BLASTX nr result

ID: Panax24_contig00020838 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020838
         (399 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_002284740.2 PREDICTED: uncharacterized protein LOC100254082 [...    62   7e-09
CBI18930.3 unnamed protein product, partial [Vitis vinifera]           62   1e-08

>XP_002284740.2 PREDICTED: uncharacterized protein LOC100254082 [Vitis vinifera]
           XP_010664145.1 PREDICTED: uncharacterized protein
           LOC100254082 [Vitis vinifera] CAN73522.1 hypothetical
           protein VITISV_004987 [Vitis vinifera]
          Length = 257

 Score = 62.0 bits (149), Expect = 7e-09
 Identities = 32/82 (39%), Positives = 35/82 (42%)
 Frame = +2

Query: 2   FEDGGWDXXXXXXXXXXXXXXXXXXXXXXXXYNGPQMDAQQDPGGYNQEAPVQXXXXXXX 181
           +EDGGWD                        YNGPQ+DAQQD GGYNQE P Q       
Sbjct: 175 YEDGGWDRNRGYARGRGRGRGRGFRGRGRGGYNGPQVDAQQDMGGYNQEPPFQGRGRGRG 234

Query: 182 XXXXXXXXXXXSNGPVHAAADG 247
                      SNGP+HA A G
Sbjct: 235 RGNRGRGRGARSNGPIHATAGG 256


>CBI18930.3 unnamed protein product, partial [Vitis vinifera]
          Length = 514

 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 32/82 (39%), Positives = 35/82 (42%)
 Frame = +2

Query: 2   FEDGGWDXXXXXXXXXXXXXXXXXXXXXXXXYNGPQMDAQQDPGGYNQEAPVQXXXXXXX 181
           +EDGGWD                        YNGPQ+DAQQD GGYNQE P Q       
Sbjct: 432 YEDGGWDRNRGYARGRGRGRGRGFRGRGRGGYNGPQVDAQQDMGGYNQEPPFQGRGRGRG 491

Query: 182 XXXXXXXXXXXSNGPVHAAADG 247
                      SNGP+HA A G
Sbjct: 492 RGNRGRGRGARSNGPIHATAGG 513


Top