BLASTX nr result
ID: Panax24_contig00020611
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax24_contig00020611 (397 letters) Database: ./nr 115,041,592 sequences; 42,171,959,267 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value XP_017227807.1 PREDICTED: uncharacterized protein LOC108203403 [... 57 5e-08 XP_017228253.1 PREDICTED: uncharacterized protein LOC108203692, ... 55 6e-08 GAV85209.1 zf-RVT domain-containing protein [Cephalotus follicul... 48 2e-06 XP_017250834.1 PREDICTED: uncharacterized protein LOC108221468 [... 52 9e-06 >XP_017227807.1 PREDICTED: uncharacterized protein LOC108203403 [Daucus carota subsp. sativus] Length = 664 Score = 56.6 bits (135), Expect(2) = 5e-08 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = -2 Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136 V+S + NS W LP+SNH DVI RS L + +D + W + + +K S+IW+ I Sbjct: 439 VASFMSNSSWLLPSSNHLDVIQLRS---LIGSIPIHSRDSITWMNSAS--IKISSIWQCI 493 Query: 135 RRVGLTVRWHSLVWHKIVPPRHSF 64 R + T W VWH+ P+ +F Sbjct: 494 RSISTTPPWIIGVWHQFAIPKCAF 517 Score = 27.7 bits (60), Expect(2) = 5e-08 Identities = 10/22 (45%), Positives = 17/22 (77%) Frame = -1 Query: 67 FSLWLAFHKGLRTLDKLLQFGL 2 F+LWLAF + L T D++++F + Sbjct: 517 FTLWLAFKERLLTKDRMIKFNM 538 >XP_017228253.1 PREDICTED: uncharacterized protein LOC108203692, partial [Daucus carota subsp. sativus] Length = 1676 Score = 54.7 bits (130), Expect(2) = 6e-08 Identities = 33/84 (39%), Positives = 42/84 (50%) Frame = -2 Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136 V SIIH W+ SN + R S +R SD +LWDG+ K V S IW SI Sbjct: 1477 VQSIIHEGAWRPSPSNDISARSIRQSILATRIHTSDA---VLWDGS--KHVNISVIWDSI 1531 Query: 135 RRVGLTVRWHSLVWHKIVPPRHSF 64 RR W S VWH++ P+ +F Sbjct: 1532 RRRCTPPAWTSAVWHQLAIPKCAF 1555 Score = 29.3 bits (64), Expect(2) = 6e-08 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -1 Query: 67 FSLWLAFHKGLRTLDKLLQFG 5 F +WLA H L T DKL+ +G Sbjct: 1555 FFMWLALHSSLLTRDKLINYG 1575 >GAV85209.1 zf-RVT domain-containing protein [Cephalotus follicularis] Length = 451 Score = 48.1 bits (113), Expect(2) = 2e-06 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%) Frame = -2 Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSF-DLSRNCDSDCQDGLLWDGTMAKEVKASTIWRS 139 V +I RW P +N D++ + S D+ + SD + W G + WRS Sbjct: 218 VKEVIREGRWDWP-ANSTDLVDIQISVQDIPLSSTSD---SIFW-GELGCSFSTKLAWRS 272 Query: 138 IRRVGLTVRWHSLVWHKIVPPRHSF 64 IR V WH+LVWH P+H+F Sbjct: 273 IRARSAEVGWHNLVWHPARIPKHAF 297 Score = 30.4 bits (67), Expect(2) = 2e-06 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = -1 Query: 67 FSLWLAFHKGLRTLDKLLQFGL 2 F LWLA +G RT DKLL +G+ Sbjct: 297 FCLWLAMRRGHRTRDKLLAWGV 318 >XP_017250834.1 PREDICTED: uncharacterized protein LOC108221468 [Daucus carota subsp. sativus] Length = 167 Score = 52.4 bits (124), Expect = 9e-06 Identities = 30/85 (35%), Positives = 43/85 (50%) Frame = -2 Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136 V S+I N +W + +SN + RS D + + +D +LW + V TIW SI Sbjct: 9 VGSVIRNGQWVVSSSNDYRAVQIRSLLD---SVNIGGRDAVLWSNDLV--VNLRTIWESI 63 Query: 135 RRVGLTVRWHSLVWHKIVPPRHSFL 61 RR G + W LVW+K P SF+ Sbjct: 64 RRRGTSQPWIPLVWNKFHIPSCSFI 88