BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00024791
         (610 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017254413.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   114   2e-26
EOY10725.1 RNA-binding family protein isoform 6 [Theobroma cacao]     101   9e-22
XP_007030220.2 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   101   1e-21
EOY10720.1 RNA-binding family protein isoform 1 [Theobroma cacao...   101   1e-21
EOY10723.1 RNA-binding family protein isoform 4 [Theobroma cacao]     101   1e-21
XP_016672939.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...   101   2e-21
OMP06725.1 hypothetical protein CCACVL1_01454, partial [Corchoru...    98   3e-21
KHF98520.1 RNA-binding 40 [Gossypium arboreum]                         98   2e-20
XP_016672947.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    98   3e-20
XP_016753544.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    97   7e-20
OMP05704.1 hypothetical protein COLO4_08630 [Corchorus olitorius]      96   1e-19
KVH90700.1 Nucleotide-binding, alpha-beta plait [Cynara carduncu...    95   2e-19
KJB44707.1 hypothetical protein B456_007G267600 [Gossypium raimo...    92   2e-18
XP_012492649.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    92   2e-18
XP_017977954.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    92   3e-18
XP_017627472.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    92   4e-18
KJB44705.1 hypothetical protein B456_007G267600, partial [Gossyp...    84   2e-15
XP_018674191.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    83   5e-15
XP_011034421.1 PREDICTED: U11/U12 small nuclear ribonucleoprotei...    82   7e-15
XP_002319145.2 hypothetical protein POPTR_0013s05120g [Populus t...    82   7e-15

>XP_017254413.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Daucus carota subsp. sativus] XP_017254414.1 PREDICTED:
           U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Daucus carota subsp. sativus]
          Length = 473

 Score =  114 bits (286), Expect = 2e-26
 Identities = 57/81 (70%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEA--MSKPADEGAAASLLIRHLPEAIPYDTLHRIF 546
           M+GVPP+Q F+ PQ P +YGYQGV E   M K A++G A +LLIRHLPEA+P DTLHR+F
Sbjct: 1   MSGVPPAQLFV-PQAPQNYGYQGVVEVQPMQKAAEDGVA-TLLIRHLPEAVPNDTLHRLF 58

Query: 547 SHYGASSVRSCTSGRLRNCAF 609
           S+YGAS+VRSCTSGRLRNCAF
Sbjct: 59  SYYGASAVRSCTSGRLRNCAF 79


>EOY10725.1 RNA-binding family protein isoform 6 [Theobroma cacao]
          Length = 436

 Score =  101 bits (252), Expect = 9e-22
 Identities = 51/79 (64%), Positives = 59/79 (74%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA VP SQ F  PQ   H+GYQGV    S P +  +  +LLIRHLPEAIP+DTL R+FSH
Sbjct: 1   MAAVPSSQPFSNPQ-MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>XP_007030220.2 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           isoform X1 [Theobroma cacao]
          Length = 479

 Score =  101 bits (252), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 59/79 (74%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA VP SQ F  PQ   H+GYQGV    S P +  +  +LLIRHLPEAIP+DTL R+FSH
Sbjct: 1   MAAVPSSQPFSNPQ-MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>EOY10720.1 RNA-binding family protein isoform 1 [Theobroma cacao] EOY10721.1
           RNA-binding family protein isoform 1 [Theobroma cacao]
           EOY10722.1 RNA-binding family protein isoform 1
           [Theobroma cacao]
          Length = 479

 Score =  101 bits (252), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 59/79 (74%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA VP SQ F  PQ   H+GYQGV    S P +  +  +LLIRHLPEAIP+DTL R+FSH
Sbjct: 1   MAAVPSSQPFSNPQ-MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>EOY10723.1 RNA-binding family protein isoform 4 [Theobroma cacao]
          Length = 487

 Score =  101 bits (252), Expect = 1e-21
 Identities = 51/79 (64%), Positives = 59/79 (74%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA VP SQ F  PQ   H+GYQGV    S P +  +  +LLIRHLPEAIP+DTL R+FSH
Sbjct: 1   MAAVPSSQPFSNPQ-MQHFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>XP_016672939.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
           protein-like isoform X1 [Gossypium hirsutum]
          Length = 521

 Score =  101 bits (251), Expect = 2e-21
 Identities = 52/83 (62%), Positives = 60/83 (72%)
 Frame = +1

Query: 361 C*CLMAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHR 540
           C  LMA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R
Sbjct: 39  CDALMAAIPSSQPFSSPQIQ-QFGYQGVEGATSNPLGADSVATLLIRHLPEAIPPETLLR 97

Query: 541 IFSHYGASSVRSCTSGRLRNCAF 609
           +FSHYGASSVR C+SG+LRNCAF
Sbjct: 98  LFSHYGASSVRPCSSGKLRNCAF 120


>OMP06725.1 hypothetical protein CCACVL1_01454, partial [Corchorus capsularis]
          Length = 298

 Score = 98.2 bits (243), Expect = 3e-21
 Identities = 48/79 (60%), Positives = 58/79 (73%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ   H+ YQG   A S P +   A +LL+RHLPEAIP+DTL R+FSH
Sbjct: 1   MAAIPSSQPFSHPQ-MQHFVYQGAEGATSNPQELDYAVTLLVRHLPEAIPHDTLSRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C++G+LRNCAF
Sbjct: 60  YGASSVRPCSTGKLRNCAF 78


>KHF98520.1 RNA-binding 40 [Gossypium arboreum]
          Length = 464

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 50/79 (63%), Positives = 58/79 (73%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSH
Sbjct: 1   MAAIPSSQPFSSPQIQ-QFGYQGVEGATSNPLGADSVATLLIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>XP_016672947.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
           protein-like isoform X2 [Gossypium hirsutum]
           XP_016672955.1 PREDICTED: U11/U12 small nuclear
           ribonucleoprotein 65 kDa protein-like isoform X2
           [Gossypium hirsutum] XP_016672963.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein-like
           isoform X2 [Gossypium hirsutum]
          Length = 479

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 50/79 (63%), Positives = 58/79 (73%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSH
Sbjct: 1   MAAIPSSQPFSSPQIQ-QFGYQGVEGATSNPLGADSVATLLIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>XP_016753544.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
           protein-like [Gossypium hirsutum] XP_016753545.1
           PREDICTED: U11/U12 small nuclear ribonucleoprotein 65
           kDa protein-like [Gossypium hirsutum]
          Length = 479

 Score = 96.7 bits (239), Expect = 7e-20
 Identities = 49/79 (62%), Positives = 58/79 (73%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSH
Sbjct: 1   MAAIPSSQPFSSPQ-MQQFGYQGVEGATSNPIGADSVATLLIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSV+ C+SG+LRNCAF
Sbjct: 60  YGASSVQPCSSGKLRNCAF 78


>OMP05704.1 hypothetical protein COLO4_08630 [Corchorus olitorius]
          Length = 483

 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 48/79 (60%), Positives = 56/79 (70%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA VP SQ F  PQ   H  YQG   A S P +     +LL+RHLPEAIP+DTL R+FSH
Sbjct: 1   MAAVPSSQPFSHPQ-MQHSVYQGAERATSNPQELDYVVTLLVRHLPEAIPHDTLSRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C++G+LRNCAF
Sbjct: 60  YGASSVRPCSTGKLRNCAF 78


>KVH90700.1 Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 475

 Score = 95.1 bits (235), Expect = 2e-19
 Identities = 47/80 (58%), Positives = 56/80 (70%)
 Frame = +1

Query: 370 LMAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFS 549
           LMA VPP Q     Q    Y YQ + E  S+P ++  A +LLIRHLPEAIP+DTL R+FS
Sbjct: 46  LMANVPPFQLPANSQGMYDYAYQNMGEVSSRPPEK-EAVTLLIRHLPEAIPHDTLSRLFS 104

Query: 550 HYGASSVRSCTSGRLRNCAF 609
           HYGAS V  CT+GR+RNCAF
Sbjct: 105 HYGASRVHPCTTGRMRNCAF 124


>KJB44707.1 hypothetical protein B456_007G267600 [Gossypium raimondii]
          Length = 478

 Score = 92.4 bits (228), Expect = 2e-18
 Identities = 48/79 (60%), Positives = 57/79 (72%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSH
Sbjct: 1   MAAIPSSQPFSSPQ-MQQFGYQGVEGATSNPIGADSVATLLIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSV+  +SG+LRNCAF
Sbjct: 60  YGASSVQPFSSGKLRNCAF 78


>XP_012492649.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium raimondii] XP_012492650.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium raimondii] XP_012492651.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium raimondii] KJB44703.1 hypothetical protein
           B456_007G267600 [Gossypium raimondii] KJB44704.1
           hypothetical protein B456_007G267600 [Gossypium
           raimondii] KJB44708.1 hypothetical protein
           B456_007G267600 [Gossypium raimondii]
          Length = 479

 Score = 92.4 bits (228), Expect = 2e-18
 Identities = 48/79 (60%), Positives = 57/79 (72%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +P SQ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSH
Sbjct: 1   MAAIPSSQPFSSPQ-MQQFGYQGVEGATSNPIGADSVATLLIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSV+  +SG+LRNCAF
Sbjct: 60  YGASSVQPFSSGKLRNCAF 78


>XP_017977954.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           isoform X2 [Theobroma cacao]
          Length = 465

 Score = 92.0 bits (227), Expect = 3e-18
 Identities = 42/62 (67%), Positives = 50/62 (80%)
 Frame = +1

Query: 424 HYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSHYGASSVRSCTSGRLRNC 603
           H+GYQGV    S P +  +  +LLIRHLPEAIP+DTL R+FSHYGASSVR C+SG+LRNC
Sbjct: 3   HFGYQGVEGTTSNPHELESVTTLLIRHLPEAIPHDTLLRLFSHYGASSVRPCSSGKLRNC 62

Query: 604 AF 609
           AF
Sbjct: 63  AF 64


>XP_017627472.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium arboreum] XP_017627473.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium arboreum] XP_017627474.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein
           [Gossypium arboreum]
          Length = 479

 Score = 91.7 bits (226), Expect = 4e-18
 Identities = 48/79 (60%), Positives = 56/79 (70%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA +  SQ F  PQ    +GYQGV  A S P    + A+L IRHLPEAIP +TL R+FSH
Sbjct: 1   MAAILSSQPFSSPQIQ-QFGYQGVEGATSNPLGADSVATLWIRHLPEAIPPETLLRLFSH 59

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGASSVR C+SG+LRNCAF
Sbjct: 60  YGASSVRPCSSGKLRNCAF 78


>KJB44705.1 hypothetical protein B456_007G267600, partial [Gossypium raimondii]
           KJB44706.1 hypothetical protein B456_007G267600, partial
           [Gossypium raimondii]
          Length = 497

 Score = 84.0 bits (206), Expect = 2e-15
 Identities = 44/73 (60%), Positives = 53/73 (72%)
 Frame = +1

Query: 391 SQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSHYGASSV 570
           S+ F  PQ    +GYQGV  A S P    + A+LLIRHLPEAIP +TL R+FSHYGASSV
Sbjct: 25  SKPFSSPQ-MQQFGYQGVEGATSNPIGADSVATLLIRHLPEAIPPETLLRLFSHYGASSV 83

Query: 571 RSCTSGRLRNCAF 609
           +  +SG+LRNCAF
Sbjct: 84  QPFSSGKLRNCAF 96


>XP_018674191.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Musa acuminata subsp. malaccensis] XP_018674192.1
           PREDICTED: U11/U12 small nuclear ribonucleoprotein 65
           kDa protein [Musa acuminata subsp. malaccensis]
           XP_018674193.1 PREDICTED: U11/U12 small nuclear
           ribonucleoprotein 65 kDa protein [Musa acuminata subsp.
           malaccensis] XP_018674194.1 PREDICTED: U11/U12 small
           nuclear ribonucleoprotein 65 kDa protein [Musa acuminata
           subsp. malaccensis] XP_018674195.1 PREDICTED: U11/U12
           small nuclear ribonucleoprotein 65 kDa protein [Musa
           acuminata subsp. malaccensis] XP_018674196.1 PREDICTED:
           U11/U12 small nuclear ribonucleoprotein 65 kDa protein
           [Musa acuminata subsp. malaccensis] XP_018674197.1
           PREDICTED: U11/U12 small nuclear ribonucleoprotein 65
           kDa protein [Musa acuminata subsp. malaccensis]
          Length = 469

 Score = 82.8 bits (203), Expect = 5e-15
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = +1

Query: 385 PPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSHYGAS 564
           PP +  + P  PP+      AE  S  A   AAA+LL+RHLPEA+P+D L R+FSHYGAS
Sbjct: 13  PPHEPRMAPPPPPNS--VPAAEGSSGGAGVAAAATLLVRHLPEAMPFDVLSRLFSHYGAS 70

Query: 565 SVRSCTSGRLRNCAF 609
           SVR C  GRLRNC F
Sbjct: 71  SVRPCAGGRLRNCTF 85


>XP_011034421.1 PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa
           protein-like [Populus euphratica]
          Length = 479

 Score = 82.4 bits (202), Expect = 7e-15
 Identities = 42/79 (53%), Positives = 52/79 (65%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA  P +Q F       ++G+QG  E  ++  D     +LLI+HLPE IP+DTL R+FSH
Sbjct: 1   MAAFPSAQNFTNTH-MQNFGFQGT-EVKAESVDSQVIVTLLIKHLPEDIPFDTLSRLFSH 58

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGA SVR C SGRLRNCAF
Sbjct: 59  YGACSVRPCNSGRLRNCAF 77


>XP_002319145.2 hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
           EEE95068.2 hypothetical protein POPTR_0013s05120g
           [Populus trichocarpa]
          Length = 479

 Score = 82.4 bits (202), Expect = 7e-15
 Identities = 42/79 (53%), Positives = 53/79 (67%)
 Frame = +1

Query: 373 MAGVPPSQFFIQPQDPPHYGYQGVAEAMSKPADEGAAASLLIRHLPEAIPYDTLHRIFSH 552
           MA  P +Q F   Q   ++G+QG  E  ++  +     +LLI+HLPE IP+DTL R+FSH
Sbjct: 1   MAAFPSAQNFTNTQ-MQNFGFQGT-EVKAESVESQVIVTLLIKHLPEDIPFDTLSRLFSH 58

Query: 553 YGASSVRSCTSGRLRNCAF 609
           YGA SVR C SGRLRNCAF
Sbjct: 59  YGAFSVRPCNSGRLRNCAF 77