BLASTX nr result
ID: Panax24_contig00021166
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00021166
(489 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_009776250.1 PREDICTED: pentatricopeptide repeat-containing pr... 60 4e-08
XP_009602545.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 1e-07
XP_009602546.1 PREDICTED: pentatricopeptide repeat-containing pr... 59 1e-07
XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing pr... 54 1e-07
XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing pr... 57 6e-07
OIT21153.1 pentatricopeptide repeat-containing protein, chloropl... 57 6e-07
XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing pr... 49 4e-06
>XP_009776250.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana sylvestris] XP_016463308.1
PREDICTED: pentatricopeptide repeat-containing protein
At5g02830, chloroplastic-like [Nicotiana tabacum]
Length = 857
Score = 60.5 bits (145), Expect(2) = 4e-08
Identities = 27/52 (51%), Positives = 43/52 (82%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 359
V ++F ALLN+++VS G+V ++E+G+++ +V+ L+GAQKLGI PL+LF GA
Sbjct: 104 VNAAEFAALLNAKIVSDGIVRLLEEGKLKSVVELLTGAQKLGIEPLKLFDGA 155
Score = 24.3 bits (51), Expect(2) = 4e-08
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++ GE+EE+V LM L
Sbjct: 162 RECRRTMECGEIEEVVSLMETL 183
>XP_009602545.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X1 [Nicotiana tomentosiformis]
XP_016469097.1 PREDICTED: pentatricopeptide
repeat-containing protein At5g02830, chloroplastic-like
isoform X1 [Nicotiana tabacum]
Length = 856
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 359
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GAQKLGI PL+L GA
Sbjct: 96 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAQKLGIEPLKLLDGA 147
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++ GE+EE V LM L
Sbjct: 154 RECRRTMECGEIEEAVSLMETL 175
>XP_009602546.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic isoform X2 [Nicotiana tomentosiformis]
XP_016469098.1 PREDICTED: pentatricopeptide
repeat-containing protein At5g02830, chloroplastic-like
isoform X2 [Nicotiana tabacum]
Length = 849
Score = 59.3 bits (142), Expect(2) = 1e-07
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 359
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GAQKLGI PL+L GA
Sbjct: 96 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAQKLGIEPLKLLDGA 147
Score = 23.5 bits (49), Expect(2) = 1e-07
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++ GE+EE V LM L
Sbjct: 154 RECRRTMECGEIEEAVSLMETL 175
>XP_017253703.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Daucus carota subsp. sativus] KZM94478.1
hypothetical protein DCAR_017721 [Daucus carota subsp.
sativus]
Length = 827
Score = 53.5 bits (127), Expect(2) = 1e-07
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELF 350
VK S F L+N +LVS G++ M+ G++ R+V LSGAQKLG+ ELF
Sbjct: 88 VKVSDFANLINVDLVSKGLIRMLRSGDVERVVQVLSGAQKLGLSVAELF 136
Score = 29.3 bits (64), Expect(2) = 1e-07
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
+EC L+ +RG VE +VDL+ +L
Sbjct: 146 KECSLVAERGNVEAVVDLLEVL 167
>XP_019239264.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Nicotiana attenuata]
Length = 903
Score = 57.4 bits (137), Expect(2) = 6e-07
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 359
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GA KLGI PL+L GA
Sbjct: 140 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAHKLGIEPLKLLDGA 191
Score = 23.1 bits (48), Expect(2) = 6e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++ G++EE+V LM L
Sbjct: 198 RECKRTMECGDIEEVVSLMETL 219
>OIT21153.1 pentatricopeptide repeat-containing protein, chloroplastic
[Nicotiana attenuata]
Length = 867
Score = 57.4 bits (137), Expect(2) = 6e-07
Identities = 26/52 (50%), Positives = 41/52 (78%)
Frame = +3
Query: 204 VKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDALSGAQKLGIGPLELFGGA 359
V ++F ALLN+++VS G+V ++E+G++R +V+ L+GA KLGI PL+L GA
Sbjct: 104 VNAAEFAALLNAKIVSDGIVRLLEEGKLRSVVELLTGAHKLGIEPLKLLDGA 155
Score = 23.1 bits (48), Expect(2) = 6e-07
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++ G++EE+V LM L
Sbjct: 162 RECKRTMECGDIEEVVSLMETL 183
>XP_012831937.1 PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
chloroplastic [Erythranthe guttata] EYU41644.1
hypothetical protein MIMGU_mgv1a001284mg [Erythranthe
guttata]
Length = 847
Score = 48.9 bits (115), Expect(2) = 4e-06
Identities = 24/56 (42%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +3
Query: 186 VSSGRIVKPSQFVALLNSELVSMGVVEMVEKGEIRRLVDAL-SGAQKLGIGPLELF 350
V+SG VKPS+F+ALLN++ V++GV ++++G + +V L +G +K+GI P+++F
Sbjct: 97 VASG--VKPSEFLALLNAKCVAIGVARVLDEGNLHSVVKMLFNGLEKIGIDPVQMF 150
Score = 28.9 bits (63), Expect(2) = 4e-06
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 377 RECCLIVKRGEVEELVDLMGIL 442
REC ++KRGEVE+LV M L
Sbjct: 160 RECRRLLKRGEVEQLVSFMETL 181