BLASTX nr result

ID: Panax24_contig00024647 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00024647
         (1210 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus]       65   2e-09
KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp...    65   2e-09
XP_016465134.1 PREDICTED: uncharacterized protein PB18E9.04c-lik...    59   6e-06
XP_009771334.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-lik...    59   6e-06

>XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus]
          Length = 455

 Score = 65.1 bits (157), Expect(2) = 2e-09
 Identities = 29/44 (65%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = +2

Query: 350 PTGFGESPP-TVNDTTSISTNLKPFIGCIILVTSIITGKFILDM 478
           P+ FGESPP ++N TT++ST ++PFIGC+ILVTSIITGKF+L++
Sbjct: 412 PSAFGESPPPSMNSTTAMSTRVQPFIGCVILVTSIITGKFVLNI 455



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 274 SVSPPTVLXXXXXXXXXXIGFGEIPPNWFRRKP 372
           S SPP             IGFG+IPP+ F   P
Sbjct: 387 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESP 419


>KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp. sativus]
          Length = 421

 Score = 65.1 bits (157), Expect(2) = 2e-09
 Identities = 29/44 (65%), Positives = 40/44 (90%), Gaps = 1/44 (2%)
 Frame = +2

Query: 350 PTGFGESPP-TVNDTTSISTNLKPFIGCIILVTSIITGKFILDM 478
           P+ FGESPP ++N TT++ST ++PFIGC+ILVTSIITGKF+L++
Sbjct: 378 PSAFGESPPPSMNSTTAMSTRVQPFIGCVILVTSIITGKFVLNI 421



 Score = 26.6 bits (57), Expect(2) = 2e-09
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +1

Query: 274 SVSPPTVLXXXXXXXXXXIGFGEIPPNWFRRKP 372
           S SPP             IGFG+IPP+ F   P
Sbjct: 353 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESP 385


>XP_016465134.1 PREDICTED: uncharacterized protein PB18E9.04c-like isoform X1
           [Nicotiana tabacum]
          Length = 372

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +2

Query: 347 LPTGFGES-PPTVNDTTSISTNLKPFIGCIILVTSIITGKFILDM 478
           +PTGFG++ PPTV  +TS+S++LKPFI CIIL TS++T K +LD+
Sbjct: 328 MPTGFGDTIPPTVTTSTSMSSSLKPFISCIILFTSLMTVKLVLDI 372


>XP_009771334.1 PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Nicotiana
           sylvestris] XP_016441275.1 PREDICTED: glucan
           endo-1,3-beta-glucosidase 3-like [Nicotiana tabacum]
          Length = 375

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 27/45 (60%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +2

Query: 347 LPTGFGES-PPTVNDTTSISTNLKPFIGCIILVTSIITGKFILDM 478
           +PTGFG++ PPTV  +TS+S++LKPFI CIIL TS++T K +LD+
Sbjct: 331 MPTGFGDTIPPTVTTSTSMSSSLKPFISCIILFTSLMTVKLVLDI 375


Top