BLASTX nr result

ID: Panax24_contig00022594 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022594
         (351 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_011034079.1 PREDICTED: transcription elongation regulator 1-l...    60   4e-08
XP_011034078.1 PREDICTED: transcription elongation regulator 1-l...    60   4e-08
XP_011034077.1 PREDICTED: transcription elongation regulator 1-l...    60   4e-08
XP_008361807.1 PREDICTED: uncharacterized protein LOC103425503 i...    54   5e-06
XP_017226434.1 PREDICTED: uncharacterized protein LOC108202509 i...    54   5e-06

>XP_011034079.1 PREDICTED: transcription elongation regulator 1-like isoform X3
            [Populus euphratica]
          Length = 1039

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 237  HSKHSQRRHSPYSSLETTRYVAVRSF*IKLVLMFLTHTHQY 115
            HSKHSQRRHSPYSS+ETTRYV+ + F IK+VL+FL H   +
Sbjct: 960  HSKHSQRRHSPYSSIETTRYVS-KQFKIKIVLLFLRHAQPF 999


>XP_011034078.1 PREDICTED: transcription elongation regulator 1-like isoform X2
            [Populus euphratica]
          Length = 1040

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 237  HSKHSQRRHSPYSSLETTRYVAVRSF*IKLVLMFLTHTHQY 115
            HSKHSQRRHSPYSS+ETTRYV+ + F IK+VL+FL H   +
Sbjct: 961  HSKHSQRRHSPYSSIETTRYVS-KQFKIKIVLLFLRHAQPF 1000


>XP_011034077.1 PREDICTED: transcription elongation regulator 1-like isoform X1
            [Populus euphratica]
          Length = 1041

 Score = 60.1 bits (144), Expect = 4e-08
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 237  HSKHSQRRHSPYSSLETTRYVAVRSF*IKLVLMFLTHTHQY 115
            HSKHSQRRHSPYSS+ETTRYV+ + F IK+VL+FL H   +
Sbjct: 962  HSKHSQRRHSPYSSIETTRYVS-KQFKIKIVLLFLRHAQPF 1001


>XP_008361807.1 PREDICTED: uncharacterized protein LOC103425503 isoform X1 [Malus
           domestica]
          Length = 679

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 32/38 (84%)
 Frame = -1

Query: 237 HSKHSQRRHSPYSSLETTRYVAVRSF*IKLVLMFLTHT 124
           HSKHSQRRHSPYSSLET+RYVA++S    L ++F T+T
Sbjct: 637 HSKHSQRRHSPYSSLETSRYVAMKSL---LCIVFQTYT 671


>XP_017226434.1 PREDICTED: uncharacterized protein LOC108202509 isoform X1 [Daucus
            carota subsp. sativus]
          Length = 954

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 28/36 (77%), Positives = 29/36 (80%)
 Frame = -1

Query: 237  HSKHSQRRHSPYSSLETTRYVAVRSF*IKLVLMFLT 130
            HSKHSQRRHSPYSSLETTRYV VR   +  V MFLT
Sbjct: 916  HSKHSQRRHSPYSSLETTRYVVVRLLCLACV-MFLT 950


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