BLASTX nr result

ID: Panax24_contig00025135 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00025135
         (381 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017258437.1 PREDICTED: RNA-binding protein 28 [Daucus carota ...    65   7e-10

>XP_017258437.1 PREDICTED: RNA-binding protein 28 [Daucus carota subsp. sativus]
            KZM89611.1 hypothetical protein DCAR_023026 [Daucus
            carota subsp. sativus]
          Length = 1033

 Score = 65.5 bits (158), Expect = 7e-10
 Identities = 46/128 (35%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
 Frame = +1

Query: 1    QVQQQGSRHDAKNVRQSFESHKLDAHPNLLRKRTFRGDIAPSNTSGTTRENEVEHD-LEG 177
            Q Q QGS  DAK+ ++SF+SH  D   ++ R     GD     +    REN+ EH+ LEG
Sbjct: 844  QFQLQGSGQDAKSTQRSFDSHLRDNRSSMSRSG---GDFTSFKSVEPRRENKKEHEALEG 900

Query: 178  AGSEEGKFNKRHKPSPSRTXXXXXXXXXXXXQEAMNIQKGRKPDGGQSLDAVSEAVTRKS 357
            A +E GKFN+R K SP +              E +    GRKP+ G +  AVSE     S
Sbjct: 901  AAAE-GKFNRRQKLSPIK--WEKKNDLKYNDSEEVRRPNGRKPNDGVTPHAVSEVRANNS 957

Query: 358  KPLEEAEE 381
            +P ++  +
Sbjct: 958  RPGDDGRK 965


Top