BLASTX nr result

ID: Panax24_contig00022202 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00022202
         (385 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_019196689.1 PREDICTED: rab GTPase-activating protein 1 isofor...    56   2e-06
XP_019196688.1 PREDICTED: rab GTPase-activating protein 1 isofor...    56   2e-06
XP_019196687.1 PREDICTED: rab GTPase-activating protein 1 isofor...    56   2e-06

>XP_019196689.1 PREDICTED: rab GTPase-activating protein 1 isoform X3 [Ipomoea nil]
          Length = 812

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 37/76 (48%), Positives = 39/76 (51%)
 Frame = +3

Query: 6   EQLEQDVAELWQALADKQEQENAMLQGPLLLLTKLYTSVVDLLPHNTILSQ*MAXXXXXX 185
           EQLEQD+AEL QALADKQEQENAMLQ                                  
Sbjct: 646 EQLEQDIAELRQALADKQEQENAMLQ---------------------------------- 671

Query: 186 XXMRVEQEQRVTEDAK 233
             MRVEQEQRVTEDA+
Sbjct: 672 VLMRVEQEQRVTEDAR 687


>XP_019196688.1 PREDICTED: rab GTPase-activating protein 1 isoform X2 [Ipomoea nil]
          Length = 818

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 37/76 (48%), Positives = 39/76 (51%)
 Frame = +3

Query: 6   EQLEQDVAELWQALADKQEQENAMLQGPLLLLTKLYTSVVDLLPHNTILSQ*MAXXXXXX 185
           EQLEQD+AEL QALADKQEQENAMLQ                                  
Sbjct: 646 EQLEQDIAELRQALADKQEQENAMLQ---------------------------------- 671

Query: 186 XXMRVEQEQRVTEDAK 233
             MRVEQEQRVTEDA+
Sbjct: 672 VLMRVEQEQRVTEDAR 687


>XP_019196687.1 PREDICTED: rab GTPase-activating protein 1 isoform X1 [Ipomoea nil]
          Length = 819

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 37/76 (48%), Positives = 39/76 (51%)
 Frame = +3

Query: 6   EQLEQDVAELWQALADKQEQENAMLQGPLLLLTKLYTSVVDLLPHNTILSQ*MAXXXXXX 185
           EQLEQD+AEL QALADKQEQENAMLQ                                  
Sbjct: 646 EQLEQDIAELRQALADKQEQENAMLQ---------------------------------- 671

Query: 186 XXMRVEQEQRVTEDAK 233
             MRVEQEQRVTEDA+
Sbjct: 672 VLMRVEQEQRVTEDAR 687


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