BLASTX nr result

ID: Panax24_contig00021061 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00021061
         (664 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ONI30560.1 hypothetical protein PRUPE_1G258600 [Prunus persica]        99   6e-24
KVH97778.1 hypothetical protein Ccrd_000101 [Cynara cardunculus ...   100   6e-23
OIT30358.1 hypothetical protein A4A49_13121 [Nicotiana attenuata]      95   1e-21
XP_006340109.1 PREDICTED: protein LSM12 homolog [Solanum tuberosum]    97   1e-21
XP_004237256.1 PREDICTED: protein LSM12 homolog [Solanum lycoper...    97   1e-21
XP_017232601.1 PREDICTED: uncharacterized protein LOC108206724 [...    97   2e-21
XP_016572891.1 PREDICTED: protein LSM12 homolog isoform X1 [Caps...    97   2e-21
KZN06262.1 hypothetical protein DCAR_007099 [Daucus carota subsp...    97   2e-21
XP_010272019.1 PREDICTED: protein LSM12 homolog A [Nelumbo nucif...    96   2e-21
XP_016496953.1 PREDICTED: protein LSM12 homolog [Nicotiana tabacum]    96   3e-21
XP_009360484.1 PREDICTED: protein LSM12 homolog [Pyrus x bretsch...    96   3e-21
XP_008339997.1 PREDICTED: protein LSM12 homolog [Malus domestica]      96   3e-21
XP_008389599.1 PREDICTED: protein LSM12 homolog [Malus domestica]      96   3e-21
KJB15062.1 hypothetical protein B456_002G161300 [Gossypium raimo...    97   4e-21
XP_009798322.1 PREDICTED: protein LSM12 homolog [Nicotiana sylve...    96   5e-21
XP_017621294.1 PREDICTED: protein LSM12 homolog [Gossypium arbor...    95   6e-21
XP_008245217.1 PREDICTED: protein LSM12 homolog [Prunus mume]          95   7e-21
XP_018813301.1 PREDICTED: protein LSM12 homolog [Juglans regia]        95   7e-21
CDP00201.1 unnamed protein product [Coffea canephora]                  95   8e-21
XP_016743418.1 PREDICTED: protein LSM12 homolog [Gossypium hirsu...    95   8e-21

>ONI30560.1 hypothetical protein PRUPE_1G258600 [Prunus persica]
          Length = 60

 Score = 99.4 bits (246), Expect = 6e-24
 Identities = 49/59 (83%), Positives = 53/59 (89%)
 Frame = -3

Query: 350 LIRLSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           +IRL V WDKTVIVVMN VRVSSPY  ESV+GGTPAANERV+KVLELERKRLQ RG+GQ
Sbjct: 2   MIRLPVRWDKTVIVVMNAVRVSSPYTPESVSGGTPAANERVKKVLELERKRLQTRGSGQ 60


>KVH97778.1 hypothetical protein Ccrd_000101 [Cynara cardunculus var. scolymus]
          Length = 183

 Score =  100 bits (249), Expect = 6e-23
 Identities = 49/56 (87%), Positives = 52/56 (92%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKT IVVMNEVRVSSPY++ESVTGGTPAANERVRKVLELER+RLQ RGAGQ
Sbjct: 128 LPVRWDKTAIVVMNEVRVSSPYLAESVTGGTPAANERVRKVLELERRRLQTRGAGQ 183


>OIT30358.1 hypothetical protein A4A49_13121 [Nicotiana attenuata]
          Length = 98

 Score = 94.7 bits (234), Expect = 1e-21
 Identities = 48/57 (84%), Positives = 49/57 (85%)
 Frame = -3

Query: 344 RLSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           RL V WDKTVIVVMNEVRV+SPY  ESVTGGTPAANERVRKVL LERKRLQ R  GQ
Sbjct: 42  RLPVRWDKTVIVVMNEVRVNSPYRPESVTGGTPAANERVRKVLVLERKRLQTRNTGQ 98


>XP_006340109.1 PREDICTED: protein LSM12 homolog [Solanum tuberosum]
          Length = 179

 Score = 97.1 bits (240), Expect = 1e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESV GGTPAANERVRKVLELERKRLQ+R  GQ
Sbjct: 124 LPVRWDKTVIVVMNEVRVSSPYLPESVAGGTPAANERVRKVLELERKRLQSRNTGQ 179


>XP_004237256.1 PREDICTED: protein LSM12 homolog [Solanum lycopersicum]
           XP_015071733.1 PREDICTED: protein LSM12 homolog [Solanum
           pennellii]
          Length = 179

 Score = 97.1 bits (240), Expect = 1e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESV GGTPAANERVRKVLELERKRLQ+R  GQ
Sbjct: 124 LPVRWDKTVIVVMNEVRVSSPYLPESVAGGTPAANERVRKVLELERKRLQSRNTGQ 179


>XP_017232601.1 PREDICTED: uncharacterized protein LOC108206724 [Daucus carota
           subsp. sativus]
          Length = 192

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 49/56 (87%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY SE VTGGTPAANERVRKVLELERKRLQNR   Q
Sbjct: 137 LPVRWDKTVIVVMNEVRVSSPYTSERVTGGTPAANERVRKVLELERKRLQNRSPAQ 192


>XP_016572891.1 PREDICTED: protein LSM12 homolog isoform X1 [Capsicum annuum]
          Length = 192

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESV GGTPAANERVRKVLELERKRLQ R +GQ
Sbjct: 137 LPVRWDKTVIVVMNEVRVSSPYLPESVVGGTPAANERVRKVLELERKRLQTRNSGQ 192


>KZN06262.1 hypothetical protein DCAR_007099 [Daucus carota subsp. sativus]
          Length = 192

 Score = 97.1 bits (240), Expect = 2e-21
 Identities = 49/56 (87%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY SE VTGGTPAANERVRKVLELERKRLQNR   Q
Sbjct: 137 LPVRWDKTVIVVMNEVRVSSPYTSERVTGGTPAANERVRKVLELERKRLQNRSPAQ 192


>XP_010272019.1 PREDICTED: protein LSM12 homolog A [Nelumbo nucifera]
          Length = 179

 Score = 96.3 bits (238), Expect = 2e-21
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRG 183
           L VHWDKT IVVMNEVRVSSPY+ E+VTGGTPAANERV+KVLELERKRLQ+RG
Sbjct: 125 LPVHWDKTAIVVMNEVRVSSPYLPENVTGGTPAANERVKKVLELERKRLQSRG 177


>XP_016496953.1 PREDICTED: protein LSM12 homolog [Nicotiana tabacum]
          Length = 179

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESVTGGTPAANERVRKVL LERKRLQ R  GQ
Sbjct: 124 LPVRWDKTVIVVMNEVRVSSPYLPESVTGGTPAANERVRKVLVLERKRLQTRNTGQ 179


>XP_009360484.1 PREDICTED: protein LSM12 homolog [Pyrus x bretschneideri]
           XP_009363508.1 PREDICTED: protein LSM12 homolog [Pyrus x
           bretschneideri]
          Length = 180

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY  ESV+GGTPAANERV+KVLELER+RLQ RG GQ
Sbjct: 125 LPVRWDKTVIVVMNEVRVSSPYTPESVSGGTPAANERVKKVLELERRRLQTRGGGQ 180


>XP_008339997.1 PREDICTED: protein LSM12 homolog [Malus domestica]
          Length = 180

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY  ESV+GGTPAANERV+KVLELER+RLQ RG GQ
Sbjct: 125 LPVRWDKTVIVVMNEVRVSSPYTPESVSGGTPAANERVKKVLELERRRLQTRGGGQ 180


>XP_008389599.1 PREDICTED: protein LSM12 homolog [Malus domestica]
          Length = 180

 Score = 95.9 bits (237), Expect = 3e-21
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY  ESV+GGTPAANERV+KVLELER+RLQ RG GQ
Sbjct: 125 LPVRWDKTVIVVMNEVRVSSPYTPESVSGGTPAANERVKKVLELERRRLQTRGGGQ 180


>KJB15062.1 hypothetical protein B456_002G161300 [Gossypium raimondii]
          Length = 210

 Score = 96.7 bits (239), Expect = 4e-21
 Identities = 47/57 (82%), Positives = 50/57 (87%)
 Frame = -3

Query: 344 RLSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           RL V WDKTVIVVMNEVRVSSPY+ ESV+GGTPAANERVRKVLE ERKR+Q RG  Q
Sbjct: 154 RLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVRKVLEFERKRMQTRGTSQ 210


>XP_009798322.1 PREDICTED: protein LSM12 homolog [Nicotiana sylvestris]
          Length = 179

 Score = 95.5 bits (236), Expect = 5e-21
 Identities = 48/56 (85%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESVTGGTPAANERVRKVL LERKRLQ R  GQ
Sbjct: 124 LPVRWDKTVIVVMNEVRVSSPYLPESVTGGTPAANERVRKVLVLERKRLQTRNIGQ 179


>XP_017621294.1 PREDICTED: protein LSM12 homolog [Gossypium arboreum] KHG27703.1
           Protein LSM12 A [Gossypium arboreum]
          Length = 175

 Score = 95.1 bits (235), Expect = 6e-21
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESV+GGTPAANERVRKVLE ERKR+Q RG+ Q
Sbjct: 120 LPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVRKVLEFERKRMQTRGSSQ 175


>XP_008245217.1 PREDICTED: protein LSM12 homolog [Prunus mume]
          Length = 180

 Score = 95.1 bits (235), Expect = 7e-21
 Identities = 47/56 (83%), Positives = 50/56 (89%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMN VRVSSPY  ESV+GGTPAANERV+KVLELERKRLQ RG+GQ
Sbjct: 125 LPVRWDKTVIVVMNAVRVSSPYTPESVSGGTPAANERVKKVLELERKRLQTRGSGQ 180


>XP_018813301.1 PREDICTED: protein LSM12 homolog [Juglans regia]
          Length = 181

 Score = 95.1 bits (235), Expect = 7e-21
 Identities = 46/56 (82%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVV+NEVRVSSPY+ ESV GGTPAANERV+KVLE ERKRLQ RG GQ
Sbjct: 126 LPVRWDKTVIVVLNEVRVSSPYLPESVNGGTPAANERVKKVLEFERKRLQTRGGGQ 181


>CDP00201.1 unnamed protein product [Coffea canephora]
          Length = 188

 Score = 95.1 bits (235), Expect = 8e-21
 Identities = 47/56 (83%), Positives = 48/56 (85%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKT IVVMNEVRVSSPY+ ESV GGTPAANERVRKVLE ERKRLQ R AGQ
Sbjct: 133 LPVRWDKTTIVVMNEVRVSSPYLPESVVGGTPAANERVRKVLEFERKRLQTRSAGQ 188


>XP_016743418.1 PREDICTED: protein LSM12 homolog [Gossypium hirsutum]
          Length = 175

 Score = 94.7 bits (234), Expect = 8e-21
 Identities = 46/56 (82%), Positives = 49/56 (87%)
 Frame = -3

Query: 341 LSVHWDKTVIVVMNEVRVSSPYISESVTGGTPAANERVRKVLELERKRLQNRGAGQ 174
           L V WDKTVIVVMNEVRVSSPY+ ESV+GGTPAANERVRKVLE ERKR+Q RG  Q
Sbjct: 120 LPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVRKVLEFERKRMQTRGTSQ 175


Top