BLASTX nr result

ID: Panax24_contig00022726 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022726
         (364 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017215834.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5-lik...    94   8e-21
XP_010266545.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5 iso...    91   2e-19
KVH89030.1 Seven-in-absentia protein, sina [Cynara cardunculus v...    88   2e-18
JAT44087.1 E3 ubiquitin-protein ligase SINAT3, partial [Anthuriu...    83   3e-18
KRH64441.1 hypothetical protein GLYMA_04G235700 [Glycine max]          85   7e-18
CDP05062.1 unnamed protein product [Coffea canephora]                  87   8e-18
KRH64442.1 hypothetical protein GLYMA_04G235700 [Glycine max]          85   9e-18
XP_009601706.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-lik...    86   1e-17
XP_010267615.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5-lik...    86   1e-17
KVI04659.1 Seven-in-absentia protein, sina [Cynara cardunculus v...    86   2e-17
XP_019247248.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-lik...    85   3e-17
XP_016510197.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-lik...    85   3e-17
XP_009791626.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-lik...    85   3e-17
KHN19495.1 E3 ubiquitin-protein ligase SINAT3 [Glycine soja] KRH...    85   3e-17
NP_001242196.1 uncharacterized protein LOC100810573 [Glycine max...    85   3e-17
ACJ84732.1 unknown [Medicago truncatula]                               81   4e-17
XP_009402766.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5 iso...    84   6e-17
NP_001268042.1 SINA1p [Vitis vinifera] CAB40577.1 SINA1p [Vitis ...    84   7e-17
XP_010658063.1 PREDICTED: SINA1p isoform X1 [Vitis vinifera] CBI...    84   7e-17
AGZ15276.1 putative ubiquitin ligase SINAT3, partial [Taraxacum ...    84   8e-17

>XP_017215834.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Daucus carota
           subsp. sativus]
          Length = 315

 Score = 94.4 bits (233), Expect = 8e-21
 Identities = 48/74 (64%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
 Frame = +1

Query: 148 MMDSDDSSECIXXXXXXXXXXXXXXXXX-KPYNNISPSG-IHPTTSVHELLECPVCANSM 321
           MMD DDS ECI                  KPY N SP+G IH TTSVHELLECPVC NSM
Sbjct: 1   MMDLDDSIECISTSDLDESVLSPHLSSSTKPYFNKSPNGFIHRTTSVHELLECPVCTNSM 60

Query: 322 YPPIHQCHNGHTLC 363
           YPPIHQCHNGHTLC
Sbjct: 61  YPPIHQCHNGHTLC 74


>XP_010266545.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Nelumbo
           nucifera]
          Length = 312

 Score = 90.9 bits (224), Expect = 2e-19
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+NN+ PS I P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 28  KPHNNVVPSAISPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 71


>KVH89030.1 Seven-in-absentia protein, sina [Cynara cardunculus var. scolymus]
          Length = 318

 Score = 87.8 bits (216), Expect = 2e-18
 Identities = 36/40 (90%), Positives = 37/40 (92%)
 Frame = +1

Query: 244 NISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N+ PS IHPTTSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 67  NVVPSTIHPTTSVHELLECPVCTNSMYPPIHQCHNGHTLC 106


>JAT44087.1 E3 ubiquitin-protein ligase SINAT3, partial [Anthurium amnicola]
          Length = 107

 Score = 82.8 bits (203), Expect = 3e-18
 Identities = 33/41 (80%), Positives = 36/41 (87%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           + + P GI P+TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 49  SGVGPPGISPSTSVHELLECPVCTNSMYPPIHQCHNGHTLC 89


>KRH64441.1 hypothetical protein GLYMA_04G235700 [Glycine max]
          Length = 233

 Score = 85.1 bits (209), Expect = 7e-18
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N++ P+GI P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 43  NSVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 83


>CDP05062.1 unnamed protein product [Coffea canephora]
          Length = 331

 Score = 86.7 bits (213), Expect = 8e-18
 Identities = 38/44 (86%), Positives = 40/44 (90%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP++NI PSGI PT SVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 48  KPHSNIVPSGIAPT-SVHELLECPVCTNSMYPPIHQCHNGHTLC 90


>KRH64442.1 hypothetical protein GLYMA_04G235700 [Glycine max]
          Length = 248

 Score = 85.1 bits (209), Expect = 9e-18
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N++ P+GI P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 43  NSVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 83


>XP_009601706.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana
           tomentosiformis] XP_016481712.1 PREDICTED: E3
           ubiquitin-protein ligase SINAT3-like [Nicotiana tabacum]
          Length = 321

 Score = 86.3 bits (212), Expect = 1e-17
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP++N+ PSGI PT SVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 38  KPHHNVIPSGIAPT-SVHELLECPVCTNSMYPPIHQCHNGHTLC 80


>XP_010267615.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Nelumbo
           nucifera]
          Length = 312

 Score = 85.9 bits (211), Expect = 1e-17
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+NN+    I P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 28  KPHNNVVSPAISPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 71


>KVI04659.1 Seven-in-absentia protein, sina [Cynara cardunculus var. scolymus]
          Length = 316

 Score = 85.5 bits (210), Expect = 2e-17
 Identities = 36/45 (80%), Positives = 39/45 (86%), Gaps = 1/45 (2%)
 Frame = +1

Query: 232 KPYNNIS-PSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+NN+  P G+ P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 31  KPHNNMGIPPGLTPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 75


>XP_019247248.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana
           attenuata] OIT02021.1 e3 ubiquitin-protein ligase sinat3
           [Nicotiana attenuata]
          Length = 321

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+ N+ PSGI PT SVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 38  KPHPNVIPSGIAPT-SVHELLECPVCTNSMYPPIHQCHNGHTLC 80


>XP_016510197.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana
           tabacum]
          Length = 321

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+ N+ PSGI PT SVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 38  KPHPNVVPSGIAPT-SVHELLECPVCTNSMYPPIHQCHNGHTLC 80


>XP_009791626.1 PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Nicotiana
           sylvestris] XP_009791627.1 PREDICTED: E3
           ubiquitin-protein ligase SINAT3-like [Nicotiana
           sylvestris]
          Length = 321

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 37/44 (84%), Positives = 39/44 (88%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP+ N+ PSGI PT SVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 38  KPHPNVVPSGIAPT-SVHELLECPVCTNSMYPPIHQCHNGHTLC 80


>KHN19495.1 E3 ubiquitin-protein ligase SINAT3 [Glycine soja] KRH64440.1
           hypothetical protein GLYMA_04G235700 [Glycine max]
          Length = 323

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N++ P+GI P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 43  NSVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 83


>NP_001242196.1 uncharacterized protein LOC100810573 [Glycine max] ACU18504.1
           unknown [Glycine max]
          Length = 323

 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 34/41 (82%), Positives = 37/41 (90%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N++ P+GI P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 43  NSVGPNGIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 83


>ACJ84732.1 unknown [Medicago truncatula]
          Length = 138

 Score = 80.9 bits (198), Expect = 4e-17
 Identities = 33/41 (80%), Positives = 35/41 (85%)
 Frame = +1

Query: 241 NNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           N + P+ I P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 44  NILGPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 84


>XP_009402766.1 PREDICTED: E3 ubiquitin-protein ligase SINAT5 isoform X1 [Musa
           acuminata subsp. malaccensis]
          Length = 312

 Score = 84.0 bits (206), Expect = 6e-17
 Identities = 39/68 (57%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +1

Query: 163 DSSECIXXXXXXXXXXXXXXXXXKPYNNISP-SGIHPTTSVHELLECPVCANSMYPPIHQ 339
           DS EC+                 KP+   +P +GI P+TSVHELLECPVCANSMYPPIHQ
Sbjct: 4   DSIECVSSIDGMDEEDTARTQSSKPHGGAAPPAGIAPSTSVHELLECPVCANSMYPPIHQ 63

Query: 340 CHNGHTLC 363
           C NGHTLC
Sbjct: 64  CQNGHTLC 71


>NP_001268042.1 SINA1p [Vitis vinifera] CAB40577.1 SINA1p [Vitis vinifera]
          Length = 315

 Score = 84.0 bits (206), Expect = 7e-17
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP++N+    I P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 32  KPHSNVVSPAISPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 75


>XP_010658063.1 PREDICTED: SINA1p isoform X1 [Vitis vinifera] CBI34502.3 unnamed
           protein product, partial [Vitis vinifera]
          Length = 316

 Score = 84.0 bits (206), Expect = 7e-17
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +1

Query: 232 KPYNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           KP++N+    I P TSVHELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 32  KPHSNVVSPAISPATSVHELLECPVCTNSMYPPIHQCHNGHTLC 75


>AGZ15276.1 putative ubiquitin ligase SINAT3, partial [Taraxacum
           brevicorniculatum]
          Length = 331

 Score = 84.0 bits (206), Expect = 8e-17
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +1

Query: 238 YNNISPSGIHPTTSVHELLECPVCANSMYPPIHQCHNGHTLC 363
           Y NI PS IHPT +V+ELLECPVC NSMYPPIHQCHNGHTLC
Sbjct: 49  YVNIVPSKIHPTPTVYELLECPVCTNSMYPPIHQCHNGHTLC 90


Top