BLASTX nr result

ID: Panax24_contig00022446 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022446
         (761 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017234619.1 PREDICTED: uncharacterized protein LOC108208589 [...    80   3e-15
XP_019197901.1 PREDICTED: uncharacterized protein LOC109191710 [...    63   6e-09
XP_011021930.1 PREDICTED: uncharacterized protein LOC105123867 i...    57   1e-06
XP_010027778.1 PREDICTED: uncharacterized protein LOC104418203 [...    42   5e-06

>XP_017234619.1 PREDICTED: uncharacterized protein LOC108208589 [Daucus carota
           subsp. sativus] KZN08711.1 hypothetical protein
           DCAR_001367 [Daucus carota subsp. sativus]
          Length = 137

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 55/160 (34%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
 Frame = +1

Query: 100 MFNSGDELIINSYRIPWLIWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
           MF+ GDELII+SYRIPWLIW                                        
Sbjct: 1   MFDHGDELIIDSYRIPWLIWIQLVVMFLLILLFYFFSFDDHSPT---------------- 44

Query: 280 XXXXXXXTNTAAAGFLHDSQA-RENQSIKETGSGSSRVI------------TGREGASVS 420
                  +N A++   +++Q  REN  IKE GS +SR I            +G++  S  
Sbjct: 45  -------SNHASSSSNNNTQEPRENLIIKEPGSRASREIERREDINETEGSSGKDETSDP 97

Query: 421 PFGNSHHPCHFLGLAKQAFLKCLGLDXXXXXXXXXNQRKE 540
            F ++ HPCHFLG+AKQAFLKCLGLD         N+R++
Sbjct: 98  HFRHAQHPCHFLGIAKQAFLKCLGLDLSSESSSDSNERRD 137


>XP_019197901.1 PREDICTED: uncharacterized protein LOC109191710 [Ipomoea nil]
          Length = 132

 Score = 62.8 bits (151), Expect = 6e-09
 Identities = 45/143 (31%), Positives = 58/143 (40%), Gaps = 10/143 (6%)
 Frame = +1

Query: 100 MFNSGDELIINSYRIPWLIWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
           M+  G+E II SY++PWLIW                                        
Sbjct: 1   MYEFGEEFIIESYKVPWLIWIQLLITLLLLLLLLVGFSLVASDPSNHP------------ 48

Query: 280 XXXXXXXTNTAAAGFLHDSQARENQSIKET---------GSGSSR-VITGREGASVSPFG 429
                   ++AA G    S  + N  I+           G+ +SR V+ G E +    FG
Sbjct: 49  --------SSAACGSRPSSSGQSNHKIQRIDEKQKFEGLGTTTSRGVLRGEERS----FG 96

Query: 430 NSHHPCHFLGLAKQAFLKCLGLD 498
              HPCH+LGLAKQAFLKCLGLD
Sbjct: 97  GRRHPCHYLGLAKQAFLKCLGLD 119


>XP_011021930.1 PREDICTED: uncharacterized protein LOC105123867 isoform X1 [Populus
           euphratica]
          Length = 159

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/84 (42%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
 Frame = +1

Query: 307 TAAAGFLHDSQARENQSIKETGSGSSRVITGREGASVSPFGNS-----HHPCHFLGLAKQ 471
           T A   L  SQ  +N+SIK    G     TGR   S   FGNS      HPC++  LAK 
Sbjct: 80  TTATNCLQHSQVHQNRSIK----GEITTNTGRRIVSEDNFGNSANFIDFHPCNYFRLAKL 135

Query: 472 AFLKCLGLDXXXXXXXXXNQRKER 543
           AFLKC GLD          Q+KER
Sbjct: 136 AFLKCFGLDYMSDNSLNSEQKKER 159


>XP_010027778.1 PREDICTED: uncharacterized protein LOC104418203 [Eucalyptus
           grandis] KCW54377.1 hypothetical protein EUGRSUZ_I00328
           [Eucalyptus grandis]
          Length = 166

 Score = 42.4 bits (98), Expect(3) = 5e-06
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
 Frame = +1

Query: 337 QARENQSIKE--TGSGSSRVITGR---EGASVSPFGNSHHPCHFLGLAKQAFLKCLGLD 498
           Q  E+QS+K     S S RV       EG + S     HHPC  + LA+ AFLKCLGLD
Sbjct: 95  QVSESQSVKGFIAMSASRRVAVEEDEIEGDNSSHGYMDHHPCSIVRLARMAFLKCLGLD 153



 Score = 34.7 bits (78), Expect(3) = 5e-06
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 100 MFNSGDELIINSYRIPWLIW 159
           M   GDEL++ S RIPWLIW
Sbjct: 1   MVEFGDELVVQSLRIPWLIW 20



 Score = 21.2 bits (43), Expect(3) = 5e-06
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 233 PPQNQLHPPSQRLLPLAQCFYPPPIPLPQA 322
           P  +   P S RL P+     PPP   P+A
Sbjct: 54  PSSSSSTPASSRLPPVEPRGSPPPPSPPRA 83


Top