BLASTX nr result

ID: Panax24_contig00025786 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00025786
         (374 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017241541.1 PREDICTED: transcription initiation factor TFIID ...   159   1e-42
XP_017241540.1 PREDICTED: transcription initiation factor TFIID ...   159   1e-42
KZM99972.1 hypothetical protein DCAR_008727 [Daucus carota subsp...   159   1e-42
KZM95906.1 hypothetical protein DCAR_019148 [Daucus carota subsp...   146   2e-38
XP_017251124.1 PREDICTED: LOW QUALITY PROTEIN: transcription ini...   146   2e-38
CBI21835.3 unnamed protein product, partial [Vitis vinifera]          145   4e-38
XP_019079137.1 PREDICTED: transcription initiation factor TFIID ...   145   4e-38
XP_010656962.1 PREDICTED: transcription initiation factor TFIID ...   145   4e-38
OAY65663.1 Transcription initiation factor TFIID subunit 1 [Anan...   130   5e-37
XP_007225488.1 hypothetical protein PRUPE_ppa000092mg [Prunus pe...   142   9e-37
XP_008218889.1 PREDICTED: transcription initiation factor TFIID ...   142   9e-37
ONI35879.1 hypothetical protein PRUPE_1G559000 [Prunus persica]       142   9e-37
KHN11818.1 Transcription initiation factor TFIID subunit 1-A [Gl...   141   1e-36
XP_010030013.1 PREDICTED: transcription initiation factor TFIID ...   141   1e-36
XP_006587644.1 PREDICTED: transcription initiation factor TFIID ...   141   1e-36
XP_006587643.1 PREDICTED: transcription initiation factor TFIID ...   141   1e-36
XP_006587642.1 PREDICTED: transcription initiation factor TFIID ...   141   1e-36
XP_010030012.1 PREDICTED: transcription initiation factor TFIID ...   141   1e-36
XP_014630134.1 PREDICTED: transcription initiation factor TFIID ...   140   3e-36
KRH62677.1 hypothetical protein GLYMA_04G123500 [Glycine max]         140   3e-36

>XP_017241541.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X2
            [Daucus carota subsp. sativus]
          Length = 1871

 Score =  159 bits (401), Expect = 1e-42
 Identities = 74/83 (89%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            Y RIVK+PMDLSTI+EKVRNLEYKSR DFRHDMWQIT+NAHLYND+RNPGIPPLADQLLE
Sbjct: 1789 YHRIVKRPMDLSTIKEKVRNLEYKSRRDFRHDMWQITYNAHLYNDRRNPGIPPLADQLLE 1848

Query: 183  LCDYLLSENDASLTEAEAGIQSG 251
            LCDYLL+ENDASLT+AEAGI+SG
Sbjct: 1849 LCDYLLAENDASLTDAEAGIESG 1871


>XP_017241540.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X1
            [Daucus carota subsp. sativus]
          Length = 1872

 Score =  159 bits (401), Expect = 1e-42
 Identities = 74/83 (89%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            Y RIVK+PMDLSTI+EKVRNLEYKSR DFRHDMWQIT+NAHLYND+RNPGIPPLADQLLE
Sbjct: 1790 YHRIVKRPMDLSTIKEKVRNLEYKSRRDFRHDMWQITYNAHLYNDRRNPGIPPLADQLLE 1849

Query: 183  LCDYLLSENDASLTEAEAGIQSG 251
            LCDYLL+ENDASLT+AEAGI+SG
Sbjct: 1850 LCDYLLAENDASLTDAEAGIESG 1872


>KZM99972.1 hypothetical protein DCAR_008727 [Daucus carota subsp. sativus]
          Length = 1881

 Score =  159 bits (401), Expect = 1e-42
 Identities = 74/83 (89%), Positives = 81/83 (97%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            Y RIVK+PMDLSTI+EKVRNLEYKSR DFRHDMWQIT+NAHLYND+RNPGIPPLADQLLE
Sbjct: 1799 YHRIVKRPMDLSTIKEKVRNLEYKSRRDFRHDMWQITYNAHLYNDRRNPGIPPLADQLLE 1858

Query: 183  LCDYLLSENDASLTEAEAGIQSG 251
            LCDYLL+ENDASLT+AEAGI+SG
Sbjct: 1859 LCDYLLAENDASLTDAEAGIESG 1881


>KZM95906.1 hypothetical protein DCAR_019148 [Daucus carota subsp. sativus]
          Length = 1417

 Score =  146 bits (369), Expect = 2e-38
 Identities = 67/83 (80%), Positives = 78/83 (93%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            Y RIVK+P+DL TI+EK RNLEYKSR +FRHD+WQIT+NAHLYNDKRNPGIPPLADQLLE
Sbjct: 1335 YHRIVKRPIDLCTIKEKARNLEYKSRREFRHDVWQITYNAHLYNDKRNPGIPPLADQLLE 1394

Query: 183  LCDYLLSENDASLTEAEAGIQSG 251
            LCD+LL+ENDASLT+AEA I++G
Sbjct: 1395 LCDHLLTENDASLTDAEASIENG 1417


>XP_017251124.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor TFIID
            subunit 1-like [Daucus carota subsp. sativus]
          Length = 1481

 Score =  146 bits (369), Expect = 2e-38
 Identities = 67/83 (80%), Positives = 78/83 (93%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            Y RIVK+P+DL TI+EK RNLEYKSR +FRHD+WQIT+NAHLYNDKRNPGIPPLADQLLE
Sbjct: 1399 YHRIVKRPIDLCTIKEKARNLEYKSRREFRHDVWQITYNAHLYNDKRNPGIPPLADQLLE 1458

Query: 183  LCDYLLSENDASLTEAEAGIQSG 251
            LCD+LL+ENDASLT+AEA I++G
Sbjct: 1459 LCDHLLTENDASLTDAEASIENG 1481


>CBI21835.3 unnamed protein product, partial [Vitis vinifera]
          Length = 1798

 Score =  145 bits (367), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 75/81 (92%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I++ PMDLSTIREKVR +EYK+R DFRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1714 YLDIIRDPMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1773

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
            LCDYLLSENDASLTEAEAGI+
Sbjct: 1774 LCDYLLSENDASLTEAEAGIE 1794


>XP_019079137.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X2
            [Vitis vinifera]
          Length = 1881

 Score =  145 bits (367), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 75/81 (92%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I++ PMDLSTIREKVR +EYK+R DFRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1797 YLDIIRDPMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1856

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
            LCDYLLSENDASLTEAEAGI+
Sbjct: 1857 LCDYLLSENDASLTEAEAGIE 1877


>XP_010656962.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X1
            [Vitis vinifera] XP_010656963.1 PREDICTED: transcription
            initiation factor TFIID subunit 1 isoform X1 [Vitis
            vinifera]
          Length = 1946

 Score =  145 bits (367), Expect = 4e-38
 Identities = 68/81 (83%), Positives = 75/81 (92%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I++ PMDLSTIREKVR +EYK+R DFRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1862 YLDIIRDPMDLSTIREKVRKMEYKNREDFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1921

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
            LCDYLLSENDASLTEAEAGI+
Sbjct: 1922 LCDYLLSENDASLTEAEAGIE 1942


>OAY65663.1 Transcription initiation factor TFIID subunit 1 [Ananas comosus]
          Length = 115

 Score =  130 bits (328), Expect = 5e-37
 Identities = 60/81 (74%), Positives = 69/81 (85%)
 Frame = +3

Query: 3   YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
           Y  I+K+PMDLSTIR+KVR++EYK+R DFRHD+WQIT+NAH YND RNP IPPLADQLLE
Sbjct: 31  YFDIIKRPMDLSTIRDKVRSMEYKNREDFRHDVWQITYNAHKYNDGRNPDIPPLADQLLE 90

Query: 183 LCDYLLSENDASLTEAEAGIQ 245
           LCDY L E D  LT AEAGI+
Sbjct: 91  LCDYQLEEYDLELTNAEAGIE 111


>XP_007225488.1 hypothetical protein PRUPE_ppa000092mg [Prunus persica]
          Length = 1849

 Score =  142 bits (357), Expect = 9e-37
 Identities = 66/82 (80%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+++PMDLSTIREKVR +EYKSR  FRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1765 YLDIIERPMDLSTIREKVRKMEYKSREQFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1824

Query: 183  LCDYLLSENDASLTEAEAGIQS 248
            LCDY+L END SLTEAEAGI+S
Sbjct: 1825 LCDYMLVENDESLTEAEAGIES 1846


>XP_008218889.1 PREDICTED: transcription initiation factor TFIID subunit 1 [Prunus
            mume] XP_016647491.1 PREDICTED: transcription initiation
            factor TFIID subunit 1 [Prunus mume]
          Length = 1898

 Score =  142 bits (357), Expect = 9e-37
 Identities = 66/82 (80%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+++PMDLSTIREKVR +EYKSR  FRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1814 YLDIIERPMDLSTIREKVRKMEYKSREQFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1873

Query: 183  LCDYLLSENDASLTEAEAGIQS 248
            LCDY+L END SLTEAEAGI+S
Sbjct: 1874 LCDYMLVENDESLTEAEAGIES 1895


>ONI35879.1 hypothetical protein PRUPE_1G559000 [Prunus persica]
          Length = 1905

 Score =  142 bits (357), Expect = 9e-37
 Identities = 66/82 (80%), Positives = 74/82 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+++PMDLSTIREKVR +EYKSR  FRHD+WQIT+NAH YND RNPGIPPLADQLLE
Sbjct: 1821 YLDIIERPMDLSTIREKVRKMEYKSREQFRHDVWQITYNAHKYNDGRNPGIPPLADQLLE 1880

Query: 183  LCDYLLSENDASLTEAEAGIQS 248
            LCDY+L END SLTEAEAGI+S
Sbjct: 1881 LCDYMLVENDESLTEAEAGIES 1902


>KHN11818.1 Transcription initiation factor TFIID subunit 1-A [Glycine soja]
          Length = 1093

 Score =  141 bits (356), Expect = 1e-36
 Identities = 65/81 (80%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL ++++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1009 YLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1068

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAEAGI+
Sbjct: 1069 YCDYLLNENDDSLTEAEAGIE 1089


>XP_010030013.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X2
            [Eucalyptus grandis]
          Length = 1735

 Score =  141 bits (356), Expect = 1e-36
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+ KPMDLSTIREKVR +EYK+R DFRHD+WQITFNAH YND+RNP IPPLADQLLE
Sbjct: 1654 YLDIIDKPMDLSTIREKVRRMEYKNREDFRHDVWQITFNAHRYNDRRNPQIPPLADQLLE 1713

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
            LCDYLL+END SLTEAE GI+
Sbjct: 1714 LCDYLLNENDESLTEAEEGIE 1734


>XP_006587644.1 PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X3 [Glycine max] KRH39698.1 hypothetical protein
            GLYMA_09G215000 [Glycine max]
          Length = 1841

 Score =  141 bits (356), Expect = 1e-36
 Identities = 65/81 (80%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL ++++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1757 YLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1816

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAEAGI+
Sbjct: 1817 YCDYLLNENDDSLTEAEAGIE 1837


>XP_006587643.1 PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X2 [Glycine max]
          Length = 1877

 Score =  141 bits (356), Expect = 1e-36
 Identities = 65/81 (80%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL ++++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1793 YLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1852

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAEAGI+
Sbjct: 1853 YCDYLLNENDDSLTEAEAGIE 1873


>XP_006587642.1 PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X1 [Glycine max] KRH39697.1 hypothetical protein
            GLYMA_09G215000 [Glycine max]
          Length = 1890

 Score =  141 bits (356), Expect = 1e-36
 Identities = 65/81 (80%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL ++++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1806 YLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1865

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAEAGI+
Sbjct: 1866 YCDYLLNENDDSLTEAEAGIE 1886


>XP_010030012.1 PREDICTED: transcription initiation factor TFIID subunit 1 isoform X1
            [Eucalyptus grandis] KCW56952.1 hypothetical protein
            EUGRSUZ_I02627 [Eucalyptus grandis]
          Length = 1901

 Score =  141 bits (356), Expect = 1e-36
 Identities = 66/81 (81%), Positives = 73/81 (90%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+ KPMDLSTIREKVR +EYK+R DFRHD+WQITFNAH YND+RNP IPPLADQLLE
Sbjct: 1820 YLDIIDKPMDLSTIREKVRRMEYKNREDFRHDVWQITFNAHRYNDRRNPQIPPLADQLLE 1879

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
            LCDYLL+END SLTEAE GI+
Sbjct: 1880 LCDYLLNENDESLTEAEEGIE 1900


>XP_014630134.1 PREDICTED: transcription initiation factor TFIID subunit 1-like
            isoform X3 [Glycine max]
          Length = 1670

 Score =  140 bits (353), Expect = 3e-36
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1586 YLDIIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1645

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAE GI+
Sbjct: 1646 YCDYLLNENDDSLTEAETGIE 1666


>KRH62677.1 hypothetical protein GLYMA_04G123500 [Glycine max]
          Length = 1680

 Score =  140 bits (353), Expect = 3e-36
 Identities = 65/81 (80%), Positives = 72/81 (88%)
 Frame = +3

Query: 3    YLRIVKKPMDLSTIREKVRNLEYKSRLDFRHDMWQITFNAHLYNDKRNPGIPPLADQLLE 182
            YL I+++PMDLS IRE+VRN+EYKSR DFRHDMWQITFNAH YND RNPGIPPLAD LLE
Sbjct: 1596 YLDIIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLE 1655

Query: 183  LCDYLLSENDASLTEAEAGIQ 245
             CDYLL+END SLTEAE GI+
Sbjct: 1656 YCDYLLNENDDSLTEAETGIE 1676


Top