BLASTX nr result

ID: Panax24_contig00021783 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00021783
         (360 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]      65   1e-11
NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris ...    60   3e-09
KJB09779.1 hypothetical protein B456_001G164700, partial [Gossyp...    55   2e-06

>OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]
          Length = 81

 Score = 65.5 bits (158), Expect = 1e-11
 Identities = 31/42 (73%), Positives = 34/42 (80%)
 Frame = +1

Query: 232 ACSRSLLAYVVVGLPTRTRPQECLLGSGRSQADTYDRRRKDP 357
           +CS SLLAYVVV LP   RP ECLLGSGR QADTY+R R+DP
Sbjct: 17  SCSNSLLAYVVVELPALIRPPECLLGSGRRQADTYNRGREDP 58


>NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] YP_004222369.1 hypothetical protein
           BevumaM_p136 (mitochondrion) [Beta vulgaris subsp.
           maritima] YP_004842174.1 hypothetical protein BemaM_p130
           (mitochondrion) [Beta macrocarpa] BAA99316.1 orf107b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14008.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17584.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20702.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24979.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54138.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 107

 Score = 59.7 bits (143), Expect = 3e-09
 Identities = 30/35 (85%), Positives = 32/35 (91%)
 Frame = -1

Query: 357 GVFPSPIVCIGLASSRTKEAFLRARACRKADDYIS 253
           GVFPSPIVCIGLASSR+K  +LRARACRKAD YIS
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>KJB09779.1 hypothetical protein B456_001G164700, partial [Gossypium raimondii]
          Length = 231

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -2

Query: 356 GSFLRLSYVSAWLRPEPRRHSCGRVR 279
           GSFLRLSYVSAWLRPEPRRHS GRVR
Sbjct: 156 GSFLRLSYVSAWLRPEPRRHSGGRVR 181


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