BLASTX nr result
ID: Panax24_contig00020805
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00020805 (613 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus] 48 5e-10 KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp... 48 5e-10 KZN04147.1 hypothetical protein DCAR_004984 [Daucus carota subsp... 55 2e-06 XP_017231410.1 PREDICTED: uncharacterized protein LOC108205828 [... 57 6e-06 >XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus] Length = 455 Score = 48.1 bits (113), Expect(2) = 5e-10 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Frame = -3 Query: 524 SVSPPTVLXXXXXXXXXPIGFGEIPPTGFGES-PPTVNDTTSISTNLKPY 378 S SPP PIGFG+IPP+ FGES PP++N TT++ST ++P+ Sbjct: 387 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESPPPSMNSTTAMSTRVQPF 436 Score = 43.5 bits (101), Expect(2) = 5e-10 Identities = 18/27 (66%), Positives = 25/27 (92%) Frame = -2 Query: 381 ISTNLKPFIGCIILVISIITGKFILDM 301 +ST ++PFIGC+ILV SIITGKF+L++ Sbjct: 429 MSTRVQPFIGCVILVTSIITGKFVLNI 455 >KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp. sativus] Length = 421 Score = 48.1 bits (113), Expect(2) = 5e-10 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Frame = -3 Query: 524 SVSPPTVLXXXXXXXXXPIGFGEIPPTGFGES-PPTVNDTTSISTNLKPY 378 S SPP PIGFG+IPP+ FGES PP++N TT++ST ++P+ Sbjct: 353 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESPPPSMNSTTAMSTRVQPF 402 Score = 43.5 bits (101), Expect(2) = 5e-10 Identities = 18/27 (66%), Positives = 25/27 (92%) Frame = -2 Query: 381 ISTNLKPFIGCIILVISIITGKFILDM 301 +ST ++PFIGC+ILV SIITGKF+L++ Sbjct: 395 MSTRVQPFIGCVILVTSIITGKFVLNI 421 >KZN04147.1 hypothetical protein DCAR_004984 [Daucus carota subsp. sativus] Length = 114 Score = 55.1 bits (131), Expect = 2e-06 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = -2 Query: 612 VFHSKPSGSSKSMLNNLYRFVPSIREQLQ 526 VFHSKPSGSSK + NNLYRFVPSIREQLQ Sbjct: 48 VFHSKPSGSSKPIHNNLYRFVPSIREQLQ 76 >XP_017231410.1 PREDICTED: uncharacterized protein LOC108205828 [Daucus carota subsp. sativus] KZN04152.1 hypothetical protein DCAR_004989 [Daucus carota subsp. sativus] Length = 781 Score = 56.6 bits (135), Expect = 6e-06 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = -2 Query: 612 VFHSKPSGSSKSMLNNLYRFVPSIREQLQ 526 VFHSKPSGSSK M NNLYRFVPSIREQLQ Sbjct: 513 VFHSKPSGSSKPMHNNLYRFVPSIREQLQ 541