BLASTX nr result

ID: Panax24_contig00020805 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020805
         (613 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus]       48   5e-10
KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp...    48   5e-10
KZN04147.1 hypothetical protein DCAR_004984 [Daucus carota subsp...    55   2e-06
XP_017231410.1 PREDICTED: uncharacterized protein LOC108205828 [...    57   6e-06

>XP_017232165.1 PREDICTED: mucin-2 [Daucus carota subsp. sativus]
          Length = 455

 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -3

Query: 524 SVSPPTVLXXXXXXXXXPIGFGEIPPTGFGES-PPTVNDTTSISTNLKPY 378
           S SPP            PIGFG+IPP+ FGES PP++N TT++ST ++P+
Sbjct: 387 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESPPPSMNSTTAMSTRVQPF 436



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 18/27 (66%), Positives = 25/27 (92%)
 Frame = -2

Query: 381 ISTNLKPFIGCIILVISIITGKFILDM 301
           +ST ++PFIGC+ILV SIITGKF+L++
Sbjct: 429 MSTRVQPFIGCVILVTSIITGKFVLNI 455


>KZN04412.1 hypothetical protein DCAR_005249 [Daucus carota subsp. sativus]
          Length = 421

 Score = 48.1 bits (113), Expect(2) = 5e-10
 Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
 Frame = -3

Query: 524 SVSPPTVLXXXXXXXXXPIGFGEIPPTGFGES-PPTVNDTTSISTNLKPY 378
           S SPP            PIGFG+IPP+ FGES PP++N TT++ST ++P+
Sbjct: 353 SGSPPAAPTTSIPQPSAPIGFGDIPPSAFGESPPPSMNSTTAMSTRVQPF 402



 Score = 43.5 bits (101), Expect(2) = 5e-10
 Identities = 18/27 (66%), Positives = 25/27 (92%)
 Frame = -2

Query: 381 ISTNLKPFIGCIILVISIITGKFILDM 301
           +ST ++PFIGC+ILV SIITGKF+L++
Sbjct: 395 MSTRVQPFIGCVILVTSIITGKFVLNI 421


>KZN04147.1 hypothetical protein DCAR_004984 [Daucus carota subsp. sativus]
          Length = 114

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = -2

Query: 612 VFHSKPSGSSKSMLNNLYRFVPSIREQLQ 526
           VFHSKPSGSSK + NNLYRFVPSIREQLQ
Sbjct: 48  VFHSKPSGSSKPIHNNLYRFVPSIREQLQ 76


>XP_017231410.1 PREDICTED: uncharacterized protein LOC108205828 [Daucus carota
           subsp. sativus] KZN04152.1 hypothetical protein
           DCAR_004989 [Daucus carota subsp. sativus]
          Length = 781

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 27/29 (93%), Positives = 27/29 (93%)
 Frame = -2

Query: 612 VFHSKPSGSSKSMLNNLYRFVPSIREQLQ 526
           VFHSKPSGSSK M NNLYRFVPSIREQLQ
Sbjct: 513 VFHSKPSGSSKPMHNNLYRFVPSIREQLQ 541


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