BLASTX nr result

ID: Panax24_contig00020611 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020611
         (397 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_017227807.1 PREDICTED: uncharacterized protein LOC108203403 [...    57   5e-08
XP_017228253.1 PREDICTED: uncharacterized protein LOC108203692, ...    55   6e-08
GAV85209.1 zf-RVT domain-containing protein [Cephalotus follicul...    48   2e-06
XP_017250834.1 PREDICTED: uncharacterized protein LOC108221468 [...    52   9e-06

>XP_017227807.1 PREDICTED: uncharacterized protein LOC108203403 [Daucus carota
           subsp. sativus]
          Length = 664

 Score = 56.6 bits (135), Expect(2) = 5e-08
 Identities = 31/84 (36%), Positives = 46/84 (54%)
 Frame = -2

Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136
           V+S + NS W LP+SNH DVI  RS   L  +     +D + W  + +  +K S+IW+ I
Sbjct: 439 VASFMSNSSWLLPSSNHLDVIQLRS---LIGSIPIHSRDSITWMNSAS--IKISSIWQCI 493

Query: 135 RRVGLTVRWHSLVWHKIVPPRHSF 64
           R +  T  W   VWH+   P+ +F
Sbjct: 494 RSISTTPPWIIGVWHQFAIPKCAF 517



 Score = 27.7 bits (60), Expect(2) = 5e-08
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -1

Query: 67  FSLWLAFHKGLRTLDKLLQFGL 2
           F+LWLAF + L T D++++F +
Sbjct: 517 FTLWLAFKERLLTKDRMIKFNM 538


>XP_017228253.1 PREDICTED: uncharacterized protein LOC108203692, partial [Daucus
            carota subsp. sativus]
          Length = 1676

 Score = 54.7 bits (130), Expect(2) = 6e-08
 Identities = 33/84 (39%), Positives = 42/84 (50%)
 Frame = -2

Query: 315  VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136
            V SIIH   W+   SN     + R S   +R   SD    +LWDG+  K V  S IW SI
Sbjct: 1477 VQSIIHEGAWRPSPSNDISARSIRQSILATRIHTSDA---VLWDGS--KHVNISVIWDSI 1531

Query: 135  RRVGLTVRWHSLVWHKIVPPRHSF 64
            RR      W S VWH++  P+ +F
Sbjct: 1532 RRRCTPPAWTSAVWHQLAIPKCAF 1555



 Score = 29.3 bits (64), Expect(2) = 6e-08
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 67   FSLWLAFHKGLRTLDKLLQFG 5
            F +WLA H  L T DKL+ +G
Sbjct: 1555 FFMWLALHSSLLTRDKLINYG 1575


>GAV85209.1 zf-RVT domain-containing protein [Cephalotus follicularis]
          Length = 451

 Score = 48.1 bits (113), Expect(2) = 2e-06
 Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
 Frame = -2

Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSF-DLSRNCDSDCQDGLLWDGTMAKEVKASTIWRS 139
           V  +I   RW  P +N  D++  + S  D+  +  SD    + W G +         WRS
Sbjct: 218 VKEVIREGRWDWP-ANSTDLVDIQISVQDIPLSSTSD---SIFW-GELGCSFSTKLAWRS 272

Query: 138 IRRVGLTVRWHSLVWHKIVPPRHSF 64
           IR     V WH+LVWH    P+H+F
Sbjct: 273 IRARSAEVGWHNLVWHPARIPKHAF 297



 Score = 30.4 bits (67), Expect(2) = 2e-06
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -1

Query: 67  FSLWLAFHKGLRTLDKLLQFGL 2
           F LWLA  +G RT DKLL +G+
Sbjct: 297 FCLWLAMRRGHRTRDKLLAWGV 318


>XP_017250834.1 PREDICTED: uncharacterized protein LOC108221468 [Daucus carota
           subsp. sativus]
          Length = 167

 Score = 52.4 bits (124), Expect = 9e-06
 Identities = 30/85 (35%), Positives = 43/85 (50%)
 Frame = -2

Query: 315 VSSIIHNSRWKLPTSNHNDVIAFRSSFDLSRNCDSDCQDGLLWDGTMAKEVKASTIWRSI 136
           V S+I N +W + +SN    +  RS  D   + +   +D +LW   +   V   TIW SI
Sbjct: 9   VGSVIRNGQWVVSSSNDYRAVQIRSLLD---SVNIGGRDAVLWSNDLV--VNLRTIWESI 63

Query: 135 RRVGLTVRWHSLVWHKIVPPRHSFL 61
           RR G +  W  LVW+K   P  SF+
Sbjct: 64  RRRGTSQPWIPLVWNKFHIPSCSFI 88


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