BLASTX nr result

ID: Panax24_contig00026273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00026273
         (409 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017242772.1 PREDICTED: protein RETICULATA-RELATED 5, chloropl...    55   5e-06

>XP_017242772.1 PREDICTED: protein RETICULATA-RELATED 5, chloroplastic-like [Daucus
           carota subsp. sativus]
          Length = 770

 Score = 54.7 bits (130), Expect = 5e-06
 Identities = 41/119 (34%), Positives = 55/119 (46%), Gaps = 27/119 (22%)
 Frame = -1

Query: 277 HYHRGFICKPAHVHLHIYHSRRYLSIPPESH-------EFRLLSAKKHRHVI-------- 143
           H  RG    P H++L  Y S  Y    PE         +F+ +   KHR +I        
Sbjct: 4   HTPRGLSSLP-HLNLQFYPSPHYSCTQPECKFRLHSDGDFKFILPTKHRRIINSDDVSSL 62

Query: 142 ------------ACAGQRRNQTEIGEYNGESRQDSITRRRNVLVTPLIAVGACVLKSAV 2
                         AGQ  +  ++  +N   R+DSI RRR+V+V PLIA+GA VLKSAV
Sbjct: 63  AAKKTRKHRRNFISAGQISDSDDVSGHN--RRRDSIARRRDVIVAPLIAIGASVLKSAV 119


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