BLASTX nr result

ID: Panax24_contig00023507 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00023507
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KZN11975.1 hypothetical protein DCAR_004631 [Daucus carota subsp...    54   2e-14
XP_017258777.1 PREDICTED: uncharacterized protein LOC108227876 [...    54   2e-14
XP_017228215.1 PREDICTED: uncharacterized protein LOC108192435 [...    45   8e-08
CDP12031.1 unnamed protein product [Coffea canephora]                  47   8e-06

>KZN11975.1 hypothetical protein DCAR_004631 [Daucus carota subsp. sativus]
          Length = 816

 Score = 54.3 bits (129), Expect(2) = 2e-14
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -2

Query: 347 FSVLGKSVVEEVMKEVHWYFIPLVMPLTLDHLV 249
           F VLGK VVEEVMKEVHWY +P ++P  L+H+V
Sbjct: 737 FGVLGKDVVEEVMKEVHWYLVPSILPRKLEHIV 769



 Score = 52.0 bits (123), Expect(2) = 2e-14
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -1

Query: 258 PPCLDHLVGKYIKNIESWSGTRLDIEDVAIQIVDDVLEELIMETI 124
           P  L+H+V K ++  + WSG R D E++ IQIVDDVL+E +METI
Sbjct: 762 PRKLEHIVRKDMEKPQCWSGRRHDTEEIVIQIVDDVLDESVMETI 806


>XP_017258777.1 PREDICTED: uncharacterized protein LOC108227876 [Daucus carota
           subsp. sativus]
          Length = 600

 Score = 54.3 bits (129), Expect(2) = 2e-14
 Identities = 22/33 (66%), Positives = 27/33 (81%)
 Frame = -2

Query: 347 FSVLGKSVVEEVMKEVHWYFIPLVMPLTLDHLV 249
           F VLGK VVEEVMKEVHWY +P ++P  L+H+V
Sbjct: 521 FGVLGKDVVEEVMKEVHWYLVPSILPRKLEHIV 553



 Score = 52.0 bits (123), Expect(2) = 2e-14
 Identities = 24/45 (53%), Positives = 33/45 (73%)
 Frame = -1

Query: 258 PPCLDHLVGKYIKNIESWSGTRLDIEDVAIQIVDDVLEELIMETI 124
           P  L+H+V K ++  + WSG R D E++ IQIVDDVL+E +METI
Sbjct: 546 PRKLEHIVRKDMEKPQCWSGRRHDTEEIVIQIVDDVLDESVMETI 590


>XP_017228215.1 PREDICTED: uncharacterized protein LOC108192435 [Daucus carota
           subsp. sativus] XP_017228216.1 PREDICTED:
           uncharacterized protein LOC108192435 [Daucus carota
           subsp. sativus] XP_017231764.1 PREDICTED:
           uncharacterized protein LOC108206091 [Daucus carota
           subsp. sativus] XP_017231765.1 PREDICTED:
           uncharacterized protein LOC108206091 [Daucus carota
           subsp. sativus] XP_017231766.1 PREDICTED:
           uncharacterized protein LOC108206091 [Daucus carota
           subsp. sativus] XP_017231767.1 PREDICTED:
           uncharacterized protein LOC108206091 [Daucus carota
           subsp. sativus] KZM80088.1 hypothetical protein
           DCAR_000349 [Daucus carota subsp. sativus] KZN07561.1
           hypothetical protein DCAR_008398 [Daucus carota subsp.
           sativus]
          Length = 612

 Score = 45.1 bits (105), Expect(2) = 8e-08
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = -1

Query: 258 PPCLDHLVGKYIKNIESWSGTRLDIEDVAIQIVDDVLEELIMETIFVME 112
           P  L+ L  K  K  E WSG +L+ E+V  Q+ D +LEELIM+T +V E
Sbjct: 563 PRTLEDLAIKDTKKDEIWSGRKLETEEVVTQLTDCMLEELIMQTTYVGE 611



 Score = 38.5 bits (88), Expect(2) = 8e-08
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 341 VLGKSVVEEVMKEVHWYFIPLVMPLTLDHL 252
           VL K+++EE M+E+ WY +P  MP TL+ L
Sbjct: 540 VLAKNMMEEFMEEIQWYLVPPAMPRTLEDL 569


>CDP12031.1 unnamed protein product [Coffea canephora]
          Length = 902

 Score = 47.4 bits (111), Expect(2) = 8e-06
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = -1

Query: 261  GPPCLDHLVGKYIKNIESWSGTRLDIEDVAIQIVDDVLEELIMETIFVME 112
            G P LD LVG  +     W   R D ED+AIQI +DVL+E +M+TI  ++
Sbjct: 852  GQPTLDQLVGMDMAKFGLWFELRPDAEDIAIQIAEDVLQESMMDTILELQ 901



 Score = 29.3 bits (64), Expect(2) = 8e-06
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 338 LGKSVVEEVMKEVHWYFIPLVMPLTLDHLV 249
           L  +V+EEV+KEV+ Y  P +   TLD LV
Sbjct: 831 LEANVIEEVVKEVNCYISPKLGQPTLDQLV 860


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