BLASTX nr result

ID: Panax24_contig00025579 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00025579
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_012088362.1 PREDICTED: E3 ubiquitin-protein ligase RING1 [Jat...    54   3e-06
GAV61054.1 Mpv17_PMP22 domain-containing protein/PORR domain-con...    54   7e-06

>XP_012088362.1 PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
           KDP24198.1 hypothetical protein JCGZ_25855 [Jatropha
           curcas]
          Length = 259

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = +1

Query: 1   IVPWVKCHGQCPVCRFAICDRIRAG 75
           IVPWVK HGQCPVCRFAICDRI  G
Sbjct: 204 IVPWVKSHGQCPVCRFAICDRIGGG 228


>GAV61054.1 Mpv17_PMP22 domain-containing protein/PORR domain-containing
           protein/zf-RING_2 domain-containing protein [Cephalotus
           follicularis]
          Length = 517

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 25/62 (40%), Positives = 29/62 (46%)
 Frame = +1

Query: 1   IVPWVKCHGQCPVCRFAICDRIRAGXXXXXXXXXXXXXXXDPIAGELXXXXXXXXXXXXW 180
           IVPWVK HGQCPVCRFA+C+R+R                 + I GEL            W
Sbjct: 453 IVPWVKSHGQCPVCRFALCERLRESVATLNNNNFADVEANNVITGELISIIRAMEEAAIW 512

Query: 181 RN 186
            N
Sbjct: 513 GN 514


Top