BLASTX nr result
ID: Panax24_contig00020645
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax24_contig00020645
(588 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 149 3e-38
XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 149 3e-38
XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 134 6e-33
XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit ... 134 6e-33
EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative iso... 134 6e-33
OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis] 133 1e-32
XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 130 1e-31
XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 130 1e-31
CAN63470.1 hypothetical protein VITISV_024603 [Vitis vinifera] 130 2e-31
XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 130 2e-31
CBI40152.3 unnamed protein product, partial [Vitis vinifera] 130 2e-31
XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 128 9e-31
XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 126 3e-30
XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 125 6e-30
XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 123 5e-29
XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 123 5e-29
XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 123 5e-29
XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 123 5e-29
KHG00588.1 DNA-directed RNA polymerase E subunit 1 -like protein... 123 5e-29
XP_019185410.1 PREDICTED: DNA-directed RNA polymerase V subunit ... 123 5e-29
>XP_017225052.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Daucus
carota subsp. sativus]
Length = 1989
Score = 149 bits (377), Expect = 3e-38
Identities = 67/96 (69%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK KMG GI YVM++KHS+FQDTRCLYIVSTDGRKEDFSYRKCLEN++K K+P++ EAF
Sbjct: 1662 DKAAKMGAGIHYVMISKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENYMKEKFPDRGEAF 1721
Query: 407 MAKYFKRHNQPRPGWNRERSAA-PEEAATENKPRGW 303
MAKY KR+ QPRPGWN+ERS +A +NK +GW
Sbjct: 1722 MAKYLKRNQQPRPGWNKERSTPDTSNSAVKNKRKGW 1757
>XP_017257953.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Daucus carota
subsp. sativus] KZM90293.1 hypothetical protein
DCAR_022342 [Daucus carota subsp. sativus]
Length = 2116
Score = 149 bits (377), Expect = 3e-38
Identities = 67/96 (69%), Positives = 80/96 (83%), Gaps = 1/96 (1%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK KMG GI YVM++KHS+FQDTRCLYIVSTDGRKEDFSYRKCLEN++K K+P++ EAF
Sbjct: 1789 DKAAKMGAGIHYVMISKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENYMKEKFPDRGEAF 1848
Query: 407 MAKYFKRHNQPRPGWNRERSAA-PEEAATENKPRGW 303
MAKY KR+ QPRPGWN+ERS +A +NK +GW
Sbjct: 1849 MAKYLKRNQQPRPGWNKERSTPDTSNSAVKNKRKGW 1884
>XP_017984847.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Theobroma cacao]
Length = 1786
Score = 134 bits (337), Expect = 6e-33
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK +KMG G+DYVMV+KHSNF D+RC Y+VSTDGRK+DFSYRKCL+NFIKGKYP+ A+ F
Sbjct: 1698 DKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVF 1757
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+AKYF++ PR G RERS APE EN+
Sbjct: 1758 IAKYFRK---PRFGGFRERSVAPENTEGENR 1785
>XP_007010999.2 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Theobroma cacao]
Length = 1788
Score = 134 bits (337), Expect = 6e-33
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK +KMG G+DYVMV+KHSNF D+RC Y+VSTDGRK+DFSYRKCL+NFIKGKYP+ A+ F
Sbjct: 1700 DKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVF 1759
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+AKYF++ PR G RERS APE EN+
Sbjct: 1760 IAKYFRK---PRFGGFRERSVAPENTEGENR 1787
>EOY19809.1 DNA-directed RNA polymerase E subunit 1, putative isoform 1
[Theobroma cacao] EOY19810.1 DNA-directed RNA polymerase
E subunit 1, putative isoform 1 [Theobroma cacao]
Length = 1788
Score = 134 bits (337), Expect = 6e-33
Identities = 61/91 (67%), Positives = 74/91 (81%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK +KMG G+DYVMV+KHSNF D+RC Y+VSTDGRK+DFSYRKCL+NFIKGKYP+ A+ F
Sbjct: 1700 DKAIKMGAGVDYVMVSKHSNFPDSRCFYVVSTDGRKQDFSYRKCLDNFIKGKYPDMADVF 1759
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+AKYF++ PR G RERS APE EN+
Sbjct: 1760 IAKYFRK---PRFGGFRERSVAPENTEGENR 1787
>OMP00131.1 RNA polymerase, alpha subunit [Corchorus capsularis]
Length = 1928
Score = 133 bits (335), Expect = 1e-32
Identities = 62/95 (65%), Positives = 77/95 (81%), Gaps = 2/95 (2%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK KMG G+DYVM++KH++FQDTRC Y+VSTDG+KEDFSYRKCLE+F+KGKYPE A+AF
Sbjct: 1821 DKAAKMGAGVDYVMISKHTDFQDTRCFYVVSTDGQKEDFSYRKCLESFVKGKYPEMADAF 1880
Query: 407 MAKYFKRHNQPRPGWNRERSA--APEEAATENKPR 309
+ KYFK+ RPG NRERSA AP+E ++ R
Sbjct: 1881 IEKYFKK---TRPGGNRERSASVAPDEGENQHPHR 1912
>XP_018849434.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Juglans regia]
Length = 1840
Score = 130 bits (327), Expect = 1e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GID+ MV++HSN+QD+RC Y+VSTDGRKEDFSYRKCL+NFIK KYP+ AEAF
Sbjct: 1751 DKAVKMGAGIDHFMVSRHSNYQDSRCFYVVSTDGRKEDFSYRKCLDNFIKSKYPDVAEAF 1810
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEE 333
+AKYF++ PR G NRE ++ PEE
Sbjct: 1811 LAKYFRK---PRSGGNRESNSVPEE 1832
>XP_018849433.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Juglans regia]
Length = 1932
Score = 130 bits (327), Expect = 1e-31
Identities = 59/85 (69%), Positives = 72/85 (84%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GID+ MV++HSN+QD+RC Y+VSTDGRKEDFSYRKCL+NFIK KYP+ AEAF
Sbjct: 1843 DKAVKMGAGIDHFMVSRHSNYQDSRCFYVVSTDGRKEDFSYRKCLDNFIKSKYPDVAEAF 1902
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEE 333
+AKYF++ PR G NRE ++ PEE
Sbjct: 1903 LAKYFRK---PRSGGNRESNSVPEE 1924
>CAN63470.1 hypothetical protein VITISV_024603 [Vitis vinifera]
Length = 1081
Score = 130 bits (326), Expect = 2e-31
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMGTGIDYVMV++HS+F ++RC Y+VSTDG KEDFSYRKCLENFIK KYP+ AE F
Sbjct: 981 DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1040
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+ KYF+R PR G NRERS PE+ +
Sbjct: 1041 IGKYFRR---PRAGGNRERSVIPEDGGNREQ 1068
>XP_002265533.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
Length = 1830
Score = 130 bits (326), Expect = 2e-31
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMGTGIDYVMV++HS+F ++RC Y+VSTDG KEDFSYRKCLENFIK KYP+ AE F
Sbjct: 1730 DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1789
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+ KYF+R PR G NRERS PE+ +
Sbjct: 1790 IGKYFRR---PRAGGNRERSVIPEDGGNREQ 1817
>CBI40152.3 unnamed protein product, partial [Vitis vinifera]
Length = 1890
Score = 130 bits (326), Expect = 2e-31
Identities = 60/91 (65%), Positives = 71/91 (78%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMGTGIDYVMV++HS+F ++RC Y+VSTDG KEDFSYRKCLENFIK KYP+ AE F
Sbjct: 1790 DKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAETF 1849
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENK 315
+ KYF+R PR G NRERS PE+ +
Sbjct: 1850 IGKYFRR---PRAGGNRERSVIPEDGGNREQ 1877
>XP_011089162.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Sesamum indicum]
Length = 2096
Score = 128 bits (321), Expect = 9e-31
Identities = 57/84 (67%), Positives = 68/84 (80%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK +KMG GIDY+MV++H FQD+RC Y VS DG K DFSYRKCLENFIKGKYP++AEAF
Sbjct: 1920 DKALKMGAGIDYIMVSRHGEFQDSRCFYAVSVDGSKADFSYRKCLENFIKGKYPDKAEAF 1979
Query: 407 MAKYFKRHNQPRPGWNRERSAAPE 336
+ KYFK+ +QPR GWNR+R E
Sbjct: 1980 ITKYFKK-SQPRAGWNRDRPPRSE 2002
>XP_008465860.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
Length = 1964
Score = 126 bits (317), Expect = 3e-30
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK KMG GID+ MV++HS+FQ++RC Y+V+TDG KEDFSYRKCL+NFIKGKYP+ AE F
Sbjct: 1859 DKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDMAEMF 1918
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENKPRGWE 300
+AKYF++ PRP NR+R+ A EE ENK G E
Sbjct: 1919 VAKYFRK---PRPNRNRDRNPASEE--NENKSVGGE 1949
>XP_011655250.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis sativus]
XP_011655251.1 PREDICTED: DNA-directed RNA polymerase V
subunit 1 [Cucumis sativus] KGN51090.1 hypothetical
protein Csa_5G435050 [Cucumis sativus]
Length = 1963
Score = 125 bits (315), Expect = 6e-30
Identities = 60/96 (62%), Positives = 75/96 (78%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK KMG GID+ MV++HS+FQ++RC Y+V+TDG KEDFSYRKCL+NFIKGKYP+ AE F
Sbjct: 1859 DKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKEDFSYRKCLDNFIKGKYPDLAEMF 1918
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEAATENKPRGWE 300
+AKYF++ PRP NR+R+ A EE ENK G E
Sbjct: 1919 VAKYFRK---PRPNRNRDRNPASEE--NENKSIGGE 1949
>XP_012449584.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
[Gossypium raimondii]
Length = 1921
Score = 123 bits (308), Expect = 5e-29
Identities = 59/86 (68%), Positives = 67/86 (77%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GIDYVMVNKHS F DTRCLY+V+TDG K+DFSY KCLEN IKGKYP+ AEAF
Sbjct: 1805 DKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAF 1864
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEA 330
+AKYF++ NRER APE +
Sbjct: 1865 VAKYFRKSR-----GNRERGVAPENS 1885
>XP_016714729.1 PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Gossypium
hirsutum]
Length = 1957
Score = 123 bits (308), Expect = 5e-29
Identities = 59/86 (68%), Positives = 67/86 (77%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GIDYVMVNKHS F DTRCLY+V+TDG K+DFSY KCLEN IKGKYP+ AEAF
Sbjct: 1844 DKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAF 1903
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEA 330
+AKYF++ NRER APE +
Sbjct: 1904 VAKYFRKSR-----GNRERGVAPENS 1924
>XP_012449583.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
[Gossypium raimondii] KJB67887.1 hypothetical protein
B456_010G216600 [Gossypium raimondii]
Length = 1966
Score = 123 bits (308), Expect = 5e-29
Identities = 59/86 (68%), Positives = 67/86 (77%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GIDYVMVNKHS F DTRCLY+V+TDG K+DFSY KCLEN IKGKYP+ AEAF
Sbjct: 1850 DKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAF 1909
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEA 330
+AKYF++ NRER APE +
Sbjct: 1910 VAKYFRKSR-----GNRERGVAPENS 1930
>XP_017645439.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Gossypium
arboreum]
Length = 1969
Score = 123 bits (308), Expect = 5e-29
Identities = 59/86 (68%), Positives = 67/86 (77%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GIDYVMVNKHS F DTRCLY+V+TDG K+DFSY KCLEN IKGKYP+ AEAF
Sbjct: 1856 DKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAF 1915
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEA 330
+AKYF++ NRER APE +
Sbjct: 1916 VAKYFRKSR-----GNRERGVAPENS 1936
>KHG00588.1 DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
arboreum]
Length = 1996
Score = 123 bits (308), Expect = 5e-29
Identities = 59/86 (68%), Positives = 67/86 (77%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK VKMG GIDYVMVNKHS F DTRCLY+V+TDG K+DFSY KCLEN IKGKYP+ AEAF
Sbjct: 1883 DKAVKMGAGIDYVMVNKHSLFLDTRCLYVVTTDGHKQDFSYLKCLENMIKGKYPDLAEAF 1942
Query: 407 MAKYFKRHNQPRPGWNRERSAAPEEA 330
+AKYF++ NRER APE +
Sbjct: 1943 VAKYFRKSR-----GNRERGVAPENS 1963
>XP_019185410.1 PREDICTED: DNA-directed RNA polymerase V subunit 1 [Ipomoea nil]
Length = 2072
Score = 123 bits (308), Expect = 5e-29
Identities = 57/89 (64%), Positives = 69/89 (77%), Gaps = 2/89 (2%)
Frame = -2
Query: 587 DKVVKMGTGIDYVMVNKHSNFQDTRCLYIVSTDGRKEDFSYRKCLENFIKGKYPEQAEAF 408
DK K+G GID++M++KHS+FQDTRC Y+VSTDG K+DFSYRK LENFIK K+P+ EAF
Sbjct: 1962 DKASKIGAGIDHLMISKHSSFQDTRCFYVVSTDGSKQDFSYRKSLENFIKNKFPDTGEAF 2021
Query: 407 MAKYF--KRHNQPRPGWNRERSAAPEEAA 327
KYF K PRPGW R++S APE AA
Sbjct: 2022 TQKYFVKKLPPLPRPGWRRDQSGAPEAAA 2050