BLASTX nr result

ID: Panax24_contig00021988 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00021988
         (364 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_006356040.1 PREDICTED: probable histone H2AXb [Solanum tubero...    86   5e-19
XP_004234016.1 PREDICTED: probable histone H2AXb [Solanum lycope...    86   5e-19
KFK39387.1 hypothetical protein AALP_AA3G238600 [Arabis alpina]        85   1e-18
XP_008363687.1 PREDICTED: histone H2AX [Malus domestica]               84   3e-18
XP_004290709.1 PREDICTED: histone H2AX [Fragaria vesca subsp. ve...    84   3e-18
XP_004302471.1 PREDICTED: probable histone H2AXb [Fragaria vesca...    84   3e-18
NP_172363.1 Histone superfamily protein [Arabidopsis thaliana] O...    84   3e-18
XP_010466270.1 PREDICTED: probable histone H2A.2 [Camelina sativa]     83   4e-18
XP_010509202.1 PREDICTED: probable histone H2A.2 [Camelina sativ...    83   4e-18
XP_006296635.1 hypothetical protein CARUB_v10014905mg [Capsella ...    83   4e-18
XP_019579073.1 PREDICTED: probable histone H2A.2 [Rhinolophus si...    83   4e-18
XP_009145600.1 PREDICTED: probable histone H2A.2 [Brassica rapa]       83   4e-18
XP_013673329.1 PREDICTED: probable histone H2A.2 [Brassica napus...    83   4e-18
XP_013625239.1 PREDICTED: probable histone H2A.2 [Brassica olera...    83   4e-18
XP_006406360.1 hypothetical protein EUTSA_v10021749mg [Eutrema s...    83   4e-18
XP_013611607.1 PREDICTED: probable histone H2A.2 [Brassica olera...    83   5e-18
XP_009110281.1 PREDICTED: probable histone H2A.2 [Brassica rapa]...    83   5e-18
XP_018488693.1 PREDICTED: probable histone H2A.2 [Raphanus sativ...    83   5e-18
XP_006305729.1 hypothetical protein CARUB_v10010499mg, partial [...    84   5e-18
XP_003626341.2 core histone H2A/H2B/H3/H4 [Medicago truncatula] ...    83   6e-18

>XP_006356040.1 PREDICTED: probable histone H2AXb [Solanum tuberosum]
          Length = 142

 Score = 85.9 bits (211), Expect = 5e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLS-AVLEYLAAE 69


>XP_004234016.1 PREDICTED: probable histone H2AXb [Solanum lycopersicum]
           XP_015067287.1 PREDICTED: probable histone H2AXb
           [Solanum pennellii]
          Length = 142

 Score = 85.9 bits (211), Expect = 5e-19
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLS-AVLEYLAAE 69


>KFK39387.1 hypothetical protein AALP_AA3G238600 [Arabis alpina]
          Length = 132

 Score = 84.7 bits (208), Expect = 1e-18
 Identities = 44/47 (93%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_008363687.1 PREDICTED: histone H2AX [Malus domestica]
          Length = 138

 Score = 84.0 bits (206), Expect = 3e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 19  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLS-AVLEYLAAE 65


>XP_004290709.1 PREDICTED: histone H2AX [Fragaria vesca subsp. vesca]
          Length = 138

 Score = 84.0 bits (206), Expect = 3e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 19  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLS-AVLEYLAAE 65


>XP_004302471.1 PREDICTED: probable histone H2AXb [Fragaria vesca subsp. vesca]
          Length = 141

 Score = 84.0 bits (206), Expect = 3e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 22  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLS-AVLEYLAAE 68


>NP_172363.1 Histone superfamily protein [Arabidopsis thaliana] O04848.1
           RecName: Full=Probable histone H2AXa; AltName: Full=HTA5
           AAL06545.1 At1g08880/F7G19_24 [Arabidopsis thaliana]
           AAB70416.1 Strong similarity to Picea histone H2A
           (gb|X67819). ESTs gb|ATTS3874,gb|T46627,gb|T14194 come
           from this gene [Arabidopsis thaliana] AAM16236.1
           At1g08880/F7G19_24 [Arabidopsis thaliana] AEE28361.1
           Histone superfamily protein [Arabidopsis thaliana]
           OAP14486.1 HTA5 [Arabidopsis thaliana]
          Length = 142

 Score = 84.0 bits (206), Expect = 3e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 23  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLS-AVLEYLAAE 69


>XP_010466270.1 PREDICTED: probable histone H2A.2 [Camelina sativa]
          Length = 132

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_010509202.1 PREDICTED: probable histone H2A.2 [Camelina sativa] XP_010488056.1
           PREDICTED: probable histone H2A.2 [Camelina sativa]
          Length = 132

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_006296635.1 hypothetical protein CARUB_v10014905mg [Capsella rubella]
           EOA29533.1 hypothetical protein CARUB_v10014905mg
           [Capsella rubella]
          Length = 132

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_019579073.1 PREDICTED: probable histone H2A.2 [Rhinolophus sinicus]
          Length = 133

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_009145600.1 PREDICTED: probable histone H2A.2 [Brassica rapa]
          Length = 133

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_013673329.1 PREDICTED: probable histone H2A.2 [Brassica napus] CDY29453.1
           BnaC05g32170D [Brassica napus]
          Length = 133

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_013625239.1 PREDICTED: probable histone H2A.2 [Brassica oleracea var. oleracea]
           XP_013583993.1 PREDICTED: probable histone H2A.2
           [Brassica oleracea var. oleracea] XP_013749283.1
           PREDICTED: probable histone H2A.2 [Brassica napus]
           XP_013685019.1 PREDICTED: probable histone H2A.2
           [Brassica napus] XP_018491363.1 PREDICTED: probable
           histone H2A.2 [Raphanus sativus] CDY32388.1
           BnaC03g41720D [Brassica napus] CDY19616.1 BnaA05g20240D
           [Brassica napus]
          Length = 133

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_006406360.1 hypothetical protein EUTSA_v10021749mg [Eutrema salsugineum]
           ESQ47813.1 hypothetical protein EUTSA_v10021749mg
           [Eutrema salsugineum]
          Length = 133

 Score = 83.2 bits (204), Expect = 4e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_013611607.1 PREDICTED: probable histone H2A.2 [Brassica oleracea var. oleracea]
           XP_013678561.1 PREDICTED: probable histone H2A.2
           [Brassica napus] XP_013693675.1 PREDICTED: probable
           histone H2A.2 [Brassica napus] CDY43067.1 BnaCnng10730D
           [Brassica napus]
          Length = 134

 Score = 83.2 bits (204), Expect = 5e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_009110281.1 PREDICTED: probable histone H2A.2 [Brassica rapa] XP_013640686.1
           PREDICTED: probable histone H2A.2 [Brassica napus]
           XP_018435081.1 PREDICTED: probable histone H2A.2
           [Raphanus sativus] XP_018437054.1 PREDICTED: probable
           histone H2A.2 [Raphanus sativus] CDY53617.1
           BnaA01g25600D [Brassica napus]
          Length = 134

 Score = 83.2 bits (204), Expect = 5e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_018488693.1 PREDICTED: probable histone H2A.2 [Raphanus sativus] XP_018491895.1
           PREDICTED: probable histone H2A.2 [Raphanus sativus]
          Length = 135

 Score = 83.2 bits (204), Expect = 5e-18
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +2

Query: 206 TRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           +RSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYL+ AVLEYL AE
Sbjct: 18  SRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLA-AVLEYLAAE 63


>XP_006305729.1 hypothetical protein CARUB_v10010499mg, partial [Capsella rubella]
           EOA38627.1 hypothetical protein CARUB_v10010499mg,
           partial [Capsella rubella]
          Length = 164

 Score = 84.0 bits (206), Expect = 5e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK+GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 45  VSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLS-AVLEYLAAE 91


>XP_003626341.2 core histone H2A/H2B/H3/H4 [Medicago truncatula] AES82559.2 core
           histone H2A/H2B/H3/H4 [Medicago truncatula]
          Length = 130

 Score = 82.8 bits (203), Expect = 6e-18
 Identities = 44/48 (91%), Positives = 45/48 (93%)
 Frame = +2

Query: 203 VTRSSKAGLQFPVGRIARFLKNGKYAERVGAGAPVYLSVAVLEYLGAE 346
           V+RSSKAGLQFPVGRIARFLK GKYAERVGAGAPVYLS AVLEYL AE
Sbjct: 22  VSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLS-AVLEYLAAE 68


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