BLASTX nr result

ID: Panax24_contig00024704 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00024704
         (1251 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006421013.1 hypothetical protein CICLE_v10006377mg [Citrus cl...    86   3e-17
ACU23295.1 unknown [Glycine max]                                       64   9e-10
XP_003629607.2 hypothetical protein MTR_8g081570 [Medicago trunc...    53   1e-09
XP_003601656.2 rhodanese/cell cycle control phosphatase superfam...    53   2e-06
XP_013461206.1 rhodanese/cell cycle control phosphatase superfam...    53   2e-06
KVI08263.1 hypothetical protein Ccrd_013365 [Cynara cardunculus ...    51   8e-06

>XP_006421013.1 hypothetical protein CICLE_v10006377mg [Citrus clementina]
           ESR34253.1 hypothetical protein CICLE_v10006377mg
           [Citrus clementina]
          Length = 71

 Score = 85.5 bits (210), Expect = 3e-17
 Identities = 42/62 (67%), Positives = 45/62 (72%)
 Frame = +3

Query: 90  YPGGGNGKQRDIAQKPAISKPRTVEKRKCFYYFQVALFQ*RKEPATILLSMHHVLAFISS 269
           YPGGGNGKQRDIAQ   I K    +KRK   YF VALFQ R EP T+LLSMHHV  FISS
Sbjct: 7   YPGGGNGKQRDIAQNAGIQKANIFDKRKSLNYFPVALFQERNEPVTMLLSMHHVPTFISS 66

Query: 270 FH 275
           F+
Sbjct: 67  FN 68


>ACU23295.1 unknown [Glycine max]
          Length = 60

 Score = 64.3 bits (155), Expect = 9e-10
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = -2

Query: 248 MVHGQEYSCWLLPLLEQCYLKVIEAFSFLNGPWFAYCGFLCNVSLLSISTTRI*KE 81
           MVHGQE+SCW +P LEQ Y K+I+A S L   +      LCNV+L SISTTRI KE
Sbjct: 1   MVHGQEHSCWFVPFLEQGYWKIIQAPSNLEEFYTRRIWILCNVALFSISTTRIWKE 56


>XP_003629607.2 hypothetical protein MTR_8g081570 [Medicago truncatula] AET04083.2
           hypothetical protein MTR_8g081570 [Medicago truncatula]
          Length = 583

 Score = 53.1 bits (126), Expect(2) = 1e-09
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = -3

Query: 166 FSTVLGLLIAGFCAMSRCFPFPPPGYEKKPR 74
           F   L   I+GFCAMSRCFPFPPPGYEKK R
Sbjct: 11  FVPFLEQCISGFCAMSRCFPFPPPGYEKKTR 41



 Score = 39.3 bits (90), Expect(2) = 1e-09
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -2

Query: 248 MVHGQEYSCWLLPLLEQC 195
           MVHGQE+SCW +P LEQC
Sbjct: 1   MVHGQEHSCWFVPFLEQC 18


>XP_003601656.2 rhodanese/cell cycle control phosphatase superfamily protein
           [Medicago truncatula] AES71907.2 rhodanese/cell cycle
           control phosphatase superfamily protein [Medicago
           truncatula]
          Length = 1378

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 142 IAGFCAMSRCFPFPPPGYEKKPR 74
           I+GFCAMSRCFPFPPPGYEKK R
Sbjct: 23  ISGFCAMSRCFPFPPPGYEKKSR 45



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -2

Query: 248 MVHGQEYSCWLLPLLEQ 198
           MVHGQE SCW    LEQ
Sbjct: 1   MVHGQENSCWFDLFLEQ 17


>XP_013461206.1 rhodanese/cell cycle control phosphatase superfamily protein
           [Medicago truncatula] KEH35240.1 rhodanese/cell cycle
           control phosphatase superfamily protein [Medicago
           truncatula]
          Length = 1330

 Score = 52.8 bits (125), Expect(2) = 2e-06
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = -3

Query: 142 IAGFCAMSRCFPFPPPGYEKKPR 74
           I+GFCAMSRCFPFPPPGYEKK R
Sbjct: 23  ISGFCAMSRCFPFPPPGYEKKSR 45



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -2

Query: 248 MVHGQEYSCWLLPLLEQ 198
           MVHGQE SCW    LEQ
Sbjct: 1   MVHGQENSCWFDLFLEQ 17


>KVI08263.1 hypothetical protein Ccrd_013365 [Cynara cardunculus var. scolymus]
          Length = 705

 Score = 51.2 bits (121), Expect(2) = 8e-06
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -3

Query: 145 LIAGFCAMSRCFPFPPPGYEKKP 77
           L+ G CAMSRCFPFPPPGYEKKP
Sbjct: 86  LVRGACAMSRCFPFPPPGYEKKP 108



 Score = 28.1 bits (61), Expect(2) = 8e-06
 Identities = 9/15 (60%), Positives = 15/15 (100%)
 Frame = -2

Query: 275 VKAGNECKDMVHGQE 231
           +++GNEC+DMV+G+E
Sbjct: 68  IESGNECEDMVNGEE 82


Top