BLASTX nr result

ID: Panax24_contig00025086 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00025086
         (416 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_008237721.1 PREDICTED: uncharacterized protein LOC103336456 [...    53   4e-06

>XP_008237721.1 PREDICTED: uncharacterized protein LOC103336456 [Prunus mume]
          Length = 741

 Score = 52.8 bits (125), Expect(2) = 4e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 2/41 (4%)
 Frame = +2

Query: 218 GMFRTVLICFERFAYHRPDISHKQFGLKE--SCLHRPLVEL 334
           GM RT+L+C+E+  YHRPD+S KQFG++E  + + RPLVEL
Sbjct: 311 GMSRTILLCYEKAVYHRPDLSPKQFGIQEVNTNMLRPLVEL 351



 Score = 25.0 bits (53), Expect(2) = 4e-06
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +1

Query: 136 IVWQPYKRFTKD*GFLTNSC 195
           IVWQPYKR   D  FL   C
Sbjct: 287 IVWQPYKRLPCD--FLPQYC 304


Top