BLASTX nr result

ID: Panax24_contig00024952 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00024952
         (597 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006369073.1 hypothetical protein POPTR_0001s16200g [Populus t...    58   1e-06
AAN08254.1 hypothetical protein [Oryza sativa Japonica Group]          55   2e-06
AAF02854.1 Unknown protein [Arabidopsis thaliana]                      56   7e-06

>XP_006369073.1 hypothetical protein POPTR_0001s16200g [Populus trichocarpa]
           ERP65642.1 hypothetical protein POPTR_0001s16200g
           [Populus trichocarpa]
          Length = 593

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   RKHTPETLQRIRERTRLAMQDPKVMSYQE 88
           RKH+PETLQ+IRERTRLAMQDPKVMSYQ+
Sbjct: 125 RKHSPETLQKIRERTRLAMQDPKVMSYQD 153


>AAN08254.1 hypothetical protein [Oryza sativa Japonica Group]
          Length = 162

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +2

Query: 2   RKHTPETLQRIRERTRLAMQDPKVMSYQ 85
           RKHTPETLQRIRERTR+AMQDPKV SY+
Sbjct: 117 RKHTPETLQRIRERTRIAMQDPKVKSYK 144


>AAF02854.1 Unknown protein [Arabidopsis thaliana]
          Length = 603

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 24/29 (82%), Positives = 29/29 (100%)
 Frame = +2

Query: 2   RKHTPETLQRIRERTRLAMQDPKVMSYQE 88
           RKH+PETLQ+IRERT++AMQDPKVMSYQ+
Sbjct: 126 RKHSPETLQKIRERTKIAMQDPKVMSYQD 154


Top