BLASTX nr result
ID: Panax24_contig00025913
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00025913
(473 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing pr... 81 7e-15
XP_010260149.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 5e-08
XP_010260148.1 PREDICTED: pentatricopeptide repeat-containing pr... 61 5e-08
XP_012082259.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 6e-07
XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing pr... 58 8e-07
XP_016542464.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 1e-06
XP_006388159.1 hypothetical protein POPTR_0308s00210g, partial [... 55 2e-06
XP_011466642.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 3e-06
XP_011466641.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 3e-06
XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing pr... 56 3e-06
XP_006381507.1 pentatricopeptide repeat-containing family protei... 55 5e-06
XP_016652851.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 9e-06
XP_007208081.1 hypothetical protein PRUPE_ppa001520mg [Prunus pe... 55 9e-06
ONI03174.1 hypothetical protein PRUPE_6G243100 [Prunus persica] 55 9e-06
XP_008242918.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 9e-06
XP_011004144.1 PREDICTED: pentatricopeptide repeat-containing pr... 55 9e-06
>XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Daucus carota subsp. sativus] KZM94478.1
hypothetical protein DCAR_017721 [Daucus carota subsp.
sativus]
Length = 827
Score = 80.9 bits (198), Expect = 7e-15
Identities = 49/105 (46%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = -1
Query: 317 MRNTVLIL-CSSIIIPPNSPHDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVRWDM 141
M+NTVL + C SIIIPPNSPH TVRWD+
Sbjct: 1 MKNTVLTVGCCSIIIPPNSPHK------------PSISAKLPQSKPSSSKPLLSTVRWDL 48
Query: 140 TFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
HR+Q L YYA L SKLA+D K DDFLLI+E+V +SGVK S F
Sbjct: 49 PLHRNQKSLRYYAQLDSKLAEDAKLDDFLLIAETVLNSGVKVSDF 93
>XP_010260149.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Nelumbo nucifera]
Length = 748
Score = 61.2 bits (147), Expect = 5e-08
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
VR D+T RH+NRL YYA LASKLA+DGK +DFL+I+E+V SG QFV
Sbjct: 61 VRQDLT-PRHRNRLKYYADLASKLAEDGKLEDFLMIAETVLVSGTPHWQFV 110
>XP_010260148.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Nelumbo nucifera]
Length = 857
Score = 61.2 bits (147), Expect = 5e-08
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
VR D+T RH+NRL YYA LASKLA+DGK +DFL+I+E+V SG QFV
Sbjct: 61 VRQDLT-PRHRNRLKYYADLASKLAEDGKLEDFLMIAETVLVSGTPHWQFV 110
>XP_012082259.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Jatropha curcas] KDP29059.1 hypothetical
protein JCGZ_16448 [Jatropha curcas]
Length = 853
Score = 58.2 bits (139), Expect = 6e-07
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Frame = -1
Query: 317 MRNTVLILCSSIIIPPN-----SPHDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT- 156
MR V++ SSI+ PPN +PH + +
Sbjct: 1 MRELVILSSSSIVTPPNPSSSSTPHHHSPKPRAKSSPHNLFPAPSKSISTVHSRSPPLSS 60
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
R D++ RH++ LNYY LASKLA+DG+ DF +I+ESV SGV+ SQFV
Sbjct: 61 AREDLS--RHKSLLNYYLDLASKLAEDGRLHDFSIIAESVIASGVEASQFV 109
>XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana attenuata]
Length = 903
Score = 57.8 bits (138), Expect = 8e-07
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Frame = -1
Query: 323 LGMRNTVLIL-CSSIIIPPNS----PHDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 159
LGMR ++IL SSI +PPNS PH +
Sbjct: 35 LGMREALVILPSSSITLPPNSSPTPPHHHRSATAKPKPKLKPKQKPIHSPSQLTSQSPLL 94
Query: 158 TV-RWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
+ RWD + + ++ L YYA LASKLAQDG+F+D L+I+ESV SGV ++F
Sbjct: 95 STPRWDSS-SQSRHSLKYYAELASKLAQDGRFNDSLMIAESVVVSGVNAAEF 145
>XP_016542464.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Capsicum annuum]
Length = 860
Score = 57.4 bits (137), Expect = 1e-06
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = -1
Query: 155 VRWDMTFHRHQN--RLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
+RWD H N L YYA LASKLAQDG+F+D L+I+ES+ SGV ++FV
Sbjct: 61 LRWDSPSANHGNCNSLKYYAELASKLAQDGRFNDLLMIAESIVVSGVNAAEFV 113
>XP_006388159.1 hypothetical protein POPTR_0308s00210g, partial [Populus
trichocarpa] ERP47073.1 hypothetical protein
POPTR_0308s00210g, partial [Populus trichocarpa]
Length = 211
Score = 55.5 bits (132), Expect = 2e-06
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1
Query: 134 HRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
H + L+Y+A LASKLA+DG+ DF++I+ESV SGV+PS FV
Sbjct: 65 HNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSSFV 108
>XP_011466642.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Fragaria vesca subsp. vesca]
Length = 826
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -1
Query: 152 RWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
RWD H L+Y+A LASKLA+DGK DF ++ ESV SGVKPSQF
Sbjct: 67 RWDP----HHTHLSYFADLASKLARDGKLHDFSMLLESVVLSGVKPSQF 111
>XP_011466641.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Fragaria vesca subsp. vesca]
Length = 829
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -1
Query: 152 RWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
RWD H L+Y+A LASKLA+DGK DF ++ ESV SGVKPSQF
Sbjct: 67 RWDP----HHTHLSYFADLASKLARDGKLHDFSMLLESVVLSGVKPSQF 111
>XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata] EYU41644.1
hypothetical protein MIMGU_mgv1a001284mg [Erythranthe
guttata]
Length = 847
Score = 56.2 bits (134), Expect = 3e-06
Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 2/49 (4%)
Frame = -1
Query: 143 MTFHRHQNR--LNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
++ +R NR L Y LASKLA+DG F+DFL+ISESV SGVKPS+F+
Sbjct: 59 LSSYRRDNRQSLTYNTELASKLAEDGMFEDFLMISESVVASGVKPSEFL 107
>XP_006381507.1 pentatricopeptide repeat-containing family protein [Populus
trichocarpa] ERP59304.1 pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 828
Score = 55.5 bits (132), Expect = 5e-06
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = -1
Query: 134 HRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
H + L+Y+A LASKLA+DG+ DF++I+ESV SGV+PS FV
Sbjct: 65 HNSSSLLDYHANLASKLAEDGRLQDFVMIAESVIASGVEPSSFV 108
>XP_016652851.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Prunus mume]
Length = 802
Score = 54.7 bits (130), Expect = 9e-06
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
VRWD T + L+Y+A LASKLA+DGKF DF ++ ESV SGV+ S+F
Sbjct: 65 VRWDPT----KKHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEF 110
>XP_007208081.1 hypothetical protein PRUPE_ppa001520mg [Prunus persica]
Length = 809
Score = 54.7 bits (130), Expect = 9e-06
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
VRWD T + L+Y+A LASKLA+DGKF DF ++ ESV SGV+ S+F
Sbjct: 65 VRWDPT----KTHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEF 110
>ONI03174.1 hypothetical protein PRUPE_6G243100 [Prunus persica]
Length = 822
Score = 54.7 bits (130), Expect = 9e-06
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
VRWD T + L+Y+A LASKLA+DGKF DF ++ ESV SGV+ S+F
Sbjct: 65 VRWDPT----KTHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEF 110
>XP_008242918.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Prunus mume]
Length = 824
Score = 54.7 bits (130), Expect = 9e-06
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -1
Query: 155 VRWDMTFHRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQF 6
VRWD T + L+Y+A LASKLA+DGKF DF ++ ESV SGV+ S+F
Sbjct: 65 VRWDPT----KKHLSYFADLASKLARDGKFQDFAMVVESVVLSGVRGSEF 110
>XP_011004144.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Populus euphratica]
Length = 854
Score = 54.7 bits (130), Expect = 9e-06
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = -1
Query: 134 HRHQNRLNYYAGLASKLAQDGKFDDFLLISESVFDSGVKPSQFV 3
H + L+Y+A LASKLA+DG+ DF++++ESV SGV+PS FV
Sbjct: 69 HNSSSLLDYHANLASKLAEDGRLQDFVMLAESVIASGVEPSSFV 112