKD 183
EH++ F+GLVNQL+ +++ +DDE+QALLLLSSLP SW+TLVV+LSNSAPEGK+TM V D
Sbjct: 121 EHLNNFKGLVNQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSD 180
Query: 184 SLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYK 363
SL EE+RR E+G + A + ENRG++ RG K
Sbjct: 181 SLLGEESRRMERGESIHPEANIIENRGKNETRGRSKS------RDQYQSRGRSKSRSKIT 234
Query: 364 CFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQKV 543
C++C + GH + CR + QK ED++ + E L++
Sbjct: 235 CYYCGRMGHRKMECRSFKRDQK----------------AEDMLYI-IREGNILNIAYDDS 277
Query: 544 DWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLRD 723
W+VD+GAS+H TP FF++Y++GDFG V+MGN D+SKI+GIGD+ + T GC + L+D
Sbjct: 278 SWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKD 337
Query: 724 VRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSSE 903
VRHVP +RLNLIS LD G N+FG GKWKLTKGS+V+ARG SLY K+C E
Sbjct: 338 VRHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGE 397
Query: 904 LNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+N DD +WHKRLGH+SEKGL +LA++ L+ + KG L PC +CL GKQHR
Sbjct: 398 VNITTDDI--EVWHKRLGHISEKGLHILARKQLLSNVKGKSLDPCAHCLAGKQHR 450
>KYP76810.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 326 bits (836), Expect = 3e-98
Identities = 168/355 (47%), Positives = 224/355 (63%)
Frame = +1
Query: 4 EHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKD 183
EH++ F+GLVNQL+ +++ +DDE+QALLLLSSLP SW+TLVV+LSNSAPEGK+TM V D
Sbjct: 121 EHLNNFKGLVNQLTKIEMKIDDELQALLLLSSLPESWDTLVVTLSNSAPEGKLTMDAVSD 180
Query: 184 SLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYK 363
SL EE+RR E+G + A + ENRG++ RG K
Sbjct: 181 SLLGEESRRMERGESIHPEANIIENRGKNETRGRSKS------RDQYQSRGRSKSRSKIT 234
Query: 364 CFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQKV 543
C++C + GH + CR + QK ED++ + E L++
Sbjct: 235 CYYCGRMGHRKMECRSFKRDQK----------------AEDMLYI-IREGNILNIAYDDS 277
Query: 544 DWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLRD 723
W+VD+GAS+H TP FF++Y++GDFG V+MGN D+SKI+GIGD+ + T GC + L+D
Sbjct: 278 SWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMGNQDRSKIVGIGDIILTTSTGCRLVLKD 337
Query: 724 VRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSSE 903
VRHVP +RLNLIS LD G N+FG GKWKLTKGS+V+ARG SLY K+C E
Sbjct: 338 VRHVPAMRLNLISAGKLDDAGLMNYFGEGKWKLTKGSLVMARGKKEGSLYVMQAKLCKGE 397
Query: 904 LNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+N DD +WHKRLGH+SEKGL +LA++ L+ + KG L PC +CL GKQHR
Sbjct: 398 VNITTDDL--EVWHKRLGHISEKGLHILARKQLLSNVKGKSLDPCAHCLAGKQHR 450
>AAK29467.1 polyprotein-like [Solanum chilense]
Length = 1328
Score = 325 bits (833), Expect = 8e-98
Identities = 169/361 (46%), Positives = 245/361 (67%), Gaps = 7/361 (1%)
Frame = +1
Query: 7 HMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKDS 186
H++ GL+ QL+ + + +++E + ++LL+SLP+S++TL S + GK ++Q+ KD
Sbjct: 122 HLNVLNGLITQLANLGVKIEEEDKRIVLLNSLPSSYDTL----STTILHGKDSIQL-KDV 176
Query: 187 ----LHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGE 354
L NE+ R+K + + +TE+RGRS R S + + +
Sbjct: 177 TSALLLNEKMRKKPE---NHGQVFITESRGRSYQRSS----SNYGRSGARGKSKVRSKSK 229
Query: 355 TYKCFHCNKEGHFRRNCRIWLDKQKNGEQ-GKVEEKNTAATV--TEDVVILSFGEEECLH 525
C++C++ GHF+R+C K+ GE G+ + NTAA V +DVV+L EEEC+H
Sbjct: 230 ARNCYNCDQPGHFKRDCPN--PKRGKGESSGQKNDDNTAAMVQNNDDVVLLINEEEECMH 287
Query: 526 VDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGC 705
+ + +WVVDT ASYHATP R+ F Y AGD+G V+MGNT SKI GIGD+C +T VGC
Sbjct: 288 LAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIAGIGDICFKTNVGC 347
Query: 706 TVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHV 885
T+ L+DVRHVPDLR+NLISG+ALD++GYEN+F + KW+LTKG++VIA+G A +LY+T+
Sbjct: 348 TLVLKDVRHVPDLRMNLISGIALDQDGYENYFANQKWRLTKGALVIAKGVARGTLYRTNA 407
Query: 886 KMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQH 1065
++C ELNA +++S +LWHKR+GH SEKGLQ+L+K+SLI KGT + PC+Y LFGKQH
Sbjct: 408 EICQGELNAAHEENSADLWHKRMGHTSEKGLQILSKKSLISFTKGTTIKPCNYWLFGKQH 467
Query: 1066 R 1068
R
Sbjct: 468 R 468
>KYP31853.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1314
Score = 321 bits (822), Expect = 3e-96
Identities = 169/362 (46%), Positives = 231/362 (63%), Gaps = 7/362 (1%)
Frame = +1
Query: 4 EHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKD 183
EH++ F+GLVNQL ++N+DDE+Q L+L SSLP SW+TL+++LSNSAPEGK+++ V D
Sbjct: 111 EHLNTFKGLVNQLKKAEINIDDEVQTLMLFSSLPESWDTLIITLSNSAPEGKLSLDSVTD 170
Query: 184 SLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYK 363
SL NEE+RR+E+G+N++ A V +NRGRS R KG
Sbjct: 171 SLLNEESRRRERGLNNQFEANVIDNRGRSKNR--EKGGRGKSQGRSKSRTRIC------- 221
Query: 364 CFHCNKEGHFRRNCRIWLDKQKNG-------EQGKVEEKNTAATVTEDVVILSFGEEECL 522
C++C K GH + CR Q+ G + K +E T VT D V L GEE L
Sbjct: 222 CYYCGKPGHRKSECRFLKKDQQAGTVHPDQIDPRKKKEDGTTTAVTSDDVFL-VGEENYL 280
Query: 523 HVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVG 702
++ + W++D+GAS+H TP EFF++Y+ GDFG V+MGN SKI+GIG++ + T G
Sbjct: 281 NIAFDECIWIIDSGASFHVTPHEEFFSSYQKGDFGMVKMGNHVTSKIVGIGEIALMTENG 340
Query: 703 CTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTH 882
+ L++VRHVPD+RLNLIS LD G N F + +WKL++GSM++ARG SLY
Sbjct: 341 NKLMLKEVRHVPDMRLNLISVSKLDEAGMINQFSADRWKLSRGSMIVARGKKEGSLYTMQ 400
Query: 883 VKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQ 1062
K+C ++N V D+S LWH+RLGHMSEKGL++LAK L P+ KG L C+ CL GKQ
Sbjct: 401 GKICKGDMN-VAQDASKELWHRRLGHMSEKGLEILAKDHL-PNIKGQPLESCEDCLAGKQ 458
Query: 1063 HR 1068
HR
Sbjct: 459 HR 460
>KYP53808.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 464
Score = 295 bits (755), Expect = 2e-93
Identities = 152/363 (41%), Positives = 224/363 (61%), Gaps = 7/363 (1%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S H+SEFQG +QL+ + + DD++ L LL+SLP+SWET VS+ ++ P G +++QM K
Sbjct: 17 SNHLSEFQGRYDQLAGVGIKFDDDLLGLFLLNSLPDSWETFRVSMISATPNGDISLQMAK 76
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RRK +G +S + LVTEN GRS + G + +
Sbjct: 77 RGALNEEMRRKTRGTSSYSEVLVTENMGRSQKKEQKSG-------RDKSRSKSISRYKNV 129
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLH----- 525
+C +C+K GH ++NC +W K+ ++GK E++ + V + G+ CL
Sbjct: 130 ECHYCHKIGHIQKNCFLW-KKESKDKKGKHRERDH--NDGDRVTTATCGDLVCLRDYDIV 186
Query: 526 --VDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGV 699
V D+ + W+VD+GA+ H T ++EFFT+Y +GDFG ++MGN SK+IG+GDVC+QT +
Sbjct: 187 NLVSDESM-WIVDSGATLHVTSRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVCLQTNM 245
Query: 700 GCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKT 879
G + L+ V+HVPD+R NLIS LD GY+NHFGSGKWKLTKG++++A+G LY T
Sbjct: 246 GMQLLLKGVKHVPDVRFNLISVQVLDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWT 305
Query: 880 HVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGK 1059
+ +NA+ +SS LWH+RLGH+SEKG+ LAK+ ++ K L C +C+ GK
Sbjct: 306 KALVAKDSVNAMYMESS--LWHRRLGHISEKGMNCLAKKDMLLGLKNVELEKCSHCMAGK 363
Query: 1060 QHR 1068
Q R
Sbjct: 364 QAR 366
>KYP53895.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 556
Score = 291 bits (745), Expect = 1e-90
Identities = 149/363 (41%), Positives = 221/363 (60%), Gaps = 7/363 (1%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S H+SEFQG +QL+ + + DD++ L LL+SLP+SWET VS+ ++ P G +++QM K
Sbjct: 110 SNHLSEFQGRYDQLAGVGIKFDDDLLGLFLLNSLPDSWETFRVSMISATPNGDISLQMAK 169
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RR+ G +S + LV ENRGRS + G + +
Sbjct: 170 SGALNEEMRRRTHGTSSYSEVLVIENRGRSQRKEQKSG-------RDKSRSKSRSRYKNV 222
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLH----- 525
+C +C+K GH ++NC +W K+ ++GK E++ + V + G+ CL
Sbjct: 223 ECHYCHKIGHIQKNCFLW-KKESKDKKGKQRERDH--NDGDRVTTATCGDLVCLRDYDIV 279
Query: 526 --VDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGV 699
V D+ + W+VD+GA+ H T ++E FT+Y GDFG ++MGN SK+IG+GD+C+QT +
Sbjct: 280 NLVSDESM-WIVDSGATLHVTSRKELFTSYTPGDFGVLKMGNDGVSKVIGVGDICLQTNM 338
Query: 700 GCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKT 879
+ LR V+HVPD+R NLIS LD GY+NHFGSGKWKLTKG++++A+G LY T
Sbjct: 339 RMQLLLRGVKHVPDVRFNLISVQVLDDGGYDNHFGSGKWKLTKGNLIVAKGEKNSKLYWT 398
Query: 880 HVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGK 1059
+ +NA+ +SS LWH+RLGH++EKGL LAK+ ++P K L C +C+ GK
Sbjct: 399 KALVAKDSVNAMYMESS--LWHRRLGHINEKGLNCLAKKDMLPGLKNAKLEKCSHCMAGK 456
Query: 1060 QHR 1068
+ R
Sbjct: 457 KTR 459
>CAN75440.1 hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 305 bits (782), Expect = 1e-90
Identities = 159/364 (43%), Positives = 229/364 (62%), Gaps = 8/364 (2%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
++H++ FQG++NQL+ M + ++E+Q L LL +LP+SWET SLSNSAP+G M M +VK
Sbjct: 95 TDHLNTFQGIINQLAGMNIKFEEEVQGLWLLGTLPDSWETFRTSLSNSAPDGIMNMDLVK 154
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
+ NEE RRK QG +S+++ LV GRS RG D
Sbjct: 155 SCVLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGPKNRDRSKSKTNKFA---------NV 205
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNT--------AATVTEDVVILSFGEEE 516
+C +C+ +GH ++ CR +++ +QGKV+EK AT D +I+ + +
Sbjct: 206 ECHYCHLKGHIKKYCR---QLKRDMKQGKVKEKKNDNGGEDDQVATTISDFLIVY--DSD 260
Query: 517 CLHVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTG 696
++ Q+ WV+D GAS HATP+++FFT+Y +GDFG VRMGN +K IG+GDV ++T
Sbjct: 261 VVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVRLETS 320
Query: 697 VGCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYK 876
G +TL++V+H+PD+R+NLIS LD EG+ N F +WKLT+GSMVIA+G SLY
Sbjct: 321 NGTMLTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYL 380
Query: 877 THVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFG 1056
++ S +NAV+DDS+ LWH +LGHMSEKGL +LAK++L+ K L C +CL G
Sbjct: 381 MQARVIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKGSLKRCAHCLAG 440
Query: 1057 KQHR 1068
KQ R
Sbjct: 441 KQTR 444
>KYP49408.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 414
Score = 283 bits (725), Expect = 2e-89
Identities = 146/363 (40%), Positives = 220/363 (60%), Gaps = 7/363 (1%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S H+SEFQG + L+ + + DD++ L LL+SLP+SWET VS+ ++ P G +++QM K
Sbjct: 17 SNHLSEFQGRYDHLAGVGIKFDDDLLGLFLLNSLPDSWETFRVSMISATPNGDISLQMAK 76
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RR+ QG +S + LV ENRGRS + G + +
Sbjct: 77 SGALNEEMRRRTQGTSSYSEVLVIENRGRSQRKEQKSG-------RDKSRSKSRSRYKNV 129
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKN-------TAATVTEDVVILSFGEEEC 519
+C +C+K GH ++N +W K+ ++GK E++ T AT ++ V + + +
Sbjct: 130 ECHYCHKIGHIQKNYFLW-KKESKDKKGKQRERDHNDGDHVTTATCSDLVCLRDY---DI 185
Query: 520 LHVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGV 699
+++ + W++D+GA+ H T ++EFFT+Y GDFG ++MGN SK+IG+GDVC+QT +
Sbjct: 186 VNLVSDESMWIIDSGATLHVTSRKEFFTSYTPGDFGVLKMGNDGVSKVIGVGDVCLQTNM 245
Query: 700 GCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKT 879
G + LR V+HVPD+R NLIS LD GY+N FGSGKWKLTKG++++A+G LY T
Sbjct: 246 GMQLLLRGVKHVPDVRFNLISMQVLDDGGYDNQFGSGKWKLTKGNLIVAKGEKNSKLYWT 305
Query: 880 HVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGK 1059
+ +NA+ +SS LWH+RLGH+SE GL LAK+ ++ K L +C+ GK
Sbjct: 306 KALVAKDSVNAMYMESS--LWHRRLGHISENGLNCLAKKDMLIGLKNVELEKSSHCMAGK 363
Query: 1060 QHR 1068
Q R
Sbjct: 364 QTR 366
>BAA11674.1 unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 301 bits (772), Expect = 3e-89
Identities = 157/363 (43%), Positives = 223/363 (61%), Gaps = 7/363 (1%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
++H++E QG+V+QLS M + DDE+ AL++L++LP SWETL VS++NSAP G + M+ VK
Sbjct: 117 ADHLNEIQGIVDQLSGMGIKFDDEVLALMVLATLPESWETLKVSITNSAPNGVVNMETVK 176
Query: 181 DSLHNEETRRKEQGVNS-ETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGET 357
+ NEE RR+ QG +S ++ L RGRS + D
Sbjct: 177 SGILNEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQSNRDKSRGKSNKFA---------N 227
Query: 358 YKCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDD- 534
+C +C K+GH +R CR + + QK + KV+ + ++ T SFGE ++ DD
Sbjct: 228 VECHYCKKKGHIKRFCRQFQNDQKKNKGKKVKPEESSDDETN-----SFGEFNVVYDDDI 282
Query: 535 -----QKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGV 699
Q++ WV+D+GA+ HATP+RE F++Y GDFG V+MGN + S ++G GDVC++T
Sbjct: 283 INLTTQEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNANFSTVVGKGDVCLETMN 342
Query: 700 GCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKT 879
G + LRDVRHVPD+RLNLIS LD EGY N F +G+WKLTKGS+++ARG LY T
Sbjct: 343 GMKLLLRDVRHVPDMRLNLISVDKLDEEGYCNTFHNGQWKLTKGSLMVARGTKQSKLYVT 402
Query: 880 HVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGK 1059
+ +N E+DS+ LWH+RLGHMSEK + L K++ +P L C CL GK
Sbjct: 403 QASISQQVINVAENDSNIKLWHRRLGHMSEKSMARLVKKNALPGLNQIQLKKCADCLAGK 462
Query: 1060 QHR 1068
Q+R
Sbjct: 463 QNR 465
>KYP60296.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 990
Score = 294 bits (753), Expect = 4e-88
Identities = 152/356 (42%), Positives = 214/356 (60%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S+H++EFQGL++QLS M + DDE L LL++LP SWET VS++NSAP G +++Q K
Sbjct: 58 SDHLNEFQGLLDQLSRMGIKFDDEFLVLWLLNTLPESWETFRVSITNSAPNGVVSLQAKK 117
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RRK QG +S++ LVTENRGRS + G + +
Sbjct: 118 SGAFNEEMRRKAQGSSSQSKVLVTENRGRSQKKEPKGG-------REKSRSKSKSRYKNV 170
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQK 540
+C +C+K H +RNC +W + K + V +++
Sbjct: 171 ECHYCHKTWHIQRNCFLWKKENKGKKVNLVSDESM------------------------- 205
Query: 541 VDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLR 720
W+VD+GA+ H TP++EFFT+Y +GDFG ++MGN SK+IG+GDV +QT +G + LR
Sbjct: 206 --WIVDSGATLHVTPRKEFFTSYTSGDFGVLKMGNDGVSKVIGVGDVFLQTNMGMQLLLR 263
Query: 721 DVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSS 900
V+HVPD+R NLIS LD GY+NHFGSGKWKLTKG++V+ARG LY T +
Sbjct: 264 GVKHVPDVRFNLISVQILDDGGYDNHFGSGKWKLTKGNLVVARGEKNSKLYWTKALVAKD 323
Query: 901 ELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+NA++ ++S LWH+RL H+SEKGL LAK+ ++ K L C +C+ GKQ R
Sbjct: 324 NVNAMDMEAS--LWHRRLSHISEKGLNCLAKKDVLQGLKIAELEKCSHCMAGKQTR 377
>AAV88069.1 hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 286 bits (732), Expect = 1e-83
Identities = 146/358 (40%), Positives = 221/358 (61%), Gaps = 2/358 (0%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
++H+++FQG+++QLS M + +DE+ L LL++LP+SWET VSL+NSAP G +TM+ VK
Sbjct: 117 NDHVNDFQGVLDQLSGMGIKFEDEVLGLWLLNTLPDSWETFRVSLTNSAPNGVVTMEYVK 176
Query: 181 DSLHNEETRRKEQGVN-SETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGET 357
+ NEE RR+ Q + S++ LVT++RGR+ +G D +
Sbjct: 177 SGILNEEARRRSQDTSTSQSDILVTDDRGRNKQKGQRGRDKSRSKSRSRY--------KD 228
Query: 358 YKCFHCNKEGHFRRNCRIWL-DKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDD 534
+C +C K+ H ++ W +K+++ + G + N ATV D+++ ++ ++V
Sbjct: 229 IECHYCGKKSHIKKYSFKWKREKKQDNKDG--DTGNQVATVRADLLVAC--DDNVINVAC 284
Query: 535 QKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVT 714
+ W+VD+GA+YH TP++EFFT+Y GDFG +RMGN Q K+ G G VC++T G +
Sbjct: 285 HETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNGTKLV 344
Query: 715 LRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMC 894
L++V+H PD+RLNLIS LD +G+ FG G WK+TKGS+V+ARG +LY +
Sbjct: 345 LKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQSSVS 404
Query: 895 SSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+N VE + + LWHKRLGHMS KG+ LAK+S + K L C +CL GKQ R
Sbjct: 405 DDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQRR 462
>XP_012075359.1 PREDICTED: uncharacterized protein LOC105636646 [Jatropha curcas]
Length = 1180
Score = 283 bits (724), Expect = 5e-83
Identities = 137/289 (47%), Positives = 191/289 (66%), Gaps = 2/289 (0%)
Frame = +1
Query: 208 RKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYKCFHCNKEG 387
R ++ + ALVTENRG+S RG + E KC+HC KE
Sbjct: 628 RDVASASTSSQALVTENRGQSKSRGPRHVKSGGRSKSR----------EMRKCYHCGKEA 677
Query: 388 HFRRNCRIWLDKQKNGEQGKVEEKNTAATVTED--VVILSFGEEECLHVDDQKVDWVVDT 561
H +RNC + KQ N ++ + ++N +ATV+ + V L + +C HV D +W+VD+
Sbjct: 678 HLKRNCHLL--KQDNADRRQENDRNISATVSREDGEVTLVTHDADCCHVGDADTEWIVDS 735
Query: 562 GASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLRDVRHVPD 741
GASYH K++ +TYK GDFG +++GN +++ IGD+CI+T VGCT+T+++VRH+ +
Sbjct: 736 GASYHCVKKKKI-STYKVGDFGTIKIGNNSVLQVVRIGDICIKTSVGCTLTVKNVRHISN 794
Query: 742 LRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVED 921
LRLNL+S LD+EGY +H G KLTKGS+V+ RG CCSLYKTH +C+ +LN V D
Sbjct: 795 LRLNLLSVSVLDKEGYHHHTGGDNLKLTKGSLVVGRGKLCCSLYKTHAIICAGQLNTVAD 854
Query: 922 DSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
D+SPNLWH+RL H+SE+ L +LAK+SLIP AKG +PCDYCLFG+QHR
Sbjct: 855 DASPNLWHRRLAHVSEQWLNMLAKKSLIPLAKGKT-NPCDYCLFGRQHR 902
>KYP73265.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 728
Score = 275 bits (702), Expect = 1e-82
Identities = 141/356 (39%), Positives = 206/356 (57%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S+H++EFQGL++QL M + DDE+ L LL++LP SWET VS++NSAP G +++Q K
Sbjct: 117 SDHLNEFQGLLDQLFGMGIKFDDEVLGLWLLNTLPESWETFRVSITNSAPNGVISLQAAK 176
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RRK QG +S++ VTENR RS + G + +
Sbjct: 177 SGALNEEMRRKAQGSSSQSEVFVTENRERSQKKEPKGG-------REKSRSKSKSRYKNV 229
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQK 540
+C +C+K GH +RN +W + K + V +++
Sbjct: 230 ECHYCHKIGHIQRNYFLWKKENKGKKVNLVSDESM------------------------- 264
Query: 541 VDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLR 720
W+VD+GA+ H T ++EFFT+Y GDFG +++GN SK+IG+GDVC+QT +G + LR
Sbjct: 265 --WIVDSGATLHVTTRKEFFTSYTFGDFGVLKIGNDGVSKVIGVGDVCLQTNMGMQLLLR 322
Query: 721 DVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSS 900
V H PD+ NLIS L+ GY+ HFGSGKWKLTKG++V+A+G L+ T +
Sbjct: 323 RVNHAPDVHFNLISVQILEDGGYDTHFGSGKWKLTKGNLVVAKGEEISKLFWTKAMVAKD 382
Query: 901 ELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
+NA++ ++S LWH++L H+SEKGL LAK ++ K L C +C+ GKQ R
Sbjct: 383 NVNAMDMEAS--LWHRKLSHISEKGLNCLAKNDVLQGLKSAELEKCSHCMAGKQTR 436
>KYP40135.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 371
Score = 262 bits (670), Expect = 9e-82
Identities = 143/322 (44%), Positives = 203/322 (63%), Gaps = 3/322 (0%)
Frame = +1
Query: 7 HMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKDS 186
H+S FQ LVNQL+TM++ LDDE+ ALLLLS LP SWETLV SLSNSAP GK+T MVKDS
Sbjct: 60 HLSNFQNLVNQLNTMEIVLDDELLALLLLSLLPYSWETLVASLSNSAPNGKLTFNMVKDS 119
Query: 187 LHNEETRRKEQGVNSE-TH--ALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGET 357
NEET+RK QG++S TH AL+ E+R RS+ R SH+ D +
Sbjct: 120 FLNEETKRKGQGMDSSLTHNEALIMESRRRSHQRNSHRYDDRSKSKGRSRTR------KD 173
Query: 358 YKCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQ 537
KCFHCNK GH ++CR + ++K+T V+ V++ + + +++ Q
Sbjct: 174 IKCFHCNKMGHLMKDCR------------EDKDKDTTTIVSNGEVVIVYNDNS-INLALQ 220
Query: 538 KVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTL 717
+ +WV+D+ AS++ T E+FT+Y DFG V+M N SK++ I + ++T +G + L
Sbjct: 221 EYEWVIDSAASFNVTRHYEYFTSYTVSDFGQVKMVNQGVSKVVVIIKMWLETNIG-KLHL 279
Query: 718 RDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCS 897
++VRH+PD+RLNLIS LD GY N+FG+GKWK T+G+ +IA+G +LY T K +
Sbjct: 280 KNVRHIPDMRLNLISVQELDEYGYHNYFGNGKWKCTRGTFMIAKGEKQNTLYWTSTKFST 339
Query: 898 SELNAVEDDSSPNLWHKRLGHM 963
+ N +D +LWHKRL H+
Sbjct: 340 PQANYAIEDYFTSLWHKRLDHL 361
>CAN64589.1 hypothetical protein VITISV_008453 [Vitis vinifera]
Length = 903
Score = 274 bits (700), Expect = 5e-81
Identities = 141/347 (40%), Positives = 211/347 (60%), Gaps = 8/347 (2%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
++H++ FQG++NQL+ M + ++E+Q L LL +LP+SWET SLSNS P+G M M +VK
Sbjct: 13 TDHLNTFQGIINQLAGMDIKFEEEVQGLWLLGTLPDSWETFRTSLSNSTPDGTMNMNLVK 72
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
+ NEE RRK G +S++ LVTE GRS RG D
Sbjct: 73 SCVLNEEMRRKSHGSSSQSDVLVTEKMGRSKSRGPKNRDRSKSKTNKFA---------NV 123
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNT--------AATVTEDVVILSFGEEE 516
+C +C+ +GH R+ C ++ +QGKV++K AT T + +I+ + +
Sbjct: 124 ECHYCHLKGHIRKYCS---QLKRYMKQGKVKDKKNDNDGEDDRVATTTSNFLIVY--DSD 178
Query: 517 CLHVDDQKVDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTG 696
++ Q+ WV+D+ AS HATP+++FFT+Y + DFG V MGN +K IG+ DVC++T
Sbjct: 179 VVNFACQETSWVIDSSASIHATPQKDFFTSYTSSDFGSVMMGNDGSAKAIGMRDVCLETS 238
Query: 697 VGCTVTLRDVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYK 876
G + L++V+H+P++ +NLIS LD EG+ N F +WKLT+GSMV+A+G SLY
Sbjct: 239 NGTMLILKNVKHIPNICMNLISTSKLDDEGFCNIFRDSQWKLTRGSMVVAKGKKRSSLYL 298
Query: 877 THVKMCSSELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLIPSAK 1017
++ S +N V+DD + LWH RL HMSEKGL +LAK++L+ K
Sbjct: 299 MQARVIDSSINVVDDDITIELWHNRLSHMSEKGLMILAKKNLLSGMK 345
>KYP73281.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 321
Score = 258 bits (659), Expect = 9e-81
Identities = 134/331 (40%), Positives = 194/331 (58%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S+H++EFQGL++QL M + DDE+ L LL++LP SWET VS++NSAP G +++Q K
Sbjct: 12 SDHLNEFQGLLDQLFGMGIKFDDEVLGLWLLNTLPESWETFRVSITNSAPNGVISLQAAK 71
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RRK QG +S++ VTENR RS + G + +
Sbjct: 72 SGALNEEMRRKAQGSSSQSEVFVTENRERSQKKEPKGG-------REKSRSKSKSRYKNV 124
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQK 540
+C +C+K GH +RN +W + K + V +++
Sbjct: 125 ECHYCHKIGHIQRNYFLWKKENKGKKVNLVSDESM------------------------- 159
Query: 541 VDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLR 720
W+VD+GA+ H T ++EFFT+Y GDFG +++GN SK+IG+GDVC+QT +G + LR
Sbjct: 160 --WIVDSGATLHVTTRKEFFTSYTFGDFGVLKIGNDGVSKVIGVGDVCLQTNMGMQLLLR 217
Query: 721 DVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSS 900
V H PD+ NLIS L+ GY+ HFGSGKWKLTKG++V+A+G LY T +
Sbjct: 218 RVNHAPDVHFNLISVQILEDGGYDTHFGSGKWKLTKGNLVVAKGEKISKLYWTKALVAKD 277
Query: 901 ELNAVEDDSSPNLWHKRLGHMSEKGLQLLAK 993
+NA++ ++S LWH++L H+SEKGL LAK
Sbjct: 278 NVNAMDMEAS--LWHRKLSHISEKGLNCLAK 306
>KYP32746.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 403
Score = 253 bits (645), Expect = 1e-77
Identities = 137/335 (40%), Positives = 196/335 (58%)
Frame = +1
Query: 1 SEHMSEFQGLVNQLSTMKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVK 180
S+H++EFQGL++QLS M + DDE+ L LL++LP+SWET VS++N AP G +++Q VK
Sbjct: 110 SDHLNEFQGLLDQLSEMGIKFDDEVLGLWLLNTLPDSWETFWVSITNLAPNGIVSLQAVK 169
Query: 181 DSLHNEETRRKEQGVNSETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETY 360
NEE RRK G +S++ LVTEN GRS + S G + +
Sbjct: 170 SGALNEEMRRKAHGFSSQSEVLVTENMGRSLKKESKGG-------REKSRSKSRSRYKNV 222
Query: 361 KCFHCNKEGHFRRNCRIWLDKQKNGEQGKVEEKNTAATVTEDVVILSFGEEECLHVDDQK 540
+C + +K GH +RN +W K +GK +E
Sbjct: 223 ECHYYHKTGHIQRNYFLW----KKENKGKKDES--------------------------- 251
Query: 541 VDWVVDTGASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLR 720
W+V +G + H TP++EFFT+Y +GDFG ++MGN SK G+GDV +QT +G + LR
Sbjct: 252 -IWIVVSGVTLHVTPRKEFFTSYTSGDFGVLKMGNNGVSKARGVGDVFLQTNMGMRLLLR 310
Query: 721 DVRHVPDLRLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSS 900
V+H PD+R NLIS LD Y+N+FGSGKWK TKG++V+ARG LY T +
Sbjct: 311 GVKHAPDVRFNLISVQMLDDGDYDNYFGSGKWKPTKGNLVVARGEKSSKLYWTKALVAKD 370
Query: 901 ELNAVEDDSSPNLWHKRLGHMSEKGLQLLAKRSLI 1005
+NA++ ++S LWH+RL H+SEKGL LAK+ ++
Sbjct: 371 SVNAMDMEAS--LWHRRLSHISEKGLNCLAKKDVL 403
>CAN59934.1 hypothetical protein VITISV_001876, partial [Vitis vinifera]
Length = 1392
Score = 264 bits (674), Expect = 9e-76
Identities = 144/348 (41%), Positives = 206/348 (59%), Gaps = 8/348 (2%)
Frame = +1
Query: 49 MKLNLDDEIQALLLLSSLPNSWETLVVSLSNSAPEGKMTMQMVKDSLHNEETRRKEQGVN 228
M + ++E+Q L LL +LP+SWET SL N A +G M M +VK + NEE RRK QG +
Sbjct: 1 MNIKFEEEVQGLWLLGTLPDSWETFRTSLFNLALDGIMNMDLVKSCVLNEEMRRKSQGSS 60
Query: 229 SETHALVTENRGRSNFRGSHKGDTXXXXXXXXXXXXXXXQGETYKCFHCNKEGHFRRNCR 408
S+++ LVTE RGRS RG D +C +C+ +GH ++ R
Sbjct: 61 SQSNVLVTEKRGRSKSRGPKNRDRSKRKTNKFA---------NVECHYCHLKGHIKKYYR 111
Query: 409 IWLDKQKNGEQGKVEEKNT--------AATVTEDVVILSFGEEECLHVDDQKVDWVVDTG 564
+++ +Q KV+EK T T D +I+ + + ++ Q+ WV+D+G
Sbjct: 112 ---QLKRDMKQEKVKEKKNDNGGEDDQVVTTTSDFLIVY--DSDVVNFACQETSWVIDSG 166
Query: 565 ASYHATPKREFFTTYKAGDFGYVRMGNTDQSKIIGIGDVCIQTGVGCTVTLRDVRHVPDL 744
AS HATP+++FFT+Y +GDFG VRMGN +K IG+GDVC++T G +TL++V+H+PD+
Sbjct: 167 ASIHATPRKDFFTSYTSGDFGSVRMGNDGSAKAIGMGDVCLETSNGTMLTLKNVKHIPDI 226
Query: 745 RLNLISGMALDREGYENHFGSGKWKLTKGSMVIARGAACCSLYKTHVKMCSSELNAVEDD 924
R+NLIS LD EG+ N F +WKLT+GSM ++ S +N V+DD
Sbjct: 227 RMNLISIGKLDDEGFCNTFRDSQWKLTRGSM---------------ARVIDSSINVVDDD 271
Query: 925 SSPNLWHKRLGHMSEKGLQLLAKRSLIPSAKGTVLSPCDYCLFGKQHR 1068
S+ LWH RLGHMSEKGL +LAK++L+ K L C +CL GKQ R
Sbjct: 272 STFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTR 319