BLASTX nr result

ID: Panax24_contig00025036 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00025036
         (461 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AAD22368.1 putative non-LTR retroelement reverse transcriptase [...    55   7e-06

>AAD22368.1 putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 25/47 (53%), Positives = 33/47 (70%)
 Frame = +1

Query: 319 DSWVKINSDCASRGNRGWQAAGGLISNEGGAWLG*RGFIKFLGWCSA 459
           D WVK+N+D ASRGN G+  AGG++ +  GAW+G  GF   +G CSA
Sbjct: 158 DGWVKLNTDGASRGNPGFATAGGVLRDHNGAWIG--GFAVNIGVCSA 202


Top