BLASTX nr result
ID: Panax24_contig00025217
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00025217
(842 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_012072543.1 PREDICTED: putative RNA polymerase II subunit B1 ... 179 4e-48
XP_018851159.1 PREDICTED: putative RNA polymerase II subunit B1 ... 178 6e-48
KZN04434.1 hypothetical protein DCAR_005271 [Daucus carota subsp... 175 1e-46
XP_017236213.1 PREDICTED: putative RNA polymerase II subunit B1 ... 175 1e-46
XP_002280625.1 PREDICTED: putative RNA polymerase II subunit B1 ... 165 5e-43
CAN62034.1 hypothetical protein VITISV_014731 [Vitis vinifera] 164 7e-43
XP_011087531.1 PREDICTED: putative RNA polymerase II subunit B1 ... 160 2e-41
XP_011087529.1 PREDICTED: putative RNA polymerase II subunit B1 ... 160 2e-41
XP_011087530.1 PREDICTED: putative RNA polymerase II subunit B1 ... 159 5e-41
XP_002521936.1 PREDICTED: putative RNA polymerase II subunit B1 ... 152 2e-38
OAY46782.1 hypothetical protein MANES_06G027100 [Manihot esculen... 152 3e-38
GAV89229.1 RPAP2_Rtr1 domain-containing protein [Cephalotus foll... 151 4e-38
XP_015874753.1 PREDICTED: putative RNA polymerase II subunit B1 ... 150 2e-37
XP_019244916.1 PREDICTED: putative RNA polymerase II subunit B1 ... 148 7e-37
XP_011044665.1 PREDICTED: putative RNA polymerase II subunit B1 ... 148 1e-36
XP_009771016.1 PREDICTED: putative RNA polymerase II subunit B1 ... 146 1e-36
XP_015063149.1 PREDICTED: putative RNA polymerase II subunit B1 ... 147 1e-36
KVI09374.1 Protein of unknown function DUF408 [Cynara cardunculu... 147 2e-36
XP_004230345.1 PREDICTED: putative RNA polymerase II subunit B1 ... 146 2e-36
XP_009771014.1 PREDICTED: putative RNA polymerase II subunit B1 ... 146 2e-36
>XP_012072543.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Jatropha curcas] XP_012072544.1
PREDICTED: putative RNA polymerase II subunit B1 CTD
phosphatase RPAP2 homolog [Jatropha curcas]
XP_012072546.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog [Jatropha
curcas] KDP37902.1 hypothetical protein JCGZ_05341
[Jatropha curcas]
Length = 654
Score = 179 bits (453), Expect = 4e-48
Identities = 115/285 (40%), Positives = 162/285 (56%), Gaps = 5/285 (1%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P KLDE+LR+F +S++ K L N DLGLS LKIQEK ++NVGEVS+EEWIGPSNAIE
Sbjct: 118 PMKLDEILRMFNNLSLDSKN--LVENGDLGLSNLKIQEKIESNVGEVSLEEWIGPSNAIE 175
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVP+RD + K S KN KE S+ KP +++ FN+ DFMSTIIT+DEYSISK PS
Sbjct: 176 GYVPQRDRDFKGSSFKNPKEASKAISTKPVNKQECFFNDMDFMSTIITKDEYSISKAPSG 235
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHP-LRSSKSKPEELNEEKIVIDMNDK 537
GS K +E + + + K + Q + +P H +++S+ +++ I +++DK
Sbjct: 236 SISTGSDMKLQEQRGKETHKGSEAQSS---SPGKHAFVKTSRKSKGGRSKQIIKEELSDK 292
Query: 538 LHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWA 717
+S + +G S++ E E++S +A + WA
Sbjct: 293 DLLSASNYSQTG----SSMNNAEPEEKSGAKQAANLSESMLKPSLKPSGAKKSVHSVTWA 348
Query: 718 DAK--AAGNRSLCEISELEDTAKGFS--HSNLKEDDNSSRFASAE 840
D K A +R+LCE+ E+EDT G S +DN RF SAE
Sbjct: 349 DEKFDNAKSRNLCEVREMEDTKSGLEILDSLENNNDNMLRFESAE 393
>XP_018851159.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Juglans regia] XP_018851160.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Juglans regia] XP_018851161.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Juglans regia] XP_018851162.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Juglans regia]
Length = 664
Score = 178 bits (452), Expect = 6e-48
Identities = 114/288 (39%), Positives = 163/288 (56%), Gaps = 10/288 (3%)
Frame = +1
Query: 7 KLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEGY 186
KL+EVLRLF +S++ K D LG+N DLGLS L IQEK T VGEV +EEW+GPSNAIEGY
Sbjct: 120 KLNEVLRLFGNLSLDSK-DGLGKNGDLGLSGLTIQEKPKTKVGEVPLEEWVGPSNAIEGY 178
Query: 187 VPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPLT 366
VP+R+ ++K+S KN K S+ + K + E D + NE DF+STIIT+DEYS+SK+PS T
Sbjct: 179 VPQRERSSKSSPLKNPKGGSKARHTKLNSETDFVINEMDFISTIITEDEYSVSKMPSGST 238
Query: 367 ENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKP-EELNEEKIVIDMNDKLH 543
+ S +K +E K +V+ K++++Q+ + P + + K + EE + D
Sbjct: 239 KTPSDAKIREPKGKVNCKDLEDQVAICEKPSTPTKNAGERKSRKSKGEESRMATKGDHSI 298
Query: 544 ISEVSNGLSGRKN-CP---SVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXX 711
I GL N CP SV EAE+E+ KA S
Sbjct: 299 I-----GLPSTSNPCPTSSSVSTAEAEEEADIEKAAMSKETTLKSSFKPSGMKKSGRTVT 353
Query: 712 WADAK--AAGNRSLCEISELEDTAKG---FSHSNLKEDDNSSRFASAE 840
WAD K +G+ +LCE+ ++ED + S +++++D RF AE
Sbjct: 354 WADEKVDGSGDGNLCELRDIEDKKEAPERLSAKDVEDNDEKLRFEWAE 401
>KZN04434.1 hypothetical protein DCAR_005271 [Daucus carota subsp. sativus]
Length = 658
Score = 175 bits (443), Expect = 1e-46
Identities = 114/282 (40%), Positives = 159/282 (56%), Gaps = 3/282 (1%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
SK++E++ +F D +G R L + L I+E E+ +GEV +G +NAIEG
Sbjct: 120 SKIEEIMGVFGVRG----NDGVGNKRRLRVEGLTIRENEEVAIGEVV----VGDANAIEG 171
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+ ++ KN+K+V +PS KP ++ D F+EFDFMSTIITQDEYS+ K+ S L
Sbjct: 172 YVPK---GSRGLDGKNQKQVIKPSKKKPAEKNDLNFSEFDFMSTIITQDEYSVFKVSSQL 228
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLH 543
GS S S +V F+EM++Q A+ DH SSK+K EE N++ V+DM D L
Sbjct: 229 LAAGSGSNVNSSGSKVRFEEMNDQFAALGMSSDHASSSSKTKFEEPNQDGDVVDMIDNLS 288
Query: 544 ISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWADA 723
IS SG + P V+ EA K + +GK + N WAD
Sbjct: 289 IS------SGCQGGPGVNVIEARKGALSGKTDERNVGMLKPSLKSLSSKNVTRSVTWADE 342
Query: 724 KAAGNRSLCEISELEDT---AKGFSHSNLKEDDNSSRFASAE 840
K+AGNR L E SELEDT ++G + +N++E+D S R ASAE
Sbjct: 343 KSAGNRRLFEGSELEDTKQDSEGLNRTNMEEND-SLRLASAE 383
>XP_017236213.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Daucus carota subsp. sativus]
Length = 670
Score = 175 bits (443), Expect = 1e-46
Identities = 114/282 (40%), Positives = 159/282 (56%), Gaps = 3/282 (1%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
SK++E++ +F D +G R L + L I+E E+ +GEV +G +NAIEG
Sbjct: 146 SKIEEIMGVFGVRG----NDGVGNKRRLRVEGLTIRENEEVAIGEVV----VGDANAIEG 197
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+ ++ KN+K+V +PS KP ++ D F+EFDFMSTIITQDEYS+ K+ S L
Sbjct: 198 YVPK---GSRGLDGKNQKQVIKPSKKKPAEKNDLNFSEFDFMSTIITQDEYSVFKVSSQL 254
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLH 543
GS S S +V F+EM++Q A+ DH SSK+K EE N++ V+DM D L
Sbjct: 255 LAAGSGSNVNSSGSKVRFEEMNDQFAALGMSSDHASSSSKTKFEEPNQDGDVVDMIDNLS 314
Query: 544 ISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWADA 723
IS SG + P V+ EA K + +GK + N WAD
Sbjct: 315 IS------SGCQGGPGVNVIEARKGALSGKTDERNVGMLKPSLKSLSSKNVTRSVTWADE 368
Query: 724 KAAGNRSLCEISELEDT---AKGFSHSNLKEDDNSSRFASAE 840
K+AGNR L E SELEDT ++G + +N++E+D S R ASAE
Sbjct: 369 KSAGNRRLFEGSELEDTKQDSEGLNRTNMEEND-SLRLASAE 409
>XP_002280625.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Vitis vinifera] XP_010659731.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Vitis vinifera] XP_019080856.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Vitis vinifera] CBI39649.3 unnamed
protein product, partial [Vitis vinifera]
Length = 659
Score = 165 bits (417), Expect = 5e-43
Identities = 106/283 (37%), Positives = 157/283 (55%), Gaps = 5/283 (1%)
Frame = +1
Query: 7 KLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEGY 186
+++ +LRLF E S+ + LG++ DLGLSELKI+E + GEVSME+WIGPSNAIEGY
Sbjct: 120 RINGILRLFGESSLESNKI-LGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGY 178
Query: 187 VPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPLT 366
VP+RD N K + KNRKE S+ S K D K+ + +E DF+ TIIT+DEYSISK L
Sbjct: 179 VPQRDRNLKPKNIKNRKEGSKSSNSKMDSGKNFVIDEMDFVRTIITEDEYSISKSSKGLK 238
Query: 367 ENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLHI 546
+ S +K+KE K + S + +QL+ ++ S+SK E + + D+
Sbjct: 239 DTTSHAKSKEPKEKAS---IGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFST 295
Query: 547 SEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWADAK 726
+EV + S ++ ++ + ++E +T A Q WAD K
Sbjct: 296 AEVPSVPS--QSGSELNGVKGKEEYHTENAAQLGPTKLKSCLKPSGGKKVTRSVTWADEK 353
Query: 727 --AAGNRSLCEISELE---DTAKGFSHSNLKEDDNSSRFASAE 840
+A +R C++ ELE + G ++ +DDN+ RFASAE
Sbjct: 354 MDSADSRDFCKVRELEVKKEDPNGLGDIDVGDDDNALRFASAE 396
>CAN62034.1 hypothetical protein VITISV_014731 [Vitis vinifera]
Length = 659
Score = 164 bits (416), Expect = 7e-43
Identities = 106/283 (37%), Positives = 157/283 (55%), Gaps = 5/283 (1%)
Frame = +1
Query: 7 KLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEGY 186
+++ +LRLF E S+ + LG++ DLGLSELKI+E + GEVSME+WIGPSNAIEGY
Sbjct: 120 RINGILRLFGESSLESNKI-LGKHGDLGLSELKIRENVEKKAGEVSMEDWIGPSNAIEGY 178
Query: 187 VPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPLT 366
VP+RD N K + KN KE S+ S K D K+ + +E DF+STIIT+DEYSISK L
Sbjct: 179 VPQRDRNLKPKNIKNHKEGSKSSNSKMDSGKNFVIDEMDFVSTIITKDEYSISKSSKGLK 238
Query: 367 ENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLHI 546
+ S +K+KE K + S + +QL+ ++ S+SK E + + D+
Sbjct: 239 DTTSHAKSKEPKEKAS---IGDQLSMLEKSAPPIQNDSESKLRESKGRRSRVIFKDEFST 295
Query: 547 SEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWADAK 726
+EV + S ++ ++ + ++E +T A Q WAD K
Sbjct: 296 AEVPSVPS--QSGSELNGVKGKEEYHTENAAQLGPTKPKSSLKPSGGKKVIRSVTWADEK 353
Query: 727 --AAGNRSLCEISELE---DTAKGFSHSNLKEDDNSSRFASAE 840
+A +R C++ ELE + G ++ +DDN+ RFASAE
Sbjct: 354 MDSADSRDFCKVRELEVKKEDPNGLGDIDVGDDDNALRFASAE 396
>XP_011087531.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X3 [Sesamum indicum]
XP_011087533.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog isoform X3
[Sesamum indicum]
Length = 655
Score = 160 bits (406), Expect = 2e-41
Identities = 120/292 (41%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+ L+EVL+LF+ +S++ D +G N DLGLSELKI+EK DT GEVS+EEWIGPSNAI+
Sbjct: 118 PATLNEVLKLFDGLSLDSAVD-MG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAID 175
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIK------PDKEKDTMFNEFDFMSTIITQDEYSI 342
GYVPR + N K S N K+ +R ++ P D + ++ +F STIITQDEYSI
Sbjct: 176 GYVPRNERNLKPKQSSNLKKGARQEQVESEYKHDPPDVADILSSDLNFTSTIITQDEYSI 235
Query: 343 SKLPSPLTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRS-SKSKPEELNEEKIV 519
SK PL K KESK +VS ++++Q ++ P D PL + ++K ++ ++ K V
Sbjct: 236 SK-SVPLV------KDKESKGKVSINDVNSQGNQMEKP-DAPLPNVQETKSKKSDKHKHV 287
Query: 520 IDMNDKLHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXX 699
+DKL I E + G S D T+ E GK S A
Sbjct: 288 TKTDDKLSILEAAAGPSQN------DLTKEENGHRLGKECASGATILKSSLKTSDSKKAT 341
Query: 700 XXXXWADAKAAGN-RSLCEISELEDTAKG---FSHSNLKE-DDNSSRFASAE 840
WADAK G+ ++LCE E++D KG SHS +E D S R ASAE
Sbjct: 342 RSVTWADAKTDGDGQNLCEFREVKD-GKGALVTSHSADQEVGDESYRIASAE 392
>XP_011087529.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Sesamum indicum]
Length = 699
Score = 160 bits (406), Expect = 2e-41
Identities = 120/292 (41%), Positives = 163/292 (55%), Gaps = 12/292 (4%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+ L+EVL+LF+ +S++ D +G N DLGLSELKI+EK DT GEVS+EEWIGPSNAI+
Sbjct: 162 PATLNEVLKLFDGLSLDSAVD-MG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAID 219
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIK------PDKEKDTMFNEFDFMSTIITQDEYSI 342
GYVPR + N K S N K+ +R ++ P D + ++ +F STIITQDEYSI
Sbjct: 220 GYVPRNERNLKPKQSSNLKKGARQEQVESEYKHDPPDVADILSSDLNFTSTIITQDEYSI 279
Query: 343 SKLPSPLTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRS-SKSKPEELNEEKIV 519
SK PL K KESK +VS ++++Q ++ P D PL + ++K ++ ++ K V
Sbjct: 280 SK-SVPLV------KDKESKGKVSINDVNSQGNQMEKP-DAPLPNVQETKSKKSDKHKHV 331
Query: 520 IDMNDKLHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXX 699
+DKL I E + G S D T+ E GK S A
Sbjct: 332 TKTDDKLSILEAAAGPSQN------DLTKEENGHRLGKECASGATILKSSLKTSDSKKAT 385
Query: 700 XXXXWADAKAAGN-RSLCEISELEDTAKG---FSHSNLKE-DDNSSRFASAE 840
WADAK G+ ++LCE E++D KG SHS +E D S R ASAE
Sbjct: 386 RSVTWADAKTDGDGQNLCEFREVKD-GKGALVTSHSADQEVGDESYRIASAE 436
>XP_011087530.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X2 [Sesamum indicum]
Length = 687
Score = 159 bits (403), Expect = 5e-41
Identities = 119/286 (41%), Positives = 162/286 (56%), Gaps = 6/286 (2%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+ L+EVL+LF+ +S++ D +G N DLGLSELKI+EK DT GEVS+EEWIGPSNAI+
Sbjct: 162 PATLNEVLKLFDGLSLDSAVD-MG-NGDLGLSELKIEEKTDTEAGEVSLEEWIGPSNAID 219
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVPR + N K S N K+ +R ++ D + ++ +F STIITQDEYSISK P
Sbjct: 220 GYVPRNERNLKPKQSSNLKKGAR------QEQVDILSSDLNFTSTIITQDEYSISK-SVP 272
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRS-SKSKPEELNEEKIVIDMNDK 537
L K KESK +VS ++++Q ++ P D PL + ++K ++ ++ K V +DK
Sbjct: 273 LV------KDKESKGKVSINDVNSQGNQMEKP-DAPLPNVQETKSKKSDKHKHVTKTDDK 325
Query: 538 LHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWA 717
L I E + G S D T+ E GK S A WA
Sbjct: 326 LSILEAAAGPSQN------DLTKEENGHRLGKECASGATILKSSLKTSDSKKATRSVTWA 379
Query: 718 DAKAAGN-RSLCEISELEDTAKG---FSHSNLKE-DDNSSRFASAE 840
DAK G+ ++LCE E++D KG SHS +E D S R ASAE
Sbjct: 380 DAKTDGDGQNLCEFREVKD-GKGALVTSHSADQEVGDESYRIASAE 424
>XP_002521936.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Ricinus communis] XP_015576516.1
PREDICTED: putative RNA polymerase II subunit B1 CTD
phosphatase RPAP2 homolog [Ricinus communis] EEF40460.1
conserved hypothetical protein [Ricinus communis]
Length = 645
Score = 152 bits (384), Expect = 2e-38
Identities = 109/285 (38%), Positives = 154/285 (54%), Gaps = 5/285 (1%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P KL+E+LR F +++++ + LGR+ DLGLS LKIQEK +TNVG+VS+EEWIGPSNAIE
Sbjct: 118 PIKLNEILRKFNDLTLD--SEGLGRSGDLGLSNLKIQEKSETNVGKVSLEEWIGPSNAIE 175
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVP+ D + S KN KE + KP ++D F++ DF STIIT DEYSISK PS
Sbjct: 176 GYVPQGDRDPNPS-LKNHKEGLKAICKKPVSKQDCFFSDTDFTSTIITNDEYSISKGPSG 234
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKL 540
LT S K +++ + ++ QL+++ D S KSK +EK++ ++L
Sbjct: 235 LTSTASDIKL-QAQTGKGHEGLNAQLSSL-RKQDSIKASRKSKGR--RKEKVI---KEQL 287
Query: 541 HISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWAD 720
+ ++ + S EAE S A N WAD
Sbjct: 288 NFQDLPSS--------SYYTAEAEDISQATGAANLNESVLKPSLKSSGAKRSNRSVTWAD 339
Query: 721 AKA--AGNRSLCEISELEDTAKGFSHS---NLKEDDNSSRFASAE 840
+ AG+R+LCE+ E+E T + S N +D + RF SAE
Sbjct: 340 ERVDNAGSRNLCEVQEMEQTNESHEISESANKGDDGHMLRFESAE 384
>OAY46782.1 hypothetical protein MANES_06G027100 [Manihot esculenta] OAY46783.1
hypothetical protein MANES_06G027100 [Manihot esculenta]
Length = 652
Score = 152 bits (383), Expect = 3e-38
Identities = 109/286 (38%), Positives = 151/286 (52%), Gaps = 6/286 (2%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P KL+++LR+F+ +S++ + LG N DLGLS LKIQEK +VGEVS+EEWIGPSNAIE
Sbjct: 123 PMKLNDILRMFDNLSLD--YECLGENGDLGLSNLKIQEKMVGSVGEVSVEEWIGPSNAIE 180
Query: 181 GYVPRRDHNTKASHSK-NRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPS 357
GY+P+RD + S SK N KE + KP ++D FN+ DFMSTIIT+DEY+ISK PS
Sbjct: 181 GYIPQRDRVSINSPSKDNSKEGPKAKCTKPVNKQDCFFNDMDFMSTIITEDEYNISKAPS 240
Query: 358 PLTENGSSSKAKE-SKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMND 534
GSSS A + +E KE+ L +P H + K + +K+
Sbjct: 241 -----GSSSTASVINVQEQGGKEIREGLKQSSSPGKHGSNKTSRKSQGGKSKKVA---KG 292
Query: 535 KLHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXW 714
L ++ + + + DA E E++S KA + W
Sbjct: 293 DLSSQDLPTSNYSQVSSSASDA-EVEEKSKIKKAANLSEAMLKPSLKAFGAKKSNRSVTW 351
Query: 715 ADAKA-AGNRSLCEISELEDTAKGFSHSNLKE---DDNSSRFASAE 840
AD K AG+R+LCE+ E+ED + + D N F SAE
Sbjct: 352 ADEKIDAGSRNLCEVREMEDKKAVLDTPDSMDGGHDGNMLLFESAE 397
>GAV89229.1 RPAP2_Rtr1 domain-containing protein [Cephalotus follicularis]
Length = 639
Score = 151 bits (381), Expect = 4e-38
Identities = 103/284 (36%), Positives = 147/284 (51%), Gaps = 4/284 (1%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P KL+ ++RLFE +S+ +ED+LG+NRDL L I EK ++N G+VS+E+WIGPSNAIE
Sbjct: 119 PEKLNSIMRLFENLSLQSEEDKLGKNRDL---RLNIHEKTESNAGDVSLEQWIGPSNAIE 175
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVP++ N K S KN +E S S K EK+ + NE DFMS II +DEYSISK SP
Sbjct: 176 GYVPQKKKNYKPSPFKNHREGSNASSRKSISEKNLIINEMDFMSAIILEDEYSISK-SSP 234
Query: 361 LTENGSSSKAKESKREVSFKEMDNQ---LTAVDTPYDHPLRSSKSKPEELNEEKIVIDMN 531
+ N ++K +E K K++++Q L + P + SKP +K I
Sbjct: 235 V--NACNTKTEEPKENEIHKDLEDQFANLALLSAPIEKNSDRKSSKP---RGKKSKIVEK 289
Query: 532 DKLHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXX 711
DKL E+ + + + EAEK+ + KA N
Sbjct: 290 DKLSNPELPSTSNFCQTGSDTSVAEAEKDFHNVKAATPNDLK------------------ 331
Query: 712 WADAKAAGNRSL-CEISELEDTAKGFSHSNLKEDDNSSRFASAE 840
K+AG + ++ + ++ +DDN SRFASAE
Sbjct: 332 -TSLKSAGGKKFNRSVTWADQKIDNVGSRDVDDDDNISRFASAE 374
>XP_015874753.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Ziziphus jujuba]
Length = 731
Score = 150 bits (378), Expect = 2e-37
Identities = 98/259 (37%), Positives = 137/259 (52%), Gaps = 3/259 (1%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
+K+ VL+LFEE + E G DLGLS LKI+EK T VG+V +E W+GPSNAIEG
Sbjct: 123 AKIRSVLKLFEEEDHDDSVLE-GDVGDLGLSGLKIEEKTGTRVGDVDLEHWVGPSNAIEG 181
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+R+ +K SK+ K+ S+ + K KD + NE DFMSTIIT DEYS+SK+ S L
Sbjct: 182 YVPQREQMSKQFASKSPKQESKANSTKTTSTKDLLVNEIDFMSTIITNDEYSVSKMRSGL 241
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDH-PLRSSKSKPEELNEEKIVIDMNDKL 540
T+ K +E KR +S NQ T ++T S+ K + E I + ++L
Sbjct: 242 TDTKFDEKLREPKRNLSGDAAKNQFTVLETSSTTINGNDSERKAIQSKGESSKIALENEL 301
Query: 541 HISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWAD 720
+ E+ + + K+ +AE+E KA SN WAD
Sbjct: 302 GVQELPSTSTRYKSGSHASTGQAEEEPQVEKADISNEATLKPSLKPAGTKKLRRSVTWAD 361
Query: 721 AK--AAGNRSLCEISELED 771
K + G R+L E+ E+ED
Sbjct: 362 EKSDSTGIRNLLEVREIED 380
>XP_019244916.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Nicotiana attenuata] XP_019244917.1
PREDICTED: putative RNA polymerase II subunit B1 CTD
phosphatase RPAP2 homolog [Nicotiana attenuata]
OIT03974.1 putative rna polymerase ii subunit b1 ctd
phosphatase rpap2-like protein [Nicotiana attenuata]
Length = 664
Score = 148 bits (373), Expect = 7e-37
Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
+KL+EVL+LF + ++ ED + N DLGLS+LKIQEK D GEVSMEEW+GPS+AIEG
Sbjct: 119 AKLNEVLKLFVGLHLHSTED-VKENGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEG 177
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+R+ N K + N K+ S+ K EK+ + +E DF STIITQD YSISKLP+P+
Sbjct: 178 YVPQRERNVKPALLNNIKKGSKNKQAKLQNEKNMILHEMDFSSTIITQDGYSISKLPAPV 237
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLH 543
SS K KE++ S++ D ++ + D S + E+ + + DK +
Sbjct: 238 NA-VSSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKV-DKFN 295
Query: 544 ISEVSNGLS----GRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXX 711
EVS+G K+ ++ ++A +E + A + +
Sbjct: 296 TGEVSSGPCQHDVKNKSLEVLNMSDAGREYASDDAREKQS--LRSSLKSSKYKKMARSVT 353
Query: 712 WADAKAAG-----NRSLCEISELEDTAKGFS-HSNLKEDDNSSRFASAE 840
WAD S EISE D A S +N++EDD+S RF SAE
Sbjct: 354 WADENVDNGTGKLTESSSEISEEGDQANRESGPTNMEEDDDSYRFESAE 402
>XP_011044665.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Populus euphratica]
XP_011044666.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog isoform X1
[Populus euphratica]
Length = 733
Score = 148 bits (373), Expect = 1e-36
Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 16/232 (6%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+KL+EVL LF+ ++ E LG+N DLG S LKI+EK + GEVS E+WIGPSNAIE
Sbjct: 118 PAKLNEVLMLFDNFNLG-SEGGLGKNGDLGFSNLKIEEKTEKVEGEVSFEQWIGPSNAIE 176
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVP+RD N+K+ KN KE + K ++D + ++ DF S+IITQDEYSISK PS
Sbjct: 177 GYVPQRDRNSKSLPLKNHKEGLEANTAKQSSKEDFIIDDMDFTSSIITQDEYSISKTPSG 236
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMN--- 531
LT+ + K ++ K + S K Q +A D +K + + ++ + DMN
Sbjct: 237 LTDTNTDKKTQKPKAKGSHKGSKGQSSAHGK--DDSRSETKGAKQSIKQDSFINDMNFTS 294
Query: 532 ------DKLHISEVSNGLSG-------RKNCPSVDATEAEKESYTGKAVQSN 648
D+ IS+ +GL+G +K V +E +S + V S+
Sbjct: 295 TIIITQDEYSISKSPSGLAGTTSKTKKQKQKEKVSQKSSENQSSASRKVDSS 346
Score = 80.5 bits (197), Expect = 2e-13
Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 8/219 (3%)
Frame = +1
Query: 208 TKASHSKNRKEVSRPSY--IKPDKEKDTMFNEFDFMSTII-TQDEYSISKLPSPLTENGS 378
+K S + K+ SR K ++D+ N+ +F STII TQDEYSISK PS L S
Sbjct: 258 SKGQSSAHGKDDSRSETKGAKQSIKQDSFINDMNFTSTIIITQDEYSISKSPSGLAGTTS 317
Query: 379 SSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLHISEVS 558
+K ++ K +VS K +NQ +A + SSK+ ++ E++ + D+L ++S
Sbjct: 318 KTKKQKQKEKVSQKSSENQSSA-----SRKVDSSKTS-RKVKEDRSKGPIKDELSSQDLS 371
Query: 559 NGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXWADAK--AA 732
+ + EA+++S + KA + WAD K ++
Sbjct: 372 SPFDSCQTSSITITAEAKEKSMSEKAAKPVESSLKPSLKTSGAKKLARSVTWADEKVGSS 431
Query: 733 GNRSLCEISELEDTAKG---FSHSNLKEDDNSSRFASAE 840
G+R LCE E+EDT G + + ++DD +F SAE
Sbjct: 432 GSRDLCEDREMEDTKAGPEIVDNIDKRDDDYVLKFESAE 470
>XP_009771016.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X2 [Nicotiana sylvestris]
XP_016508630.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog isoform X2
[Nicotiana tabacum]
Length = 576
Score = 146 bits (369), Expect = 1e-36
Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
+KL+EVL+LF + ++ ED + + DLGLS+LKIQEK D GEVSMEEW+GPS+AIEG
Sbjct: 119 AKLNEVLKLFVGLHLHSTED-VKESGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEG 177
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+R+ N K + N K+ S+ K EK+ + +E DF STIITQD YSISKLP+P+
Sbjct: 178 YVPQRERNLKPALLNNIKKSSKNKQAKLQNEKNMILHEMDFSSTIITQDGYSISKLPAPV 237
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLH 543
SS K KE++ S++ D ++ + D S + E+ + + DK +
Sbjct: 238 NA-VSSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKV-DKFN 295
Query: 544 ISEVSNGLS----GRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXX 711
EVS+G K+ ++ ++A +E + A + +
Sbjct: 296 TGEVSSGPCQHDVKNKSLEVLNMSDAGREYASDDAREKQS--LRSSLKSSKYKKMARSVT 353
Query: 712 WADAKAAG-----NRSLCEISELEDTAKGFS-HSNLKEDDNSSRFASAE 840
WAD S EISE D A S +N++EDD+S RF SAE
Sbjct: 354 WADENVDNGTGKLTESSSEISEKGDQANRESGPTNMEEDDDSYRFESAE 402
>XP_015063149.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Solanum pennellii] XP_015063150.1
PREDICTED: putative RNA polymerase II subunit B1 CTD
phosphatase RPAP2 homolog [Solanum pennellii]
XP_015063151.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog [Solanum
pennellii]
Length = 660
Score = 147 bits (371), Expect = 1e-36
Identities = 107/301 (35%), Positives = 155/301 (51%), Gaps = 21/301 (6%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+KL++VL LF+ + ++ D + N DLG S+LKIQEK D GEVS+EEW+GPSNAIE
Sbjct: 118 PAKLNQVLNLFKGLHLH-SADNVKENGDLGSSKLKIQEKVDLKGGEVSLEEWMGPSNAIE 176
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GY+P+RD + + KN + S+ + + EK+ + NEFDF STIITQDEYS+SK P+P
Sbjct: 177 GYIPQRDRSVNPALLKNINKGSKNKHARLQDEKNMILNEFDFSSTIITQDEYSVSKFPAP 236
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKL 540
+ + SS K KE++ + +K D+ + + D L+ + E +++ DK
Sbjct: 237 VNAD-SSVKFKETQAKTRYKVRDDDVYILGKQVD-ALQLRSGEETEKSDKNTRFLKVDKF 294
Query: 541 HISEVSNGLS---------------GRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXX 675
+ EVS+G S GRK A+ E + SN+
Sbjct: 295 NSGEVSSGPSQHDVKNKSVLIMSDDGRKY-----ASHGEHDKLKSSLKSSNS-------- 341
Query: 676 XXXXXXXXXXXXWADAKAAG-----NRSLCEISELEDTAKGFSHS-NLKEDDNSSRFASA 837
WAD G S +ISE E G S S +++E+D+S RF SA
Sbjct: 342 ----KKMSRSVTWADESIDGGIGKKTESSSKISEYESQDYGGSASTDMEENDDSYRFESA 397
Query: 838 E 840
E
Sbjct: 398 E 398
>KVI09374.1 Protein of unknown function DUF408 [Cynara cardunculus var.
scolymus]
Length = 657
Score = 147 bits (370), Expect = 2e-36
Identities = 109/292 (37%), Positives = 157/292 (53%), Gaps = 13/292 (4%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGE--VSMEEWIGPSNAI 177
+KLD+V+RLF+ +++ E+ LG N D G+ L I+EKE+ +VG VSMEEWIGPSNAI
Sbjct: 127 AKLDKVVRLFDGLTLKA-EEVLGENGDFGMGNLSIKEKEEGSVGGGIVSMEEWIGPSNAI 185
Query: 178 EGYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDE-YSISKLP 354
EGYVP+ D + K K+ K +E+ ++F+E +FMSTIITQD YSISK P
Sbjct: 186 EGYVPQHDRSAKNRTGSKLKD------SKHKREEKSIFDEMNFMSTIITQDNGYSISKEP 239
Query: 355 SPLTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMND 534
S T+ + + +K+S+++++ K D+ LTA S N + + +
Sbjct: 240 SGQTKKTAGAMSKDSRKKMNHKGTDDGLTA-------------SADSSCNAQNVPETNLN 286
Query: 535 KLHISEVSNGLSGRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXXW 714
KL S V + S +N V+ TE+ K GK Q ++ W
Sbjct: 287 KL--SYVPS--SACQNVVDVNVTESVKARICGKEAQPSSSGLKSSLKSSGALRTNHSVTW 342
Query: 715 ADAKAAG--NRSLCEISELE---DTAKGF-----SHSNLKEDDNSSRFASAE 840
AD K G NR+LCE + +E +T+KGF S + +DDN RFASAE
Sbjct: 343 ADEKTDGAHNRTLCEFNGIENEKETSKGFGMIDKSIDDDDDDDNVLRFASAE 394
>XP_004230345.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog [Solanum lycopersicum]
Length = 660
Score = 146 bits (369), Expect = 2e-36
Identities = 107/301 (35%), Positives = 156/301 (51%), Gaps = 21/301 (6%)
Frame = +1
Query: 1 PSKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIE 180
P+KL++VL LF+ + ++ +D + N D G S+LKIQEK D GEVS+EEW+GPSNAIE
Sbjct: 118 PAKLNQVLNLFKGLHLHSLDD-VKENGDRGSSKLKIQEKVDLKGGEVSLEEWMGPSNAIE 176
Query: 181 GYVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSP 360
GYVP+RD + + KN + S+ + + EK+ + NEFDF STIITQDEYS+SK P+P
Sbjct: 177 GYVPQRDRSVNPALLKNINKGSKNKHARLQDEKNMILNEFDFSSTIITQDEYSVSKFPAP 236
Query: 361 LTENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKL 540
+ + S+ K KE++ + +K D+ + + D L+ + E +++ DK
Sbjct: 237 VNAD-SNVKFKETQAKTRYKVRDDDVYILGKQVD-ALQLRSGEETEKSDKNTRFLKVDKF 294
Query: 541 HISEVSNGLS---------------GRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXX 675
+ EVS+G S GRK A+ E + SN+
Sbjct: 295 NSGEVSSGPSQHDVKNKSVLIMSDDGRKY-----ASHGEHDKLKSSLKSSNS-------- 341
Query: 676 XXXXXXXXXXXXWADAKAAG-----NRSLCEISELEDTAKGFSHS-NLKEDDNSSRFASA 837
WAD G S +ISE E A G S S +++E+D+S RF SA
Sbjct: 342 ----KKMSRSVTWADESIDGGIGKKTESSSKISEYESQAYGGSASTDMEENDDSYRFESA 397
Query: 838 E 840
E
Sbjct: 398 E 398
>XP_009771014.1 PREDICTED: putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Nicotiana sylvestris]
XP_009771015.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog isoform X1
[Nicotiana sylvestris] XP_016508615.1 PREDICTED:
putative RNA polymerase II subunit B1 CTD phosphatase
RPAP2 homolog isoform X1 [Nicotiana tabacum]
XP_016508625.1 PREDICTED: putative RNA polymerase II
subunit B1 CTD phosphatase RPAP2 homolog isoform X1
[Nicotiana tabacum]
Length = 664
Score = 146 bits (369), Expect = 2e-36
Identities = 107/289 (37%), Positives = 154/289 (53%), Gaps = 10/289 (3%)
Frame = +1
Query: 4 SKLDEVLRLFEEISVNPKEDELGRNRDLGLSELKIQEKEDTNVGEVSMEEWIGPSNAIEG 183
+KL+EVL+LF + ++ ED + + DLGLS+LKIQEK D GEVSMEEW+GPS+AIEG
Sbjct: 119 AKLNEVLKLFVGLHLHSTED-VKESGDLGLSKLKIQEKVDVKGGEVSMEEWMGPSDAIEG 177
Query: 184 YVPRRDHNTKASHSKNRKEVSRPSYIKPDKEKDTMFNEFDFMSTIITQDEYSISKLPSPL 363
YVP+R+ N K + N K+ S+ K EK+ + +E DF STIITQD YSISKLP+P+
Sbjct: 178 YVPQRERNLKPALLNNIKKSSKNKQAKLQNEKNMILHEMDFSSTIITQDGYSISKLPAPV 237
Query: 364 TENGSSSKAKESKREVSFKEMDNQLTAVDTPYDHPLRSSKSKPEELNEEKIVIDMNDKLH 543
SS K KE++ S++ D ++ + D S + E+ + + DK +
Sbjct: 238 NA-VSSKKVKEAQTRTSYEVRDVDVSILGKQVDALQLHSGEETEKTDSNNRSYKV-DKFN 295
Query: 544 ISEVSNGLS----GRKNCPSVDATEAEKESYTGKAVQSNAXXXXXXXXXXXXXXXXXXXX 711
EVS+G K+ ++ ++A +E + A + +
Sbjct: 296 TGEVSSGPCQHDVKNKSLEVLNMSDAGREYASDDAREKQS--LRSSLKSSKYKKMARSVT 353
Query: 712 WADAKAAG-----NRSLCEISELEDTAKGFS-HSNLKEDDNSSRFASAE 840
WAD S EISE D A S +N++EDD+S RF SAE
Sbjct: 354 WADENVDNGTGKLTESSSEISEKGDQANRESGPTNMEEDDDSYRFESAE 402