BLASTX nr result

ID: Panax24_contig00022718 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022718
         (360 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019174735.1 PREDICTED: zinc finger CCCH domain-containing pro...   120   2e-30
XP_017255667.1 PREDICTED: zinc finger CCCH domain-containing pro...   119   3e-30
XP_017255666.1 PREDICTED: zinc finger CCCH domain-containing pro...   119   9e-30
KZM92665.1 hypothetical protein DCAR_019970 [Daucus carota subsp...   119   5e-29
XP_010655030.1 PREDICTED: zinc finger CCCH domain-containing pro...   112   2e-27
XP_010655028.1 PREDICTED: zinc finger CCCH domain-containing pro...   112   3e-27
XP_004251711.1 PREDICTED: zinc finger CCCH domain-containing pro...   110   3e-26
XP_006345234.1 PREDICTED: zinc finger CCCH domain-containing pro...   109   5e-26
XP_015061935.1 PREDICTED: zinc finger CCCH domain-containing pro...   109   5e-26
BAO49736.1 nuclear pore complex protein CG1a [Nicotiana benthami...   108   1e-25
XP_010278414.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   4e-25
CDP14268.1 unnamed protein product [Coffea canephora]                 107   4e-25
XP_010278413.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   4e-25
BAO49737.1 nuclear pore complex protein CG1b [Nicotiana benthami...   107   4e-25
XP_009798992.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   6e-25
XP_018632427.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   9e-25
XP_009798986.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   9e-25
XP_009798981.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   9e-25
XP_009622534.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   1e-24
XP_009622533.1 PREDICTED: zinc finger CCCH domain-containing pro...   106   1e-24

>XP_019174735.1 PREDICTED: zinc finger CCCH domain-containing protein 46 [Ipomoea
           nil]
          Length = 371

 Score =  120 bits (301), Expect = 2e-30
 Identities = 54/67 (80%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTN-TQQQKPNP 24
           MPPR+EPCRNF RGSC YGDRCKFLHVTQQQ KPN FGFG Q+GTQF  TN  QQQ+PNP
Sbjct: 1   MPPRKEPCRNFLRGSCHYGDRCKFLHVTQQQPKPNVFGFGSQSGTQFQRTNFQQQQQPNP 60

Query: 23  FGFGVQS 3
           FGFGVQ+
Sbjct: 61  FGFGVQN 67


>XP_017255667.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Daucus carota subsp. sativus]
          Length = 331

 Score =  119 bits (298), Expect = 3e-30
 Identities = 53/67 (79%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKP-NAFGFGPQNGTQFPHTNTQQQKPNP 24
           MPPR+E CRNFQRGSCQYGDRCKFLH TQQQ KP NAFGFG QN +QFP  N Q Q+PNP
Sbjct: 1   MPPRKEACRNFQRGSCQYGDRCKFLHTTQQQPKPNNAFGFGSQNASQFPRNNAQPQQPNP 60

Query: 23  FGFGVQS 3
           FGFGVQ+
Sbjct: 61  FGFGVQN 67


>XP_017255666.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Daucus carota subsp. sativus]
          Length = 393

 Score =  119 bits (298), Expect = 9e-30
 Identities = 53/67 (79%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKP-NAFGFGPQNGTQFPHTNTQQQKPNP 24
           MPPR+E CRNFQRGSCQYGDRCKFLH TQQQ KP NAFGFG QN +QFP  N Q Q+PNP
Sbjct: 1   MPPRKEACRNFQRGSCQYGDRCKFLHTTQQQPKPNNAFGFGSQNASQFPRNNAQPQQPNP 60

Query: 23  FGFGVQS 3
           FGFGVQ+
Sbjct: 61  FGFGVQN 67


>KZM92665.1 hypothetical protein DCAR_019970 [Daucus carota subsp. sativus]
          Length = 617

 Score =  119 bits (298), Expect = 5e-29
 Identities = 53/67 (79%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKP-NAFGFGPQNGTQFPHTNTQQQKPNP 24
           MPPR+E CRNFQRGSCQYGDRCKFLH TQQQ KP NAFGFG QN +QFP  N Q Q+PNP
Sbjct: 1   MPPRKEACRNFQRGSCQYGDRCKFLHTTQQQPKPNNAFGFGSQNASQFPRNNAQPQQPNP 60

Query: 23  FGFGVQS 3
           FGFGVQ+
Sbjct: 61  FGFGVQN 67


>XP_010655030.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Vitis vinifera]
          Length = 383

 Score =  112 bits (281), Expect = 2e-27
 Identities = 49/66 (74%), Positives = 54/66 (81%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           M  ++EPCRNFQRGSCQYG+RCKFLHVTQQQ KPN  GFG Q  + F HTN QQQ+ NPF
Sbjct: 1   MNRKKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPF 60

Query: 20  GFGVQS 3
           GFGVQS
Sbjct: 61  GFGVQS 66


>XP_010655028.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Vitis vinifera] XP_010655029.1 PREDICTED: zinc finger
           CCCH domain-containing protein 16 isoform X1 [Vitis
           vinifera] XP_019077814.1 PREDICTED: zinc finger CCCH
           domain-containing protein 16 isoform X1 [Vitis vinifera]
          Length = 396

 Score =  112 bits (281), Expect = 3e-27
 Identities = 49/66 (74%), Positives = 54/66 (81%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           M  ++EPCRNFQRGSCQYG+RCKFLHVTQQQ KPN  GFG Q  + F HTN QQQ+ NPF
Sbjct: 1   MNRKKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQTSSNFQHTNVQQQRSNPF 60

Query: 20  GFGVQS 3
           GFGVQS
Sbjct: 61  GFGVQS 66


>XP_004251711.1 PREDICTED: zinc finger CCCH domain-containing protein 16 [Solanum
           lycopersicum]
          Length = 429

 Score =  110 bits (275), Expect = 3e-26
 Identities = 50/66 (75%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLH  QQQ KPN FGFG Q+ T F  TN QQ K NPF
Sbjct: 1   MPPRKEPCRNFMRGSCQYGERCKFLHAAQQQPKPNPFGFGSQS-TNFQSTNMQQTKSNPF 59

Query: 20  GFGVQS 3
           GFGVQS
Sbjct: 60  GFGVQS 65


>XP_006345234.1 PREDICTED: zinc finger CCCH domain-containing protein 16 [Solanum
           tuberosum]
          Length = 425

 Score =  109 bits (273), Expect = 5e-26
 Identities = 49/66 (74%), Positives = 54/66 (81%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLH  QQQ KPN FGFG Q+ + F +TN QQ K NPF
Sbjct: 1   MPPRKEPCRNFMRGSCQYGERCKFLHAAQQQPKPNPFGFGSQS-SNFQNTNMQQTKSNPF 59

Query: 20  GFGVQS 3
           GFGVQS
Sbjct: 60  GFGVQS 65


>XP_015061935.1 PREDICTED: zinc finger CCCH domain-containing protein 16 [Solanum
           pennellii]
          Length = 429

 Score =  109 bits (273), Expect = 5e-26
 Identities = 50/66 (75%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLH  QQQ KPN FGFG Q+ T F  TN QQ K NPF
Sbjct: 1   MPPRKEPCRNFMRGSCQYGERCKFLHAAQQQPKPNPFGFGIQS-TNFQSTNMQQTKSNPF 59

Query: 20  GFGVQS 3
           GFGVQS
Sbjct: 60  GFGVQS 65


>BAO49736.1 nuclear pore complex protein CG1a [Nicotiana benthamiana]
          Length = 429

 Score =  108 bits (271), Expect = 1e-25
 Identities = 49/66 (74%), Positives = 55/66 (83%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYGDRCKFLHV+QQQ KPN FGFG Q  + F +TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGDRCKFLHVSQQQPKPNPFGFGSQ-PSNFQNTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_010278414.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Nelumbo nucifera]
          Length = 367

 Score =  106 bits (265), Expect = 4e-25
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = -2

Query: 191 RREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFG 12
           ++EPCRNFQRGSCQYG+RCKFLHVTQQQ KPN FGFG   G+Q+ +TN  QQKPNPFGFG
Sbjct: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNPFGFG--TGSQY-NTNQSQQKPNPFGFG 60

Query: 11  VQS 3
           VQS
Sbjct: 61  VQS 63


>CDP14268.1 unnamed protein product [Coffea canephora]
          Length = 427

 Score =  107 bits (267), Expect = 4e-25
 Identities = 46/66 (69%), Positives = 50/66 (75%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPP++E CRNF RGSCQYGDRCKFLH  Q   + N FG G Q G QF H N QQQKPNPF
Sbjct: 1   MPPKKELCRNFLRGSCQYGDRCKFLHAAQTPARQNPFGLGMQTGNQFQHANLQQQKPNPF 60

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 61  GFGVQN 66


>XP_010278413.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Nelumbo nucifera]
          Length = 370

 Score =  106 bits (265), Expect = 4e-25
 Identities = 49/63 (77%), Positives = 55/63 (87%)
 Frame = -2

Query: 191 RREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPFGFG 12
           ++EPCRNFQRGSCQYG+RCKFLHVTQQQ KPN FGFG   G+Q+ +TN  QQKPNPFGFG
Sbjct: 4   KKEPCRNFQRGSCQYGERCKFLHVTQQQPKPNPFGFG--TGSQY-NTNQSQQKPNPFGFG 60

Query: 11  VQS 3
           VQS
Sbjct: 61  VQS 63


>BAO49737.1 nuclear pore complex protein CG1b [Nicotiana benthamiana]
          Length = 431

 Score =  107 bits (267), Expect = 4e-25
 Identities = 48/66 (72%), Positives = 54/66 (81%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F +TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNTFGFGSQ-PSNFQNTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_009798992.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X3
           [Nicotiana sylvestris]
          Length = 383

 Score =  106 bits (264), Expect = 6e-25
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_018632427.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X3
           [Nicotiana tomentosiformis]
          Length = 417

 Score =  106 bits (264), Expect = 9e-25
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_009798986.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Nicotiana sylvestris] XP_016497477.1 PREDICTED: zinc
           finger CCCH domain-containing protein 16-like isoform X2
           [Nicotiana tabacum]
          Length = 417

 Score =  106 bits (264), Expect = 9e-25
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_009798981.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Nicotiana sylvestris] XP_016497476.1 PREDICTED: zinc
           finger CCCH domain-containing protein 16-like isoform X1
           [Nicotiana tabacum]
          Length = 419

 Score =  106 bits (264), Expect = 9e-25
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_009622534.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X2
           [Nicotiana tomentosiformis]
          Length = 446

 Score =  106 bits (264), Expect = 1e-24
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


>XP_009622533.1 PREDICTED: zinc finger CCCH domain-containing protein 16 isoform X1
           [Nicotiana tomentosiformis]
          Length = 447

 Score =  106 bits (264), Expect = 1e-24
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = -2

Query: 200 MPPRREPCRNFQRGSCQYGDRCKFLHVTQQQTKPNAFGFGPQNGTQFPHTNTQQQKPNPF 21
           MPPR+EPCRNF RGSCQYG+RCKFLHV QQQ KPN FGFG Q  + F  TN QQ K NP+
Sbjct: 1   MPPRKEPCRNFLRGSCQYGERCKFLHVAQQQPKPNPFGFGSQ-PSNFQSTNLQQTKSNPY 59

Query: 20  GFGVQS 3
           GFGVQ+
Sbjct: 60  GFGVQN 65


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