BLASTX nr result

ID: Panax24_contig00021987 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00021987
         (362 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017247621.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 53...    58   2e-07

>XP_017247621.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Daucus
           carota subsp. sativus] KZM99307.1 hypothetical protein
           DCAR_013331 [Daucus carota subsp. sativus]
          Length = 737

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 43/112 (38%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = -1

Query: 308 LASLTQQALIVSNHNNEQF-----IAGNIHNVSTSTSKIHNYTGGFGSSKVQIESFLRKD 144
           LASLTQQ+  +  + +  F     I+      ST +  IH  T  FG+  V     +++D
Sbjct: 16  LASLTQQSFSILQNTHHSFSTDHLISQQAPQFSTFSGNIHRDTYVFGNKSVP---GVKRD 72

Query: 143 FHAGAGGSLNFGASSGLSKAACYAVADSSDK-----GASNDERLEIAKLGIA 3
           FH G  G LNF  S GLS A    V + +D+     G+ NDE LEI+KLGI+
Sbjct: 73  FHGG--GLLNFRGSFGLSNAVRSVVEEVNDEEVKKGGSGNDEGLEISKLGIS 122


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