BLASTX nr result

ID: Panax24_contig00021486 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00021486
         (959 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CDP06750.1 unnamed protein product [Coffea canephora]                  66   3e-08

>CDP06750.1 unnamed protein product [Coffea canephora]
          Length = 1406

 Score = 66.2 bits (160), Expect = 3e-08
 Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 3/140 (2%)
 Frame = -3

Query: 765  LVSLPMAGLPTTVTP---SMLVVTPSSEFQQAAPSTGLHIQRSSASLLMTTPSPVTPPMQ 595
            L+++  A    T  P   S+   T +   QQ A  T    + SS++L + TP   T  M+
Sbjct: 1256 LLAVQQAAARNTAIPEQNSIETQTSNLVGQQTAAHTTQRSEISSSNLPVPTPPSQTSAME 1315

Query: 594  AMIHSTPVPQNAGCTPRFDQSPAGQITAYPLVTMAMQSVSHGSVLLTNSPRPLNIPTIQC 415
             M HS+ + Q  G    +  SP+    A    +  +    H SVL T+  RP +I  I+ 
Sbjct: 1316 VMAHSSAISQT-GTNAAY--SPSSTCLAMTGSSETLTGPYHPSVLSTSHCRPPSISNIRL 1372

Query: 414  SSNLSAGNSLRAPAPHLRHS 355
            S NL+AG  +RAPAPHLRH+
Sbjct: 1373 SGNLNAGREVRAPAPHLRHA 1392


Top