BLASTX nr result
ID: Panax24_contig00025420
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00025420
(392 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KZN01502.1 hypothetical protein DCAR_010233 [Daucus carota subsp... 102 1e-22
XP_017241918.1 PREDICTED: putative transcription elongation fact... 102 1e-22
KVH98811.1 KOW-like protein [Cynara cardunculus var. scolymus] 99 1e-21
KZN08579.1 hypothetical protein DCAR_001109 [Daucus carota subsp... 99 2e-21
XP_009391479.1 PREDICTED: putative transcription elongation fact... 93 2e-19
XP_016569564.1 PREDICTED: putative transcription elongation fact... 93 2e-19
XP_004237729.1 PREDICTED: putative transcription elongation fact... 93 2e-19
XP_006356300.1 PREDICTED: putative transcription elongation fact... 93 2e-19
OAY83926.1 putative transcription elongation factor SPT 1 [Anana... 91 8e-19
XP_017701052.1 PREDICTED: putative transcription elongation fact... 89 9e-19
XP_020089834.1 putative transcription elongation factor SPT5 hom... 91 1e-18
XP_020089833.1 putative transcription elongation factor SPT5 hom... 91 1e-18
XP_020089832.1 putative transcription elongation factor SPT5 hom... 91 1e-18
CDP12009.1 unnamed protein product [Coffea canephora] 91 1e-18
XP_020089831.1 putative transcription elongation factor SPT5 hom... 91 1e-18
OAY81058.1 putative transcription elongation factor SPT 1 [Anana... 91 1e-18
ERM97745.1 hypothetical protein AMTR_s03307p00003260 [Amborella ... 85 1e-18
XP_010245838.1 PREDICTED: putative transcription elongation fact... 90 2e-18
XP_018849205.1 PREDICTED: putative transcription elongation fact... 90 2e-18
XP_008788882.1 PREDICTED: putative transcription elongation fact... 89 3e-18
>KZN01502.1 hypothetical protein DCAR_010233 [Daucus carota subsp. sativus]
Length = 1023
Score = 102 bits (253), Expect = 1e-22
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNIFTGS I+ VPIKE TDVLAVESKAIE+ RDTWVRMKIGTYKGDLAKV
Sbjct: 236 EACKGMRNIFTGSKILLVPIKEMTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 291
>XP_017241918.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Daucus carota subsp. sativus]
Length = 1035
Score = 102 bits (253), Expect = 1e-22
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNIFTGS I+ VPIKE TDVLAVESKAIE+ RDTWVRMKIGTYKGDLAKV
Sbjct: 236 EACKGMRNIFTGSKILLVPIKEMTDVLAVESKAIELSRDTWVRMKIGTYKGDLAKV 291
>KVH98811.1 KOW-like protein [Cynara cardunculus var. scolymus]
Length = 1066
Score = 99.0 bits (245), Expect = 1e-21
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKGMRNI+TGS I+ VPIKE TDVL+VESKAI++ RDTWVRMKIGTYKGDLAKV
Sbjct: 246 VKEACKGMRNIYTGSKILLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 303
>KZN08579.1 hypothetical protein DCAR_001109 [Daucus carota subsp. sativus]
Length = 1004
Score = 98.6 bits (244), Expect = 2e-21
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+++ACKGMRNIFTGS I+ VPIKE TDVL+V SKAIE+ +DTWVRMKIGTYKGDLAKV
Sbjct: 239 VTEACKGMRNIFTGSKILLVPIKEMTDVLSVRSKAIELSKDTWVRMKIGTYKGDLAKV 296
>XP_009391479.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Musa acuminata subsp. malaccensis] XP_009391480.1
PREDICTED: putative transcription elongation factor SPT5
homolog 1 [Musa acuminata subsp. malaccensis]
Length = 1031
Score = 93.2 bits (230), Expect = 2e-19
Identities = 42/58 (72%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNIF+ + +M VPIKE TDVL+VESKA+E+ RDTWVRMKIG YKGDLAKV
Sbjct: 230 VKEACKGLRNIFSSAKVMLVPIKEMTDVLSVESKAVELSRDTWVRMKIGIYKGDLAKV 287
>XP_016569564.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Capsicum annuum]
Length = 1036
Score = 93.2 bits (230), Expect = 2e-19
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNI+ + IM VPIKE TDVL+VESKA+++ RDTWVRMK+GTYKGDLAKV
Sbjct: 233 EACKGMRNIYASAKIMLVPIKEMTDVLSVESKAVDLARDTWVRMKMGTYKGDLAKV 288
>XP_004237729.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Solanum lycopersicum] XP_015073537.1 PREDICTED:
putative transcription elongation factor SPT5 homolog 1
[Solanum pennellii]
Length = 1040
Score = 93.2 bits (230), Expect = 2e-19
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNI+ + IM VPIKE TDVL+VESKA+++ RDTWVRMK+GTYKGDLAKV
Sbjct: 235 EACKGMRNIYASAKIMLVPIKEMTDVLSVESKAVDLARDTWVRMKMGTYKGDLAKV 290
>XP_006356300.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Solanum tuberosum]
Length = 1043
Score = 93.2 bits (230), Expect = 2e-19
Identities = 42/56 (75%), Positives = 50/56 (89%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNI+ + IM VPIKE TDVL+VESKA+++ RDTWVRMK+GTYKGDLAKV
Sbjct: 241 EACKGMRNIYASAKIMLVPIKEMTDVLSVESKAVDLARDTWVRMKMGTYKGDLAKV 296
>OAY83926.1 putative transcription elongation factor SPT 1 [Ananas comosus]
Length = 421
Score = 90.5 bits (223), Expect = 8e-19
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 246 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 303
>XP_017701052.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Phoenix dactylifera]
Length = 321
Score = 89.4 bits (220), Expect = 9e-19
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + +M VPIKE TDVL+VESK +++ RDTWVRMKIG YKGDLAKV
Sbjct: 225 VKEACKGLRNIYSSAKVMLVPIKEMTDVLSVESKTVDLSRDTWVRMKIGIYKGDLAKV 282
>XP_020089834.1 putative transcription elongation factor SPT5 homolog 1 isoform X4
[Ananas comosus]
Length = 844
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 236 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 293
>XP_020089833.1 putative transcription elongation factor SPT5 homolog 1 isoform X3
[Ananas comosus]
Length = 856
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 236 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 293
>XP_020089832.1 putative transcription elongation factor SPT5 homolog 1 isoform X2
[Ananas comosus]
Length = 986
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 236 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 293
>CDP12009.1 unnamed protein product [Coffea canephora]
Length = 1035
Score = 90.5 bits (223), Expect = 1e-18
Identities = 43/58 (74%), Positives = 49/58 (84%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +A KGMRNIF + IM VPIKE TDVL+VESKA++I RDTWVRMK GTYKGDLAKV
Sbjct: 231 VKEAIKGMRNIFASAKIMLVPIKEMTDVLSVESKAVDISRDTWVRMKTGTYKGDLAKV 288
>XP_020089831.1 putative transcription elongation factor SPT5 homolog 1 isoform X1
[Ananas comosus]
Length = 1042
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 236 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 293
>OAY81058.1 putative transcription elongation factor SPT 1 [Ananas comosus]
Length = 1132
Score = 90.5 bits (223), Expect = 1e-18
Identities = 40/58 (68%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + IM VPIKE TDVL+VESK++++ RDTWVRMKIG YKGDLAKV
Sbjct: 190 VKEACKGLRNIYSSAKIMLVPIKEMTDVLSVESKSVDLARDTWVRMKIGIYKGDLAKV 247
>ERM97745.1 hypothetical protein AMTR_s03307p00003260 [Amborella trichopoda]
Length = 144
Score = 85.1 bits (209), Expect = 1e-18
Identities = 37/58 (63%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKGMR+I++ + M VPIKE TDVL+V+SK++E+ +DTWVR+K+GTYKGDLAKV
Sbjct: 35 VKEACKGMRHIYSNTKPMLVPIKEMTDVLSVKSKSVELSKDTWVRVKLGTYKGDLAKV 92
>XP_010245838.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Nelumbo nucifera]
Length = 1037
Score = 89.7 bits (221), Expect = 2e-18
Identities = 43/56 (76%), Positives = 51/56 (91%)
Frame = -1
Query: 272 QACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ACKGMRNI++ + +M VPIKE TDVL+VESKAI++ RDTWVRMKIGTYKGDLAKV
Sbjct: 234 EACKGMRNIYS-AKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 288
>XP_018849205.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Juglans regia]
Length = 1039
Score = 89.7 bits (221), Expect = 2e-18
Identities = 43/58 (74%), Positives = 51/58 (87%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNIF+ +M VPIKE TDVL+VESKAI++ RDTWVRMKIGTYKGDLAKV
Sbjct: 236 VKEACKGLRNIFS-QKVMLVPIKEMTDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKV 292
>XP_008788882.1 PREDICTED: putative transcription elongation factor SPT5 homolog 1
[Phoenix dactylifera]
Length = 853
Score = 89.4 bits (220), Expect = 3e-18
Identities = 39/58 (67%), Positives = 50/58 (86%)
Frame = -1
Query: 278 LSQACKGMRNIFTGSNIMFVPIKETTDVLAVESKAIEILRDTWVRMKIGTYKGDLAKV 105
+ +ACKG+RNI++ + +M VPIKE TDVL+VESK +++ RDTWVRMKIG YKGDLAKV
Sbjct: 223 VKEACKGLRNIYSSAKVMLVPIKEMTDVLSVESKTVDLSRDTWVRMKIGIYKGDLAKV 280