BLASTX nr result
ID: Panax24_contig00024104
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00024104
(1355 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017226588.1 PREDICTED: probable RNA-dependent RNA polymerase ... 569 0.0
XP_016439423.1 PREDICTED: RNA-dependent RNA polymerase 1-like, p... 499 e-172
OAY29319.1 hypothetical protein MANES_15G135600 [Manihot esculenta] 522 e-172
XP_011075687.1 PREDICTED: probable RNA-dependent RNA polymerase ... 505 e-166
XP_012847562.1 PREDICTED: probable RNA-dependent RNA polymerase ... 503 e-165
CDP05596.1 unnamed protein product [Coffea canephora] 503 e-165
AAS78669.1 RdRp1m truncated protein [Nicotiana benthamiana] 481 e-164
KZV22426.1 RNA-dependent RNA polymerase 1-like [Dorcoceras hygro... 501 e-164
XP_009623376.1 PREDICTED: probable RNA-dependent RNA polymerase ... 499 e-163
CAA09697.1 RNA-directed RNA polymerase [Nicotiana tabacum] 499 e-163
XP_018856654.1 PREDICTED: RNA-dependent RNA polymerase 1 [Juglan... 498 e-163
XP_002284914.1 PREDICTED: probable RNA-dependent RNA polymerase ... 498 e-163
XP_015895367.1 PREDICTED: RNA-dependent RNA polymerase 1 [Ziziph... 498 e-163
GAV82938.1 RdRP domain-containing protein/RRM_6 domain-containin... 494 e-161
XP_002281315.1 PREDICTED: probable RNA-dependent RNA polymerase ... 493 e-161
XP_002311536.1 RNA-directed RNA Polymerase family protein [Popul... 493 e-161
XP_011024314.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 490 e-160
XP_011024307.1 PREDICTED: RNA-dependent RNA polymerase 1-like is... 490 e-160
OMO72379.1 RNA-dependent RNA polymerase, eukaryotic-type [Corcho... 489 e-159
ABV24845.1 RNA-dependent RNA polymerase [Nicotiana glutinosa] AC... 487 e-159
>XP_017226588.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Daucus carota
subsp. sativus] XP_017226589.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 [Daucus carota subsp.
sativus] KZM82714.1 hypothetical protein DCAR_030283
[Daucus carota subsp. sativus]
Length = 1105
Score = 569 bits (1466), Expect = 0.0
Identities = 277/417 (66%), Positives = 336/417 (80%), Gaps = 3/417 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG--AYAKVQFTTSNSAN 1101
MG+TIH+SGF L AE +KA LE+YTGK TVYA+EVK KK G YA+VQF TS SA
Sbjct: 1 MGRTIHVSGFLYLVPAEDLKAHLEKYTGKDTVYAVEVKASKKQGNAPYARVQFITSQSAE 60
Query: 1100 HIITL-ANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFW 924
+ I L A +R++YGSRYL+A+ +D+DI+ KP+ +TFVD ME ++LHFGCQ+S++KYSVFW
Sbjct: 61 YFIALSARQRIYYGSRYLRAYASDIDIIQKPEVRTFVDRMEDVSLHFGCQISEKKYSVFW 120
Query: 923 KKEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAP 744
KK DV VKFG GL K Y +LSH+SVDY LQLS EN+W+IELRHPR Q FI+IQLSGAP
Sbjct: 121 KKTDVKVKFGSGLHKFYFYLSHESVDYMLQLSSENIWKIELRHPRGQIKKFILIQLSGAP 180
Query: 743 RIFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSEIVVYK 564
RIFEK +DSI +YFKET +D WVR TDFTPS ALGQSSALCLEIP+G + PDF V+Y+
Sbjct: 181 RIFEKLKDSILNYFKETPEDFWVRATDFTPSLALGQSSALCLEIPHGRDTPDFGVSVIYQ 240
Query: 563 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 384
+N+ QF LESGSTFS N DLVP+ PR IQLPYNIYFKIC LVQNGY+PGPAID FY
Sbjct: 241 QNDGQFELESGSTFSNNLDLVPMPTLPRSIQLPYNIYFKICSLVQNGYIPGPAIDGRFYH 300
Query: 383 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 204
L+ GI+ F +H LEKL + K CCYDPVKW+ EQYIKYSTSR++ +P+I LD+GLV
Sbjct: 301 LM----GINEVFTKHTLEKLANKKECCYDPVKWFTEQYIKYSTSRRQWAAPSITLDTGLV 356
Query: 203 YVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPR 33
+VHR+QITP RV+ CGPE+NVSNRVLRK+ DI+NF+RVSF+DEEW+K++STDL R
Sbjct: 357 HVHRIQITPSRVFCCGPEINVSNRVLRKFSNDIENFLRVSFVDEEWNKLFSTDLYAR 413
>XP_016439423.1 PREDICTED: RNA-dependent RNA polymerase 1-like, partial [Nicotiana
tabacum]
Length = 437
Score = 499 bits (1286), Expect = e-172
Identities = 257/426 (60%), Positives = 326/426 (76%), Gaps = 4/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA++ L+YG YLKA+E DIV + +T+V++M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTDIV---QPRTYVEHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
DV++KFG GLKKIY FLSH S DYKLQLS+EN+WQ+ L P Q F+++QL GAPRI
Sbjct: 118 -DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV++P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFRNGVQLPNFSESFFYYKE 235
Query: 560 NESQFILESGSTFS--QNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFY 387
+ +QFIL++G TFS Q LVP++ P GI+LPY I FKI L+Q+G PG A++ NF+
Sbjct: 236 SMNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFF 295
Query: 386 RLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGL 207
+LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP+I LD GL
Sbjct: 296 QLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGL 354
Query: 206 VYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
VYV RV +TPC+VY+CGPEVNVSNRVLR Y +DI+NF+RVSF+DEEW+K++STDL PR +
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRAS 414
Query: 26 TVNGER 9
T NG R
Sbjct: 415 TGNGTR 420
>OAY29319.1 hypothetical protein MANES_15G135600 [Manihot esculenta]
Length = 1132
Score = 522 bits (1344), Expect = e-172
Identities = 255/435 (58%), Positives = 327/435 (75%), Gaps = 11/435 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
MGKT+ + GF S +A+ VK+FLE +TG+GT+YAI+++ KKGG YA VQF T A
Sbjct: 1 MGKTVQVYGFPSSVTADAVKSFLESHTGEGTIYAIKIRDTKKGGPRKYAIVQFMTVEDAE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
HII L +RLWYG+ YLKA DLDIVPKP+T F MEHITLHFG Q+SKE + V WK
Sbjct: 61 HIIFLTTKRLWYGTSYLKARPMDLDIVPKPRT--FFHSMEHITLHFGNQLSKENFYVLWK 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
DV V FG G++K++ +LSH V+YKL LS+E++WQIEL PR Q+ ++VIQL GAPR
Sbjct: 119 GTDVLVNFGSGMRKLHFYLSHHGVEYKLDLSYESIWQIELHRPRGQSVKYLVIQLYGAPR 178
Query: 740 IFEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 585
IFEK ED ++++FK+T+DDQW+RTTDFTPS +G SSALCLE+P+ +++P F
Sbjct: 179 IFEKDTRPSWNVYEDPLFNFFKDTSDDQWIRTTDFTPSCLIGHSSALCLELPSSLQVPKF 238
Query: 584 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 408
+ YKE E +F+L SGS FS+N DLVP++ P G +PY I F++ +LVQNG +PGP
Sbjct: 239 QDNFAYYKEIEGKFLLHSGSAFSRNLDLVPIVGPSAGFDIPYEILFQVNLLVQNGCLPGP 298
Query: 407 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 228
A+D FY+LVDP R + I IEHALEKL HLK CCY+P +W EQYIKY TS+ KSP+
Sbjct: 299 ALDAKFYKLVDPSR-VSIVCIEHALEKLLHLKECCYEPSRWLNEQYIKYLTSKNHTKSPS 357
Query: 227 IALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 48
I+LDSGLVYV RVQITPC+VY+CGPEVNVSNRVLR YP+ I NF+RVSF+DE+ +K++ST
Sbjct: 358 ISLDSGLVYVRRVQITPCKVYFCGPEVNVSNRVLRHYPEYISNFLRVSFVDEDLEKIHST 417
Query: 47 DLCPRIATVNGERRT 3
DL PR ++ N +RRT
Sbjct: 418 DLSPRSSSENEDRRT 432
>XP_011075687.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
XP_011075688.1 PREDICTED: probable RNA-dependent RNA
polymerase 1 [Sesamum indicum] XP_011075689.1 PREDICTED:
probable RNA-dependent RNA polymerase 1 [Sesamum indicum]
Length = 1115
Score = 505 bits (1300), Expect = e-166
Identities = 250/426 (58%), Positives = 320/426 (75%), Gaps = 2/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L +A+ VK FLE+ TG+GT+ A+EVK KKG AYAKVQFT S A
Sbjct: 1 MGKTIQVYGFPYLIAADVVKNFLEQQTGQGTIVALEVKPSKKGPRAYAKVQFTHSRYAEM 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
I LA+ RL+YG+ YL+ +E+D DIV P+T +V ME +TL+FGCQ S+EK+SV WK
Sbjct: 61 IQNLASTRLYYGTSYLRVWESDSDIVHNPRT--YVHEMEQVTLNFGCQTSREKFSVLWKV 118
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
V+VKFG G+KK++ L H SV+YKLQLS+EN+WQI L HP QT ++IQL GAPRI
Sbjct: 119 ASVSVKFGTGMKKMHFLLCHNSVEYKLQLSYENIWQIVLYHPHGQTAKLLLIQLFGAPRI 178
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
++K +SIYSYF ET DDQW+RTTDFTPS +GQ+S LCLE+P G+ +P+F + V Y +
Sbjct: 179 YKKVSESIYSYFSETQDDQWIRTTDFTPS-CIGQASGLCLELPYGMRLPNFQDHFVYYSK 237
Query: 560 NESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYRL 381
+E+ F LE G+ FS N DLVP+L PPRG +LPY I FK+C LVQ G +PGP +D F++L
Sbjct: 238 SENPFHLERGAPFSHNLDLVPILHPPRGFELPYRILFKVCSLVQTGCLPGPKLDARFFQL 297
Query: 380 VDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLVY 201
V+P+R I+ ++EHALEKL +LK CCYDP W EQY KY T++++ SP I+L GLVY
Sbjct: 298 VNPQR-INTKYVEHALEKLYYLKECCYDPTTWLMEQYEKYRTAKEQPTSPVISLGDGLVY 356
Query: 200 VHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIATV 21
VHRVQ+TP +VY+ GPEVNVSNRVLR Y IDNF+RVSF+DEEWDKMYSTDL PR+A+
Sbjct: 357 VHRVQVTPTKVYFSGPEVNVSNRVLRHYSDYIDNFLRVSFVDEEWDKMYSTDLSPRVASA 416
Query: 20 NGERRT 3
+ +T
Sbjct: 417 DENGKT 422
>XP_012847562.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Erythranthe
guttata] XP_012847563.1 PREDICTED: probable RNA-dependent
RNA polymerase 1 [Erythranthe guttata] EYU28878.1
hypothetical protein MIMGU_mgv1a000505mg [Erythranthe
guttata]
Length = 1110
Score = 503 bits (1296), Expect = e-165
Identities = 252/426 (59%), Positives = 319/426 (74%), Gaps = 2/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MG+TI + GF L +AE VK FLE YTG+GTV A+EVK K G AYA+VQFT A
Sbjct: 1 MGRTIQVFGFPYLVAAELVKKFLENYTGEGTVIALEVKTAKVGRRAYARVQFTNIRCAET 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA RL+YG+ YLKA+E+D+DIV P+T F ME++TL+FGCQ+S K+SV WK
Sbjct: 61 IIDLAKNRLYYGTSYLKAYESDIDIVQNPRT--FAHEMENVTLNFGCQISPHKFSVLWKG 118
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
E VTVKFG G+KK++ FL H SV+YK+QLS+EN+WQI L + Q+ +VIQL GAPRI
Sbjct: 119 ESVTVKFGTGMKKMHFFLRHNSVEYKMQLSYENIWQIVLYNSYGQSSKLLVIQLFGAPRI 178
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
++K S+YSYF T DDQWVRTTDFT S +GQSS+LCL++P G+ +P+F + + YKE
Sbjct: 179 YKKLSGSVYSYFMVTQDDQWVRTTDFTQSL-IGQSSSLCLQLPYGMRLPNFRDNFLYYKE 237
Query: 560 NESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYRL 381
+E+ F LE+G FS NSDLVP++ PP I+LPY + FK+C LVQ G +PGP +D +F+ L
Sbjct: 238 SETPFRLETGVPFSHNSDLVPIVRPPIDIKLPYTLLFKVCSLVQTGCLPGPKLDRSFFDL 297
Query: 380 VDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLVY 201
V+P + DI +IEHALEKL +LK CCY+P W +EQY +Y TS++ KSP I LD GLVY
Sbjct: 298 VNPAKH-DIRYIEHALEKLYYLKECCYNPAAWLKEQYERYRTSKEHPKSPAICLDDGLVY 356
Query: 200 VHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIATV 21
VHRVQ+TP RVY+ GPEVNVSNRVLR Y IDNF+RVSF+DEEWDKMYSTDL PR+A
Sbjct: 357 VHRVQVTPTRVYFSGPEVNVSNRVLRHYRDYIDNFLRVSFVDEEWDKMYSTDLSPRVAAG 416
Query: 20 NGERRT 3
+ +RT
Sbjct: 417 DENKRT 422
>CDP05596.1 unnamed protein product [Coffea canephora]
Length = 1112
Score = 503 bits (1296), Expect = e-165
Identities = 248/418 (59%), Positives = 320/418 (76%), Gaps = 2/418 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF S+ AE V FLE +TG+GTVYA+E+K+ K G AYAKVQFT SA +
Sbjct: 1 MGKTIQVFGFPSVVPAETVTKFLECFTGQGTVYALEIKQSKGGNRAYAKVQFTNDRSAEY 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
I+TLA +RL YGS YL+A+E D+D+VP+ ++F ME I LHFGCQVSK ++SV
Sbjct: 61 IMTLAKKRLNYGSSYLRAWEMDVDLVPR--ARSFEHNMEQIVLHFGCQVSKNRFSVLRNV 118
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
+V+V+FG G++K+Y L +S DYKL+LS+EN+WQI L H R F++IQL GAPR+
Sbjct: 119 PNVSVRFGIGMRKMYFILRFRSCDYKLELSYENIWQIVL-HRRSLAPKFLLIQLFGAPRV 177
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSEIVV-YKE 561
F+K E+S +SYFKET DDQWVRTTDFT S +GQSS +CLE+P G+++P+ + +KE
Sbjct: 178 FKKLEESTFSYFKETPDDQWVRTTDFTSS-CIGQSSGICLELPRGIQLPNLGDYFAWFKE 236
Query: 560 NESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYRL 381
++SQF LE+GS +S N L P+L PP+G+ LPY I FK+C LVQ G +PGP++D NF+RL
Sbjct: 237 SDSQFFLETGSPYSYNLVLAPILQPPQGLYLPYGILFKVCCLVQTGCLPGPSLDANFFRL 296
Query: 380 VDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLVY 201
VDP+R I I +IEHALE L LK CCY+PV+W +EQY KY RQ KSPT+ LD GLVY
Sbjct: 297 VDPQR-IKIRYIEHALENLYMLKECCYEPVQWLKEQYDKYDKLRQLPKSPTLTLDDGLVY 355
Query: 200 VHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
V RVQ+TPC+VY+CGPEVNVSNRVLR + +D+DNF+RVSF+DEEW+KM+STDL PRIA
Sbjct: 356 VRRVQVTPCKVYFCGPEVNVSNRVLRNFSEDLDNFLRVSFIDEEWNKMFSTDLSPRIA 413
>AAS78669.1 RdRp1m truncated protein [Nicotiana benthamiana]
Length = 479
Score = 481 bits (1237), Expect = e-164
Identities = 249/426 (58%), Positives = 320/426 (75%), Gaps = 4/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G ++A+VQF ++ SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRSFARVQFASNKSAEL 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA+ L+YG YLKA+E + DIV + +T+V +M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASMGLYYGPSYLKAWEMNTDIV---QPRTYVQHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
DV++KFG GLKKIY FLS+ S DYKLQLS+EN+WQ+ L P Q F+++QL GAPRI
Sbjct: 118 -DVSIKFGIGLKKIYFFLSYGSSDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLFGAPRI 176
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
+++ E+S YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NG+ +P+F E YKE
Sbjct: 177 YKRLEESCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFHNGIRLPNFRESFFYYKE 235
Query: 560 NESQFILESGSTFS--QNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFY 387
+ +Q IL +G TFS Q LVP++ P G+ LPY I FKI L+Q+G PG A++ NF+
Sbjct: 236 SGNQVILRTGFTFSFSQKLALVPIVHLPNGVDLPYKILFKISSLIQHGCFPGVALNFNFF 295
Query: 386 RLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGL 207
+LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP+I LD GL
Sbjct: 296 QLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDGL 354
Query: 206 VYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
VYV RV +TPC+VY+ GPEVNVSNRVLR Y +DIDNF+RVSF+DEEW+K++STDL PR +
Sbjct: 355 VYVRRVVVTPCKVYFSGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRAS 414
Query: 26 TVNGER 9
T NG R
Sbjct: 415 TGNGMR 420
>KZV22426.1 RNA-dependent RNA polymerase 1-like [Dorcoceras hygrometricum]
Length = 1110
Score = 501 bits (1290), Expect = e-164
Identities = 252/427 (59%), Positives = 322/427 (75%), Gaps = 3/427 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA-YAKVQFTTSNSANH 1098
MGKT+++SGF L +AE +K + E YTG+ TV A+E+K K+G YAKVQF + A
Sbjct: 1 MGKTVYVSGFPHLIAAELIKEYFEVYTGRETVDAVEMKPSKQGPRPYAKVQFVNHSCAQQ 60
Query: 1097 IITLAN-RRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
I+ LAN RRL+YG YLKA E D+DI+P+ K + ME +TL+FGCQ+S++K++V WK
Sbjct: 61 IVALANSRRLYYGRSYLKAREMDVDIIPR--VKAYSHEMEEVTLNFGCQISRDKFAVLWK 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
V+VKFG G+KK+Y LS +YKLQLS+EN+WQI L P DQT F+VIQL GAPR
Sbjct: 119 GSKVSVKFGTGMKKMYFHLSFNLDEYKLQLSYENIWQIVLYCPPDQTARFLVIQLFGAPR 178
Query: 740 IFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYK 564
I++K +DSIYS++KET+DDQWVRTTDFT S +GQSS +CL++P G+ +P+F + V YK
Sbjct: 179 IYKKLKDSIYSFYKETSDDQWVRTTDFTSS-CIGQSSGICLQLPYGMRLPNFHDNFVYYK 237
Query: 563 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 384
+ES F L+ S FS N LVP+L PP G +LPY I FKIC LVQ G +PGP ID +FYR
Sbjct: 238 VSESPFYLQGDSPFSHNLVLVPILNPPSGYELPYKILFKICGLVQTGCLPGPKIDASFYR 297
Query: 383 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 204
LV+P+R I+I +IEHAL+KL +LK CCYDPV W EQY KY++S++ K+P+I LD GLV
Sbjct: 298 LVNPQR-INITYIEHALDKLYYLKECCYDPVTWLHEQYKKYTSSQEIPKAPSIRLDDGLV 356
Query: 203 YVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIAT 24
YVHRVQ+TP +VY+ GPEVNVSNRVLR Y DIDNF+RVSF+DEEWDKMYSTDL PR+ +
Sbjct: 357 YVHRVQVTPTKVYFAGPEVNVSNRVLRHYQDDIDNFIRVSFVDEEWDKMYSTDLSPRVVS 416
Query: 23 VNGERRT 3
RRT
Sbjct: 417 GGENRRT 423
>XP_009623376.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] XP_009623378.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis] XP_018632650.1 PREDICTED: probable
RNA-dependent RNA polymerase 1 [Nicotiana
tomentosiformis]
Length = 1116
Score = 499 bits (1285), Expect = e-163
Identities = 256/426 (60%), Positives = 326/426 (76%), Gaps = 4/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA++ L+YG YLKA+E DIV + +T+V++M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTDIV---QPRTYVEHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
DV++KFG GLKKIY FLSH S DYKLQLS+EN+WQ+ L P Q F+++QL GAPRI
Sbjct: 118 -DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV++P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFRNGVQLPNFSESFFYYKE 235
Query: 560 NESQFILESGSTFS--QNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFY 387
+ +QFIL++G TFS Q LVP++ P G++LPY I FKI L+Q+G PG A++ NF+
Sbjct: 236 SMNQFILQTGFTFSFSQKLALVPIVHLPEGVELPYKILFKISSLIQHGCFPGLALNFNFF 295
Query: 386 RLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGL 207
+LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP+I LD GL
Sbjct: 296 QLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPSITLDDGL 354
Query: 206 VYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
VYV RV +TPC+VY+CGPEVNVSNRVLR Y +DI+NF+RVSF+DEEW+K++STDL PR +
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRAS 414
Query: 26 TVNGER 9
T NG R
Sbjct: 415 TGNGTR 420
>CAA09697.1 RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 499 bits (1284), Expect = e-163
Identities = 257/426 (60%), Positives = 325/426 (76%), Gaps = 4/426 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKKFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEF 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA++ L+YG YLKA+E DIV + +T+V++M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTDIV---QPRTYVEHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
DV++KFG GLKKIY FLSH S DYKLQLS+EN+WQ+ L P Q F+++QL GAPRI
Sbjct: 118 -DVSIKFGIGLKKIYFFLSHASADYKLQLSYENIWQVVLHRPYGQNAQFLLLQLFGAPRI 176
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV++P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFRNGVQLPNFSESFFYYKE 235
Query: 560 NESQFILESGSTFS--QNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFY 387
+ +QFIL++G TFS Q LVP++ P GI+LPY I FKI L+Q+G PG A++ NF+
Sbjct: 236 SMNQFILQTGFTFSFSQKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNFF 295
Query: 386 RLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGL 207
+LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP I LD GL
Sbjct: 296 QLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKGRQLPKSPPITLDDGL 354
Query: 206 VYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
VYV RV +TPC+VY+CGPEVNVSNRVLR Y +DI+NF+RVSF+DEEW+K++STDL PR +
Sbjct: 355 VYVRRVVVTPCKVYFCGPEVNVSNRVLRNYSEDINNFLRVSFVDEEWEKIHSTDLLPRAS 414
Query: 26 TVNGER 9
T NG R
Sbjct: 415 TGNGTR 420
>XP_018856654.1 PREDICTED: RNA-dependent RNA polymerase 1 [Juglans regia]
XP_018856655.1 PREDICTED: RNA-dependent RNA polymerase 1
[Juglans regia] XP_018856657.1 PREDICTED: RNA-dependent
RNA polymerase 1 [Juglans regia]
Length = 1131
Score = 498 bits (1283), Expect = e-163
Identities = 252/435 (57%), Positives = 325/435 (74%), Gaps = 11/435 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG--AYAKVQFTTSNSAN 1101
MGKTIHLSGF S +A++V+ FLER+TG+GTVYAI+++ + GG A A VQFT++ A
Sbjct: 1 MGKTIHLSGFPSSVTAQEVQEFLERHTGEGTVYAIKIRPNRSGGQRANATVQFTSNRHAE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II+LAN RLWYG YLKA+E + DIVPKP+T F+ +E+I LHFGCQ+S EK+S+ W+
Sbjct: 61 SIISLANVRLWYGRSYLKAWERERDIVPKPRT--FLHSLENIILHFGCQISNEKFSILWR 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V V FG GL+K LS SV+YKL+ S+EN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 AVNVCVNFGTGLRKFQFVLSLNSVEYKLEFSYENIWQIELHRPRGQTAKYLLIQLFGAPR 178
Query: 740 IFEK---PEDSIY-----SYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 585
I+EK P D++Y ++FK+ DDQWVR DFTPS +GQSS+LCLE+P+G ++PDF
Sbjct: 179 IYEKDSQPSDNLYENPLFNFFKDIPDDQWVRGVDFTPSCCIGQSSSLCLELPHGHQLPDF 238
Query: 584 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 408
E YKE+E ++ILESGSTFS N DLVP++ P G+ LPY I FKI LVQNG + GP
Sbjct: 239 RENFAYYKESEGRYILESGSTFSCNLDLVPIVGPSPGVDLPYEILFKINSLVQNGCLAGP 298
Query: 407 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 228
+D FYRLV+PR I+I IEHAL+KL H++ CCYDP+ W EQY KY +R KSP
Sbjct: 299 TLDVRFYRLVNPRT-INIDCIEHALDKLSHIQECCYDPLMWLNEQYRKYLKARHPPKSPA 357
Query: 227 IALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 48
I+ DSGL YV RVQITP +VY+CGPE+NVSNRVLR + DIDNF+RVSF+DE+ DKM+ST
Sbjct: 358 IS-DSGLCYVRRVQITPSKVYFCGPEINVSNRVLRYFRDDIDNFLRVSFVDEDLDKMFST 416
Query: 47 DLCPRIATVNGERRT 3
DL R+++ N +R+T
Sbjct: 417 DLSSRVSSANEDRKT 431
>XP_002284914.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 498 bits (1282), Expect = e-163
Identities = 245/419 (58%), Positives = 316/419 (75%), Gaps = 3/419 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
M KTI + GF S+ SA+++K FLE+YTG+GT+ A+E+K+ + G + +AKVQFT+ A
Sbjct: 1 MSKTIQVYGFPSIVSADEIKEFLEKYTGEGTIEALEIKQPRSGASMTHAKVQFTSFELAE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
IITL +++WYG YLKA E DLDI+PKP+ F+ M+ ITLHFGCQ+S E++ V WK
Sbjct: 61 FIITLCKKKVWYGRNYLKAREMDLDIIPKPRA--FLHSMDRITLHFGCQMSDERFCVLWK 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V+VKFG GL+K Y FLSH S +YKL+LS+EN+WQI+L+HPR Q F++IQL GAP+
Sbjct: 119 AINVSVKFGSGLRKFYFFLSHGSEEYKLELSYENIWQIQLQHPRGQITKFLLIQLLGAPQ 178
Query: 740 IFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYK 564
I+EK + YFKE DDQWVR DFTPS +GQS ALCLE+P G ++P+F E YK
Sbjct: 179 IYEKDVPVLSYYFKEAPDDQWVREIDFTPSCFIGQSFALCLELPYGSQLPNFRENFAYYK 238
Query: 563 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 384
EN+ +FILESGS++S N LVP+L PP+G LP+ I FKI LVQNG + GP +D +F+R
Sbjct: 239 ENDGKFILESGSSYSHNLHLVPILGPPQGSSLPFQILFKINTLVQNGCLSGPTLDTSFFR 298
Query: 383 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 204
LVDP R I+FIEHALEKL HLK CCY+PV+W EQY Y + SP I+LD+GLV
Sbjct: 299 LVDPER-FPISFIEHALEKLYHLKECCYEPVRWLSEQYRTY-VKKPVAGSPAISLDTGLV 356
Query: 203 YVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIA 27
YV RVQITPC+VY+CGPEVNVSNRVLR YP+DIDNF+RVSFLDE +K++ST + PR++
Sbjct: 357 YVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENLEKIHSTVISPRMS 415
>XP_015895367.1 PREDICTED: RNA-dependent RNA polymerase 1 [Ziziphus jujuba]
Length = 1126
Score = 498 bits (1281), Expect = e-163
Identities = 252/424 (59%), Positives = 318/424 (75%), Gaps = 10/424 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGAY-AKVQFTTSNSANH 1098
MG+TI +SGF S SAE VK FLE TG+GTVYAI+++K K GG Y A VQFT++ A
Sbjct: 1 MGRTIQVSGFPSSVSAELVKKFLENLTGEGTVYAIKLRKFKNGGRYYAIVQFTSTRDAEF 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II+LA RLWYG+ YL A D DIV KP+T ++ +E+ITLHFGCQ+SKEK+SV WK+
Sbjct: 61 IISLAGARLWYGTSYLTARSMDTDIVAKPRT--YLHSLENITLHFGCQISKEKFSVLWKR 118
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
E+V+V FG GL++++ +Q V+YKLQLS+EN+WQIEL P QT +++IQL GAPRI
Sbjct: 119 ENVSVDFGIGLRRLHFHFMYQYVEYKLQLSYENIWQIELHRPLGQTVKYLLIQLYGAPRI 178
Query: 737 FEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFS 582
+EK ED I+++FK+T DDQWVR TDFTPS +GQSSALCLE+P+G +P+F
Sbjct: 179 YEKDVPSSGDVYEDPIFNFFKDTPDDQWVRATDFTPSCRIGQSSALCLELPSGPRLPNFK 238
Query: 581 E-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPA 405
E YKE+E +F LE+G FS N LVP++ PP + LPY+I FKI L+Q G + GP+
Sbjct: 239 ENFAYYKESEGRFSLETGFPFSCNLYLVPIVGPPLDVHLPYDIIFKINALLQQGCLTGPS 298
Query: 404 IDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTI 225
+D FYRLVDPRR I++A IEHAL+KL +LK CCY+P W EQY KY S++ KSP I
Sbjct: 299 LDAAFYRLVDPRR-INVACIEHALDKLYNLKECCYEPSTWLNEQYRKYFKSKRPPKSPMI 357
Query: 224 ALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTD 45
+LD+GLVYV RVQITPC+VY+ GPE+NVSNRVLR YP IDNF+RVSF+DEE DKMYSTD
Sbjct: 358 SLDAGLVYVRRVQITPCKVYFFGPEINVSNRVLRHYPNHIDNFLRVSFVDEELDKMYSTD 417
Query: 44 LCPR 33
L PR
Sbjct: 418 LSPR 421
>GAV82938.1 RdRP domain-containing protein/RRM_6 domain-containing protein
[Cephalotus follicularis]
Length = 1134
Score = 494 bits (1273), Expect = e-161
Identities = 249/438 (56%), Positives = 318/438 (72%), Gaps = 14/438 (3%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG--AYAKVQFTTSNSAN 1101
MGKTI +SGF S SAE V FLE YTG+ ++YA +++ K GG YA VQFTT +AN
Sbjct: 1 MGKTIQVSGFPSHMSAEAVNDFLESYTGQKSIYASKIRCPKNGGRRGYAIVQFTTIEAAN 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II L N+ LWYG+ YLKA E LDIVPKP+ F ME ITLHFGCQ+S + + V +
Sbjct: 61 RIICLCNQGLWYGTSYLKAREMKLDIVPKPRD--FGPTMEQITLHFGCQISSDNFLVLYN 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+ +VTV FG ++K+ FL ++YKL+LS+EN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 RFNVTVNFGIRVRKLQFFLCLHQLEYKLELSYENIWQIELHCPRGQTEKYLMIQLVGAPR 178
Query: 740 IFEKP-----------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEI 594
IF K ED + +YF + DDQWVRTTDFTPS +GQSSALCLE+P G+++
Sbjct: 179 IFTKDVRSSGMAYEIFEDPLRNYFMDFPDDQWVRTTDFTPSCCIGQSSALCLELPVGLKL 238
Query: 593 PDFSE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYV 417
P F E YKE E +++L+ G +S++ DLVP++ PP GI LPY I FKI ILVQNG +
Sbjct: 239 PSFEENFAYYKETEGRYVLDIGLPYSRSLDLVPIVGPPSGIDLPYEILFKINILVQNGCL 298
Query: 416 PGPAIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLK 237
GP +D +FYRLVDPRR +DIA IEHALEKLCHLK CCY+P +W +QY KY +SR+ +
Sbjct: 299 AGPTLDVSFYRLVDPRR-MDIACIEHALEKLCHLKECCYEPSRWLSDQYRKYLSSRKLPR 357
Query: 236 SPTIALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKM 57
SP I+LD GLVYV RVQITPC++++CGPEVNVSNR+LRKY +DIDNF+RVSF+DE+W+K+
Sbjct: 358 SPAISLDDGLVYVRRVQITPCKIFFCGPEVNVSNRILRKYREDIDNFLRVSFVDEDWEKI 417
Query: 56 YSTDLCPRIATVNGERRT 3
S DL P ++ N RRT
Sbjct: 418 RSADLSPHTSSTNEIRRT 435
>XP_002281315.1 PREDICTED: probable RNA-dependent RNA polymerase 1 [Vitis vinifera]
XP_010650995.1 PREDICTED: probable RNA-dependent RNA
polymerase 1 [Vitis vinifera]
Length = 1109
Score = 493 bits (1270), Expect = e-161
Identities = 255/427 (59%), Positives = 327/427 (76%), Gaps = 3/427 (0%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
MGKTI + G S SA ++K FLE+YTG+GT+ A+E+K+ K G + +AKVQFT+ A
Sbjct: 1 MGKTIQVYGVPSNVSANEIKEFLEKYTGEGTIEALEIKQPKSGVSMTHAKVQFTSLRLAE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II+LA ++LWYG YLKA E DLDI+PKP+T F+ M+ ITLHFG Q+S E++ V WK
Sbjct: 61 LIISLA-KQLWYGGNYLKAREMDLDIIPKPRT--FLHSMDRITLHFGYQMSNERFCVLWK 117
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V+VKFGFGL+K Y FLSH S +YKL+LS EN+WQI+LR PR Q F++IQL AP+
Sbjct: 118 AINVSVKFGFGLRKFYFFLSHGSEEYKLELSCENIWQIQLREPRGQNTKFLLIQLLDAPQ 177
Query: 740 IFEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYK 564
I+EK + S SYFKET DDQWVR DFTPS ++GQSSALCLE+P+G ++P+F E YK
Sbjct: 178 IYEK-DVSALSYFKETPDDQWVREIDFTPSCSIGQSSALCLELPHGSQLPNFCENFARYK 236
Query: 563 ENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNFYR 384
EN+ +FILESG++FS N LVP++ PP+G LP+ I FKI LVQNG + GP +D NF+R
Sbjct: 237 ENDRKFILESGASFSGNLHLVPIVGPPQGSNLPFKILFKINTLVQNGCLSGPTLDTNFFR 296
Query: 383 LVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSGLV 204
VDP+R I+I+FIEHALEKL +L+ CCY+PV+W EQY Y S+Q SP I+LD+GLV
Sbjct: 297 WVDPQR-INISFIEHALEKLYYLEECCYEPVRWLHEQYRTY-ISKQVAGSPAISLDTGLV 354
Query: 203 YVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRIAT 24
YV RVQITPC+VY+CGPEVNVSNRVLR YP+DIDNF+RVSFLDE +K++ST + PR++
Sbjct: 355 YVRRVQITPCKVYFCGPEVNVSNRVLRNYPEDIDNFLRVSFLDENSEKIHSTVISPRMS- 413
Query: 23 VNGERRT 3
N RRT
Sbjct: 414 -NEGRRT 419
>XP_002311536.1 RNA-directed RNA Polymerase family protein [Populus trichocarpa]
EEE88903.1 RNA-directed RNA Polymerase family protein
[Populus trichocarpa]
Length = 1133
Score = 493 bits (1270), Expect = e-161
Identities = 242/435 (55%), Positives = 323/435 (74%), Gaps = 11/435 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
M KT+ +SGF S +A V+ FLE +TG GTV A+++++ + GGA YA VQFTT+ +A
Sbjct: 1 MSKTVKVSGFPSSTTAGAVQVFLESHTGGGTVEALKIREIRTGGARKYAIVQFTTTRAAE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II+LAN RLWYG YL A D DI+P+P++ F+ ME +TLHFG Q SKEK+S W
Sbjct: 61 QIISLANPRLWYGHSYLNARPMDRDIIPQPRS--FLHTMESVTLHFGYQTSKEKFSAVWS 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V+V FG G++K++ FLSH +YKL L FEN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178
Query: 740 IFEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 585
I+E+ ED + +YF++ D+QWVRTTDFTPS +G SS+LCLE+PN +++P+F
Sbjct: 179 IYERDVPSSSNVFEDPLLNYFRDVPDEQWVRTTDFTPSCGIGHSSSLCLELPNHLQLPNF 238
Query: 584 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 408
+E YKENE F+LESG TFS+N DLVP++ P G+ LPYNI F++ +LVQNG + G
Sbjct: 239 NENFFYYKENEGTFVLESGLTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298
Query: 407 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 228
+DD FYRLVDP R + + IE+ALEKL HLK CCY+P KW+ EQY KY TS +SP
Sbjct: 299 MLDDIFYRLVDPNR-MPVRCIEYALEKLYHLKECCYEPSKWFNEQYKKYLTSGNPPRSPV 357
Query: 227 IALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 48
++LD+GLVYV++VQITPC+V++CGPEVNVSNRVLR+Y +DIDNF+RVSF+DEE +K++ST
Sbjct: 358 LSLDAGLVYVYKVQITPCKVFFCGPEVNVSNRVLRQYREDIDNFLRVSFVDEELEKIHST 417
Query: 47 DLCPRIATVNGERRT 3
D+ PR ++ N RRT
Sbjct: 418 DVSPRTSSRNELRRT 432
>XP_011024314.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X2 [Populus
euphratica]
Length = 1132
Score = 490 bits (1262), Expect = e-160
Identities = 239/435 (54%), Positives = 322/435 (74%), Gaps = 11/435 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
M KT+ +SGF S +A V+ FLE YTG GTV A+++++ + GA YA VQFTT+ +
Sbjct: 1 MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGARKYAIVQFTTTRATE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II+LAN+RLWYG YL A D DI+P+P++ ME +TLHFG Q SKEK+S W
Sbjct: 61 QIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHT--MESVTLHFGYQTSKEKFSAVWS 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V+V FG G++K++ FLSH +YKL L FEN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178
Query: 740 IFEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 585
I+E+ ED + +YF++ D+QWVRTTDFTPS ++G SS+LCLE+P+ +++P+F
Sbjct: 179 IYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNF 238
Query: 584 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 408
+E YKENE F+LESGSTFS+N DLVP++ P G+ LPYNI F++ +LVQNG + G
Sbjct: 239 NENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298
Query: 407 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 228
+DD FYRLVDP R + + IEHALEKL HLK CCY+P KW+ EQY KY TS +SP
Sbjct: 299 MLDDIFYRLVDPNR-MPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPV 357
Query: 227 IALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 48
++LD+GLVYV++VQITPC+V++CGPEVN+SNRVLR+Y ++IDNF+RVSF+DEE +K++ST
Sbjct: 358 LSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHST 417
Query: 47 DLCPRIATVNGERRT 3
D+ PR ++ N RRT
Sbjct: 418 DVSPRTSSRNELRRT 432
>XP_011024307.1 PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Populus
euphratica]
Length = 1132
Score = 490 bits (1262), Expect = e-160
Identities = 239/435 (54%), Positives = 322/435 (74%), Gaps = 11/435 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGGA--YAKVQFTTSNSAN 1101
M KT+ +SGF S +A V+ FLE YTG GTV A+++++ + GA YA VQFTT+ +
Sbjct: 1 MSKTVQVSGFPSSATAGAVQVFLESYTGGGTVEALKIRETRTRGARKYAIVQFTTTRATE 60
Query: 1100 HIITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWK 921
II+LAN+RLWYG YL A D DI+P+P++ ME +TLHFG Q SKEK+S W
Sbjct: 61 QIISLANQRLWYGRSYLNARPMDRDIIPQPRSSLHT--MESVTLHFGYQTSKEKFSAVWS 118
Query: 920 KEDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPR 741
+V+V FG G++K++ FLSH +YKL L FEN+WQIEL PR QT +++IQL GAPR
Sbjct: 119 GNNVSVNFGLGMRKLHFFLSHNLAEYKLNLLFENIWQIELHRPRGQTVKYLLIQLYGAPR 178
Query: 740 IFEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDF 585
I+E+ ED + +YF++ D+QWVRTTDFTPS ++G SS+LCLE+P+ +++P+F
Sbjct: 179 IYEREVPSSLNLFEDPLLNYFRDIPDEQWVRTTDFTPSCSIGHSSSLCLELPSHLQLPNF 238
Query: 584 SE-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGP 408
+E YKENE F+LESGSTFS+N DLVP++ P G+ LPYNI F++ +LVQNG + G
Sbjct: 239 NENFFYYKENEGTFVLESGSTFSRNPDLVPIVGPSSGVNLPYNILFRVNLLVQNGCLAGS 298
Query: 407 AIDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPT 228
+DD FYRLVDP R + + IEHALEKL HLK CCY+P KW+ EQY KY TS +SP
Sbjct: 299 MLDDIFYRLVDPNR-MPVRCIEHALEKLYHLKECCYEPSKWFNEQYRKYLTSGNPPRSPV 357
Query: 227 IALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYST 48
++LD+GLVYV++VQITPC+V++CGPEVN+SNRVLR+Y ++IDNF+RVSF+DEE +K++ST
Sbjct: 358 LSLDAGLVYVYKVQITPCKVFFCGPEVNISNRVLRQYLEEIDNFLRVSFVDEELEKIHST 417
Query: 47 DLCPRIATVNGERRT 3
D+ PR ++ N RRT
Sbjct: 418 DVSPRTSSRNELRRT 432
>OMO72379.1 RNA-dependent RNA polymerase, eukaryotic-type [Corchorus olitorius]
Length = 1108
Score = 489 bits (1258), Expect = e-159
Identities = 243/424 (57%), Positives = 314/424 (74%), Gaps = 10/424 (2%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI +SGF S +AE VK FLE YTG+GTVYA+++++ KKGG AYA VQFT + A
Sbjct: 1 MGKTIQVSGFLSNVTAENVKTFLESYTGQGTVYALKLRQPKKGGRAYAIVQFTRTTDAEL 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LAN+RL+YGS YLKA E + DIVPKP+T F+ MEH+ +HFGCQVS EK W++
Sbjct: 61 IIKLANQRLYYGSSYLKAREMESDIVPKPRT--FLHTMEHVKVHFGCQVSNEKIYALWEE 118
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
D TV FG ++K+ LSH V+YKL+LS+EN+WQIELR PRD+T +++IQL G+PRI
Sbjct: 119 VDFTVNFGMAMRKLQFLLSHHPVEYKLELSYENIWQIELRRPRDRTSKYLLIQLFGSPRI 178
Query: 737 FEKP--------EDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFS 582
+EK + +++YF DDQWVRTTDFT S +GQSS LCLE+P +++P+F
Sbjct: 179 YEKDVRPSGNVFDSPLFNYFMNVPDDQWVRTTDFTRSCYIGQSSVLCLELPRDLQLPNFR 238
Query: 581 E-IVVYKENESQFILESGSTFSQNSDLVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPA 405
E YKE+E + + E+GS++S N LVPV+ PP G++LP+ I FK+ LVQNG +PGPA
Sbjct: 239 ENFAYYKESEGRLVFETGSSYSHNLSLVPVVGPPLGVKLPFEILFKVNWLVQNGCIPGPA 298
Query: 404 IDDNFYRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTI 225
+D NF+R+VDP R I +IEHALEKL L+ CCY+P KW EQY Y SR+ L+SP I
Sbjct: 299 LDANFFRMVDPHR-IQRDYIEHALEKLYFLRECCYEPSKWLLEQYRNYIASRKILRSPAI 357
Query: 224 ALDSGLVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTD 45
+LD GLVYV RVQITP RVY+ GPEVNVSNRVLR +P DIDNF+R+SF+DEE +K++ST+
Sbjct: 358 SLDDGLVYVRRVQITPSRVYFGGPEVNVSNRVLRHFPNDIDNFLRISFVDEELEKIHSTE 417
Query: 44 LCPR 33
L R
Sbjct: 418 LLTR 421
>ABV24845.1 RNA-dependent RNA polymerase [Nicotiana glutinosa] ACI46982.1
RNA-dependent RNA polymerase [Nicotiana glutinosa]
Length = 1117
Score = 487 bits (1254), Expect = e-159
Identities = 254/427 (59%), Positives = 322/427 (75%), Gaps = 5/427 (1%)
Frame = -1
Query: 1274 MGKTIHLSGFCSLESAEKVKAFLERYTGKGTVYAIEVKKCKKGG-AYAKVQFTTSNSANH 1098
MGKTI + GF L SAE VK FLE +TG GTVYA+EVK+ K G A+AKVQF + SA
Sbjct: 1 MGKTIQVFGFPYLLSAEAVKTFLENHTGNGTVYALEVKQSKGGRRAFAKVQFANNKSAEI 60
Query: 1097 IITLANRRLWYGSRYLKAFENDLDIVPKPKTKTFVDYMEHITLHFGCQVSKEKYSVFWKK 918
II LA++ L+YG YLKA+E IV + +T+V +M+ +TL+FGCQ+S +K++V K
Sbjct: 61 IIDLASKGLYYGPSYLKAWEMKTYIV---QPRTYVQHMDGVTLNFGCQISDKKFAVLGSK 117
Query: 917 EDVTVKFGFGLKKIYVFLSHQSVDYKLQLSFENMWQIELRHPRDQTGAFIVIQLSGAPRI 738
V++KFG GLKKIY FLS+ S DYKLQLS+EN+WQ+ L P Q F+++QLSGAPRI
Sbjct: 118 V-VSIKFGIGLKKIYFFLSYGSTDYKLQLSYENIWQVVLHRPYGQKAQFLLLQLSGAPRI 176
Query: 737 FEKPEDSIYSYFKETADDQWVRTTDFTPSFALGQSSALCLEIPNGVEIPDFSE-IVVYKE 561
+++ EDS YS+FKET DDQWVRTTDFTPS+ +G SS+LCLE NGV +P+FSE YKE
Sbjct: 177 YKRLEDSCYSFFKETPDDQWVRTTDFTPSW-IGLSSSLCLEFHNGVRLPNFSESFFYYKE 235
Query: 560 NESQFILESGSTFSQNSD---LVPVLAPPRGIQLPYNIYFKICILVQNGYVPGPAIDDNF 390
+ +Q IL++G TFS + LVP++ P GI+LPY I FKI L+Q+G PG A++ NF
Sbjct: 236 SANQVILQTGFTFSFSQKKLALVPIVHLPEGIELPYKILFKISSLIQHGCFPGLALNFNF 295
Query: 389 YRLVDPRRGIDIAFIEHALEKLCHLKGCCYDPVKWYREQYIKYSTSRQRLKSPTIALDSG 210
++LVDPRR +IA IEHALEKL +LK CCYDPV+W EQY +Y RQ KSP+I LD G
Sbjct: 296 FQLVDPRRR-NIACIEHALEKLYYLKECCYDPVRWLTEQYDEYLKRRQLPKSPSITLDDG 354
Query: 209 LVYVHRVQITPCRVYYCGPEVNVSNRVLRKYPQDIDNFVRVSFLDEEWDKMYSTDLCPRI 30
LVYV RV +TPC+VY+CGPEVNVSNRVLR Y +DIDNF+RVSF+DEEW+K++STDL PR
Sbjct: 355 LVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKIHSTDLLPRA 414
Query: 29 ATVNGER 9
+T NG R
Sbjct: 415 STGNGVR 421