BLASTX nr result

ID: Panax24_contig00022715 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022715
         (438 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017230989.1 PREDICTED: photosystem II stability/assembly fact...    80   5e-15
XP_009613611.1 PREDICTED: photosystem II stability/assembly fact...    78   3e-14
XP_010094078.1 hypothetical protein L484_018094 [Morus notabilis...    75   6e-13
XP_019262595.1 PREDICTED: photosystem II stability/assembly fact...    74   8e-13
XP_010249997.1 PREDICTED: photosystem II stability/assembly fact...    74   1e-12
XP_016464815.1 PREDICTED: uncharacterized protein LOC107787720 i...    73   2e-12
XP_009767239.1 PREDICTED: photosystem II stability/assembly fact...    73   2e-12
XP_017192383.1 PREDICTED: photosystem II stability/assembly fact...    72   5e-12
XP_016647272.1 PREDICTED: photosystem II stability/assembly fact...    71   1e-11
XP_008461367.1 PREDICTED: photosystem II stability/assembly fact...    71   1e-11
XP_004297743.1 PREDICTED: photosystem II stability/assembly fact...    71   1e-11
XP_004135957.1 PREDICTED: photosystem II stability/assembly fact...    70   2e-11
XP_008353145.1 PREDICTED: photosystem II stability/assembly fact...    70   2e-11
XP_007222695.1 hypothetical protein PRUPE_ppa006376mg [Prunus pe...    70   2e-11
XP_008340451.1 PREDICTED: photosystem II stability/assembly fact...    70   2e-11
EOX99133.1 Photosystem II stability/assembly factor isoform 3, p...    69   3e-11
EOX99132.1 Photosystem II stability/assembly factor isoform 2 [T...    69   3e-11
KJB31841.1 hypothetical protein B456_005G210500 [Gossypium raimo...    70   3e-11
KJB31842.1 hypothetical protein B456_005G210500 [Gossypium raimo...    70   3e-11
XP_012479823.1 PREDICTED: photosystem II stability/assembly fact...    70   3e-11

>XP_017230989.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Daucus carota subsp. sativus] KZN09920.1
           hypothetical protein DCAR_002576 [Daucus carota subsp.
           sativus]
          Length = 405

 Score = 80.5 bits (197), Expect = 5e-15
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 RNSQSHHHRIVPKASSTNRRKLIADTAALISLAPAFPGFD-VLPAKSEEQLSEWERVSLP 36
           RNS++ +   VPKAS  NRR+LIADTAA  + A +      VLPA+SE+QLSEWERVSLP
Sbjct: 35  RNSKTRNRIAVPKAS-LNRRQLIADTAAATAAAISLGSSAFVLPARSEDQLSEWERVSLP 93

Query: 35  VDPGVVLLDIA 3
           +DPGVVLLDIA
Sbjct: 94  IDPGVVLLDIA 104


>XP_009613611.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Nicotiana tomentosiformis] XP_009613612.1
           PREDICTED: photosystem II stability/assembly factor
           HCF136, chloroplastic [Nicotiana tomentosiformis]
           XP_016513849.1 PREDICTED: photosystem II
           stability/assembly factor HCF136, chloroplastic-like
           [Nicotiana tabacum] XP_016513850.1 PREDICTED:
           photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Nicotiana tabacum]
          Length = 399

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 6/71 (8%)
 Frame = -2

Query: 197 HHH---RIVPKASST-NRRKLIADTAALISLAPAF-PGFDVLPAKSEE-QLSEWERVSLP 36
           HHH   R+VP+ASS+ NRR+LIA+TAA I+L P    G   +PAK++E  LSEWERV LP
Sbjct: 28  HHHQLPRLVPRASSSINRRQLIAETAAAIALPPLLGAGISPIPAKADEVPLSEWERVYLP 87

Query: 35  VDPGVVLLDIA 3
           +DPGVVLLDIA
Sbjct: 88  IDPGVVLLDIA 98


>XP_010094078.1 hypothetical protein L484_018094 [Morus notabilis] EXB55168.1
           hypothetical protein L484_018094 [Morus notabilis]
          Length = 415

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 57/123 (46%), Positives = 70/123 (56%), Gaps = 11/123 (8%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASSTN 159
           MA+ LQL  DCS P+I LK                     + R+SQ    R +PKASS++
Sbjct: 1   MASLLQL-PDCSKPVILLKPSFTSLFFNNTTSPR------HFRSSQPPP-RFIPKASSSS 52

Query: 158 ----------RRKLIADTAAL-ISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLL 12
                     RR+ IA+TAA+ +SLA  F G  V PAKSE+ LSEWER  LP+DPGVVLL
Sbjct: 53  SSSSSSSLLCRRRFIAETAAVSLSLASPFLG-PVQPAKSEDALSEWERCYLPIDPGVVLL 111

Query: 11  DIA 3
           DIA
Sbjct: 112 DIA 114


>XP_019262595.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Nicotiana attenuata] OIT37697.1
           photosystem ii stabilityassembly factor hcf136,
           chloroplastic [Nicotiana attenuata]
          Length = 401

 Score = 74.3 bits (181), Expect = 8e-13
 Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
 Frame = -2

Query: 188 RIVPKAS-STNRRKLIADTAALISLAPAF-PGFDVLPAKSEE-QLSEWERVSLPVDPGVV 18
           R+VP+AS S NRR+LIA+TAA I+L P    G   LPAK++E  LSEWERV LP+DPGVV
Sbjct: 36  RLVPRASASINRRQLIAETAAAIALPPLLGAGISPLPAKADEVPLSEWERVYLPIDPGVV 95

Query: 17  LLDIA 3
           LLDIA
Sbjct: 96  LLDIA 100


>XP_010249997.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Nelumbo nucifera]
          Length = 401

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 49/75 (65%), Positives = 56/75 (74%), Gaps = 5/75 (6%)
 Frame = -2

Query: 212 RNSQSHHHRIVPKAS----STNRRKLIADTAAL-ISLAPAFPGFDVLPAKSEEQLSEWER 48
           RNSQ+   R V +AS    S NRR+ IA+TAA+ +SLAP   GF V PAKSEE LSEWER
Sbjct: 31  RNSQA---RFVTRASLHQPSMNRRQFIAETAAVSLSLAP-LSGF-VEPAKSEEALSEWER 85

Query: 47  VSLPVDPGVVLLDIA 3
           V LP+DPGVVLLDIA
Sbjct: 86  VYLPIDPGVVLLDIA 100


>XP_016464815.1 PREDICTED: uncharacterized protein LOC107787720 isoform X2
           [Nicotiana tabacum]
          Length = 345

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = -2

Query: 188 RIVPKAS-STNRRKLIADTAALISLAPAF-PGFDVLPAKSEE-QLSEWERVSLPVDPGVV 18
           R+VP+AS S NRR+LIA+TAA I L P    G   LPAK++E  LSEWERV LP+DPGVV
Sbjct: 32  RLVPRASASINRRQLIAETAAAIVLPPLLGAGISPLPAKADEVPLSEWERVYLPIDPGVV 91

Query: 17  LLDIA 3
           LLDIA
Sbjct: 92  LLDIA 96


>XP_009767239.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Nicotiana sylvestris] XP_009767240.1
           PREDICTED: photosystem II stability/assembly factor
           HCF136, chloroplastic [Nicotiana sylvestris]
           XP_016464814.1 PREDICTED: photosystem II
           stability/assembly factor HCF136, chloroplastic-like
           isoform X1 [Nicotiana tabacum]
          Length = 397

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = -2

Query: 188 RIVPKAS-STNRRKLIADTAALISLAPAF-PGFDVLPAKSEE-QLSEWERVSLPVDPGVV 18
           R+VP+AS S NRR+LIA+TAA I L P    G   LPAK++E  LSEWERV LP+DPGVV
Sbjct: 32  RLVPRASASINRRQLIAETAAAIVLPPLLGAGISPLPAKADEVPLSEWERVYLPIDPGVV 91

Query: 17  LLDIA 3
           LLDIA
Sbjct: 92  LLDIA 96


>XP_017192383.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Malus domestica] XP_017192384.1
           PREDICTED: photosystem II stability/assembly factor
           HCF136, chloroplastic-like [Malus domestica]
          Length = 410

 Score = 72.0 bits (175), Expect = 5e-12
 Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASSTN 159
           MAT LQL TD S P + LK                     +  +S SH       +S  +
Sbjct: 3   MATALQLTTDFSKPTVLLKPFLEFTTIPRHFRTSLSIPRASSSSSSSH-------SSLVS 55

Query: 158 RRKLIADTAALISLAPAFPGF-DVLPAKSEEQ-LSEWERVSLPVDPGVVLLDIA 3
           RR  +++TAAL       P F  +LPAK+E+  LSEWE+VSLP+DPGVVLLDIA
Sbjct: 56  RRHFVSETAALSLSITTLPLFGSILPAKAEDPTLSEWEKVSLPIDPGVVLLDIA 109


>XP_016647272.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Prunus mume]
          Length = 401

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 53/116 (45%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFN--LRNSQSHHHRIVPKASS 165
           MAT LQL TD S PII +K                    FN  +R S S        +S 
Sbjct: 3   MATTLQLTTDFSKPIIVVKPSLEFASTPRHCRTSLSLPRFNNIVRASSSSSD-----SSL 57

Query: 164 TNRRKLIADTAALISLAPAFPGF-DVLPAKSEEQ-LSEWERVSLPVDPGVVLLDIA 3
            +RR  +++TAAL       P F  V PAKSEE  LSEWE+VSLP+DPGVVLLDIA
Sbjct: 58  VSRRHFVSETAALSLTLTTLPLFGSVQPAKSEESALSEWEKVSLPIDPGVVLLDIA 113


>XP_008461367.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Cucumis melo]
          Length = 405

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 40/63 (63%), Positives = 47/63 (74%), Gaps = 4/63 (6%)
 Frame = -2

Query: 179 PKAS----STNRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLL 12
           PKAS    S NRR+ +ADTAA +SL+ +     V PAKSEE LSEWER+ LP+DPGVVLL
Sbjct: 42  PKASLHNSSINRRQFVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLL 101

Query: 11  DIA 3
           DIA
Sbjct: 102 DIA 104


>XP_004297743.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Fragaria vesca subsp. vesca]
          Length = 406

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = -2

Query: 188 RIVPKASSTNRRKLIADTAALISLAPAFP--GFDVLPAKSEEQ-LSEWERVSLPVDPGVV 18
           R +P+AS T RR L++DTAAL SLA   P  G   LPAKSEE  LSEWE+VSLP+DPGVV
Sbjct: 43  RFIPRASLT-RRHLVSDTAAL-SLALTVPLLGSSALPAKSEEPALSEWEKVSLPIDPGVV 100

Query: 17  LLDIA 3
           LLDIA
Sbjct: 101 LLDIA 105


>XP_004135957.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Cucumis sativus] KGN45080.1 hypothetical
           protein Csa_7G420730 [Cucumis sativus]
          Length = 406

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 40/63 (63%), Positives = 46/63 (73%), Gaps = 4/63 (6%)
 Frame = -2

Query: 179 PKAS----STNRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLL 12
           PKAS    S NRR  +ADTAA +SL+ +     V PAKSEE LSEWER+ LP+DPGVVLL
Sbjct: 43  PKASLHNSSINRRHFVADTAAAVSLSLSPFIAPVQPAKSEESLSEWERLYLPIDPGVVLL 102

Query: 11  DIA 3
           DIA
Sbjct: 103 DIA 105


>XP_008353145.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic-like [Malus domestica]
          Length = 322

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 53/121 (43%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASSTN 159
           MAT+LQL TD S P I LK                       R S S     +P+ASS++
Sbjct: 3   MATSLQLTTDFSKPTIHLKPSLEFATTPR-----------RFRTSLS-----IPRASSSS 46

Query: 158 -------RRKLIADTAALISLAPAFPGF-DVLPAKSEEQ-LSEWERVSLPVDPGVVLLDI 6
                  RR  +++TAAL       P F  VLPAK+E+  LSEWE+VSLP+DPGVVLLDI
Sbjct: 47  SDSSLVSRRHFVSETAALSLSLTTLPLFGSVLPAKAEDPALSEWEKVSLPIDPGVVLLDI 106

Query: 5   A 3
           A
Sbjct: 107 A 107


>XP_007222695.1 hypothetical protein PRUPE_ppa006376mg [Prunus persica] ONI32067.1
           hypothetical protein PRUPE_1G347100 [Prunus persica]
          Length = 414

 Score = 70.5 bits (171), Expect = 2e-11
 Identities = 52/116 (44%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFN--LRNSQSHHHRIVPKASS 165
           MAT LQL TD S PII +K                    FN   R S S        +S 
Sbjct: 3   MATTLQLTTDLSKPIIVVKPSLEFASTPRHCRTSLSLPRFNNIARASSSSSD-----SSL 57

Query: 164 TNRRKLIADTAALISLAPAFPGF-DVLPAKSEEQ-LSEWERVSLPVDPGVVLLDIA 3
            +RR  +++TAAL       P F  + PAKSEE  LSEWE+VSLP+DPGVVLLDIA
Sbjct: 58  VSRRHFVSETAALSLTLTTLPLFGSIQPAKSEESALSEWEKVSLPIDPGVVLLDIA 113


>XP_008340451.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Malus domestica]
          Length = 408

 Score = 70.1 bits (170), Expect = 2e-11
 Identities = 53/121 (43%), Positives = 65/121 (53%), Gaps = 9/121 (7%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASSTN 159
           MAT+LQL TD S P I LK                       R S S     +P+ASS++
Sbjct: 3   MATSLQLTTDFSKPTIHLKPSLEFATTPR-----------RFRTSLS-----IPRASSSS 46

Query: 158 -------RRKLIADTAALISLAPAFPGF-DVLPAKSEEQ-LSEWERVSLPVDPGVVLLDI 6
                  RR  +++TAAL       P F  VLPAK+E+  LSEWE+VSLP+DPGVVLLDI
Sbjct: 47  SDSSLVSRRHFVSETAALSLSLTTLPLFGSVLPAKAEDPALSEWEKVSLPIDPGVVLLDI 106

Query: 5   A 3
           A
Sbjct: 107 A 107


>EOX99133.1 Photosystem II stability/assembly factor isoform 3, partial
           [Theobroma cacao]
          Length = 294

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -2

Query: 203 QSHHHRIVPKASSTNRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPG 24
           Q  HH      +  NRR+LI+ TA+L SL+ A      LPAKSEE LSEWERV LP+DPG
Sbjct: 45  QQPHHSSSSSPTLVNRRQLISQTASL-SLSVATLSALQLPAKSEEVLSEWERVYLPIDPG 103

Query: 23  VVLLDIA 3
           VVLLDIA
Sbjct: 104 VVLLDIA 110


>EOX99132.1 Photosystem II stability/assembly factor isoform 2 [Theobroma
           cacao]
          Length = 298

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -2

Query: 203 QSHHHRIVPKASSTNRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPG 24
           Q  HH      +  NRR+LI+ TA+L SL+ A      LPAKSEE LSEWERV LP+DPG
Sbjct: 45  QQPHHSSSSSPTLVNRRQLISQTASL-SLSVATLSALQLPAKSEEVLSEWERVYLPIDPG 103

Query: 23  VVLLDIA 3
           VVLLDIA
Sbjct: 104 VVLLDIA 110


>KJB31841.1 hypothetical protein B456_005G210500 [Gossypium raimondii]
          Length = 366

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 53/117 (45%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASST- 162
           M  NLQ  TDCSN I +L                         +  S HH   P +SS+ 
Sbjct: 4   MTPNLQA-TDCSNLIPSLTSLFPPRLLHRPLSLPHSRFI----SKASLHHPSSPSSSSSP 58

Query: 161 ----NRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLLDIA 3
               NRR++I+ TA+ ISL+ A      LPAKSEE LSEWERV LP+DPGVVLLDIA
Sbjct: 59  PSLVNRRQIISQTAS-ISLSLATLSSLPLPAKSEEVLSEWERVYLPIDPGVVLLDIA 114


>KJB31842.1 hypothetical protein B456_005G210500 [Gossypium raimondii]
          Length = 394

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 53/117 (45%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASST- 162
           M  NLQ  TDCSN I +L                         +  S HH   P +SS+ 
Sbjct: 4   MTPNLQA-TDCSNLIPSLTSLFPPRLLHRPLSLPHSRFI----SKASLHHPSSPSSSSSP 58

Query: 161 ----NRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLLDIA 3
               NRR++I+ TA+ ISL+ A      LPAKSEE LSEWERV LP+DPGVVLLDIA
Sbjct: 59  PSLVNRRQIISQTAS-ISLSLATLSSLPLPAKSEEVLSEWERVYLPIDPGVVLLDIA 114


>XP_012479823.1 PREDICTED: photosystem II stability/assembly factor HCF136,
           chloroplastic [Gossypium raimondii] KJB31840.1
           hypothetical protein B456_005G210500 [Gossypium
           raimondii]
          Length = 415

 Score = 69.7 bits (169), Expect = 3e-11
 Identities = 53/117 (45%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
 Frame = -2

Query: 338 MATNLQLLTDCSNPIITLKXXXXXXXXXXXXXXXXXXXXFNLRNSQSHHHRIVPKASST- 162
           M  NLQ  TDCSN I +L                         +  S HH   P +SS+ 
Sbjct: 4   MTPNLQA-TDCSNLIPSLTSLFPPRLLHRPLSLPHSRFI----SKASLHHPSSPSSSSSP 58

Query: 161 ----NRRKLIADTAALISLAPAFPGFDVLPAKSEEQLSEWERVSLPVDPGVVLLDIA 3
               NRR++I+ TA+ ISL+ A      LPAKSEE LSEWERV LP+DPGVVLLDIA
Sbjct: 59  PSLVNRRQIISQTAS-ISLSLATLSSLPLPAKSEEVLSEWERVYLPIDPGVVLLDIA 114