BLASTX nr result
ID: Panax24_contig00021021
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00021021
(423 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
OMO98063.1 hypothetical protein COLO4_14185 [Corchorus olitorius] 169 3e-48
KZM83708.1 hypothetical protein DCAR_028870 [Daucus carota subsp... 159 3e-47
EOY22976.1 Cleavage and polyadenylation specificity factor subun... 171 1e-46
XP_017972870.1 PREDICTED: cleavage and polyadenylation specifici... 171 1e-46
EOY22975.1 Cleavage and polyadenylation specificity factor 160 i... 171 1e-46
XP_017972867.1 PREDICTED: cleavage and polyadenylation specifici... 171 1e-46
XP_017972865.1 PREDICTED: cleavage and polyadenylation specifici... 171 1e-46
XP_017972864.1 PREDICTED: cleavage and polyadenylation specifici... 171 1e-46
EOY22974.1 Cleavage and polyadenylation specificity factor 160 i... 171 1e-46
XP_017247188.1 PREDICTED: cleavage and polyadenylation specifici... 167 2e-45
XP_012484369.1 PREDICTED: cleavage and polyadenylation specifici... 167 3e-45
XP_017649185.1 PREDICTED: cleavage and polyadenylation specifici... 167 3e-45
XP_016672502.1 PREDICTED: cleavage and polyadenylation specifici... 167 3e-45
XP_016668425.1 PREDICTED: cleavage and polyadenylation specifici... 167 3e-45
XP_012484368.1 PREDICTED: cleavage and polyadenylation specifici... 167 3e-45
KDO65373.1 hypothetical protein CISIN_1g0005452mg, partial [Citr... 165 9e-45
KDO65374.1 hypothetical protein CISIN_1g0005452mg, partial [Citr... 165 9e-45
XP_011101139.1 PREDICTED: cleavage and polyadenylation specifici... 165 1e-44
XP_011101138.1 PREDICTED: cleavage and polyadenylation specifici... 165 1e-44
XP_006490256.1 PREDICTED: cleavage and polyadenylation specifici... 165 1e-44
>OMO98063.1 hypothetical protein COLO4_14185 [Corchorus olitorius]
Length = 413
Score = 169 bits (427), Expect = 3e-48
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQF S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 325 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 384
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 385 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 413
>KZM83708.1 hypothetical protein DCAR_028870 [Daucus carota subsp. sativus]
Length = 163
Score = 159 bits (401), Expect = 3e-47
Identities = 80/93 (86%), Positives = 83/93 (89%)
Frame = +1
Query: 4 FRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQQ 183
F RLQSLQKKLV+SVPHVAGLNPRSF QFHSKGK HRPGPDSIVDCELLC FEML LEQQ
Sbjct: 71 FCRLQSLQKKLVESVPHVAGLNPRSFCQFHSKGKVHRPGPDSIVDCELLCPFEMLVLEQQ 130
Query: 184 LEIANQIGTTRAQIVSNLNDLTLGTSFL*ETRC 282
EIANQ+GTTR+QIVSNLNDL LGTSFL T C
Sbjct: 131 HEIANQMGTTRSQIVSNLNDLALGTSFLRGTAC 163
>EOY22976.1 Cleavage and polyadenylation specificity factor subunit 1 isoform 3
[Theobroma cacao]
Length = 1195
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1107 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1166
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1167 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1195
>XP_017972870.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X6 [Theobroma cacao]
Length = 1198
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1110 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1169
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1170 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1198
>EOY22975.1 Cleavage and polyadenylation specificity factor 160 isoform 2
[Theobroma cacao]
Length = 1257
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1169 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1228
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1229 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1257
>XP_017972867.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X3 [Theobroma cacao]
Length = 1395
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1307 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1366
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1367 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1395
>XP_017972865.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X2 [Theobroma cacao]
Length = 1456
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1368 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1427
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1428 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1456
>XP_017972864.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X1 [Theobroma cacao]
Length = 1457
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1369 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1428
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1429 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1457
>EOY22974.1 Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 171 bits (432), Expect = 1e-46
Identities = 81/89 (91%), Positives = 88/89 (98%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1369 TFRRLQSLQKKLVDAVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1428
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QL+IA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1429 QLDIAHQIGTTRSQILSNLNDLTLGTSFL 1457
>XP_017247188.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Daucus carota subsp. sativus] KZM96626.1
hypothetical protein DCAR_016012 [Daucus carota subsp.
sativus]
Length = 1446
Score = 167 bits (424), Expect = 2e-45
Identities = 83/89 (93%), Positives = 85/89 (95%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLV+SVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLC FEML LEQ
Sbjct: 1358 TFRRLQSLQKKLVESVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCQFEMLVLEQ 1417
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
Q EIANQIGTTR+QIVSNLNDL LGTSFL
Sbjct: 1418 QHEIANQIGTTRSQIVSNLNDLALGTSFL 1446
>XP_012484369.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X2 [Gossypium raimondii]
Length = 1349
Score = 167 bits (422), Expect = 3e-45
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFR F S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1261 TFRRLQSLQKKLVDAVPHVAGLNPRSFRHFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1320
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1321 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 1349
>XP_017649185.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X1 [Gossypium arboreum]
Length = 1456
Score = 167 bits (422), Expect = 3e-45
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFR F S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1368 TFRRLQSLQKKLVDAVPHVAGLNPRSFRHFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1427
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1428 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 1456
>XP_016672502.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Gossypium hirsutum]
Length = 1456
Score = 167 bits (422), Expect = 3e-45
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFR F S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1368 TFRRLQSLQKKLVDAVPHVAGLNPRSFRHFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1427
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1428 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 1456
>XP_016668425.1 PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Gossypium hirsutum]
Length = 1456
Score = 167 bits (422), Expect = 3e-45
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFR F S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1368 TFRRLQSLQKKLVDAVPHVAGLNPRSFRHFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1427
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1428 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 1456
>XP_012484368.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X1 [Gossypium raimondii] KJB34434.1 hypothetical
protein B456_006G065300 [Gossypium raimondii]
Length = 1456
Score = 167 bits (422), Expect = 3e-45
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVD+VPHVAGLNPRSFR F S GKAHRPGPDSIVDCELLCH+EMLPLE+
Sbjct: 1368 TFRRLQSLQKKLVDAVPHVAGLNPRSFRHFRSNGKAHRPGPDSIVDCELLCHYEMLPLEE 1427
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+QIGTTR+QI+SNLNDLTLGTSFL
Sbjct: 1428 QLEIAHQIGTTRSQILSNLNDLTLGTSFL 1456
>KDO65373.1 hypothetical protein CISIN_1g0005452mg, partial [Citrus sinensis]
Length = 890
Score = 165 bits (418), Expect = 9e-45
Identities = 80/89 (89%), Positives = 85/89 (95%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELL H+EMLPLE+
Sbjct: 802 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEE 861
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+Q GTTR+QI+SNLNDL LGTSFL
Sbjct: 862 QLEIAHQTGTTRSQILSNLNDLALGTSFL 890
>KDO65374.1 hypothetical protein CISIN_1g0005452mg, partial [Citrus sinensis]
Length = 891
Score = 165 bits (418), Expect = 9e-45
Identities = 80/89 (89%), Positives = 85/89 (95%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELL H+EMLPLE+
Sbjct: 803 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEE 862
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+Q GTTR+QI+SNLNDL LGTSFL
Sbjct: 863 QLEIAHQTGTTRSQILSNLNDLALGTSFL 891
>XP_011101139.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X2 [Sesamum indicum]
Length = 1250
Score = 165 bits (418), Expect = 1e-44
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1
Query: 4 FRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQQ 183
FRRLQSLQ+KLVD+VPHVAGLNPRSFR FHS GKAHRPGPDSIVDCELL H+EMLPLEQQ
Sbjct: 1163 FRRLQSLQRKLVDAVPHVAGLNPRSFRHFHSNGKAHRPGPDSIVDCELLSHYEMLPLEQQ 1222
Query: 184 LEIANQIGTTRAQIVSNLNDLTLGTSFL 267
L+IANQIGTTR QI+SNLNDLTLGTSFL
Sbjct: 1223 LDIANQIGTTRTQIISNLNDLTLGTSFL 1250
>XP_011101138.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X1 [Sesamum indicum]
Length = 1451
Score = 165 bits (418), Expect = 1e-44
Identities = 79/88 (89%), Positives = 84/88 (95%)
Frame = +1
Query: 4 FRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQQ 183
FRRLQSLQ+KLVD+VPHVAGLNPRSFR FHS GKAHRPGPDSIVDCELL H+EMLPLEQQ
Sbjct: 1364 FRRLQSLQRKLVDAVPHVAGLNPRSFRHFHSNGKAHRPGPDSIVDCELLSHYEMLPLEQQ 1423
Query: 184 LEIANQIGTTRAQIVSNLNDLTLGTSFL 267
L+IANQIGTTR QI+SNLNDLTLGTSFL
Sbjct: 1424 LDIANQIGTTRTQIISNLNDLTLGTSFL 1451
>XP_006490256.1 PREDICTED: cleavage and polyadenylation specificity factor subunit 1
isoform X2 [Citrus sinensis]
Length = 1457
Score = 165 bits (418), Expect = 1e-44
Identities = 80/89 (89%), Positives = 85/89 (95%)
Frame = +1
Query: 1 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSKGKAHRPGPDSIVDCELLCHFEMLPLEQ 180
TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHS GKAHRPGPDSIVDCELL H+EMLPLE+
Sbjct: 1369 TFRRLQSLQKKLVDSVPHVAGLNPRSFRQFHSNGKAHRPGPDSIVDCELLSHYEMLPLEE 1428
Query: 181 QLEIANQIGTTRAQIVSNLNDLTLGTSFL 267
QLEIA+Q GTTR+QI+SNLNDL LGTSFL
Sbjct: 1429 QLEIAHQTGTTRSQILSNLNDLALGTSFL 1457