BLASTX nr result

ID: Panax24_contig00023939 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00023939
         (1186 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017223562.1 PREDICTED: uncharacterized protein At1g04910-like...    78   7e-12
XP_017252935.1 PREDICTED: uncharacterized protein At1g04910-like...    65   9e-08

>XP_017223562.1 PREDICTED: uncharacterized protein At1g04910-like [Daucus carota
           subsp. sativus] KZM83793.1 hypothetical protein
           DCAR_028785 [Daucus carota subsp. sativus]
          Length = 613

 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 47/121 (38%), Positives = 66/121 (54%)
 Frame = +3

Query: 369 GDSVFVAESLVWGIKDLVLGFYKFMNCLKLGKNMGRKIIGVLXXXXXXXXXXXXXXXLGN 548
           G SV V E ++  ++D++LGF K  + LK  KNMGR+I+G L               +GN
Sbjct: 58  GGSVPVPEKVMLLVEDVMLGFGKLGSTLKSRKNMGRRILGFLIIMVVLSMFMKFSYLVGN 117

Query: 549 HYEEDENGGKNGRRLNALFVLHSWANVNHNSAVXXXXXXXXXXXXXXGDSMPKRVLEKFP 728
           HY  +   GK+ RRLN LF+L++W+   H S +               +SMPKRVLEK+P
Sbjct: 118 HYNLEMINGKH-RRLNGLFILNTWSKPQHQSLLMLAAERDEEEL----NSMPKRVLEKYP 172

Query: 729 V 731
           V
Sbjct: 173 V 173


>XP_017252935.1 PREDICTED: uncharacterized protein At1g04910-like [Daucus carota
           subsp. sativus] KZM95496.1 hypothetical protein
           DCAR_018738 [Daucus carota subsp. sativus]
          Length = 599

 Score = 65.1 bits (157), Expect = 9e-08
 Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
 Frame = +3

Query: 369 GDSVFVAESLVWGIKDLVLGFYKFMNCLKLGKNMGRKIIGVLXXXXXXXXXXXXXXXLGN 548
           G  + + ES VW ++D V    K +N  K  KN GR+I+G L               L +
Sbjct: 48  GTCLVMPESWVWRVEDYVAELTKGVNSWKSRKNTGRRIVGGL-----MVTMMVFMMFLKS 102

Query: 549 HYEEDE--NGGKNGRRLNALFVLHSWANVNHNSAVXXXXXXXXXXXXXXGDSMPKRVLEK 722
            Y + E  +GGK+ RRLN LF + +W+N +H S V                SMPKRVLEK
Sbjct: 103 SYNDVEMISGGKHNRRLNGLFTMQTWSN-HHQSVVLSEEIKTSVV-----SSMPKRVLEK 156

Query: 723 FPV 731
           +PV
Sbjct: 157 YPV 159


Top