BLASTX nr result

ID: Panax24_contig00020527 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax24_contig00020527
         (390 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KCW55239.1 hypothetical protein EUGRSUZ_I01172 [Eucalyptus grandis]    53   4e-06
XP_006349360.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    54   6e-06
XP_016539068.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    53   6e-06
KCW55238.1 hypothetical protein EUGRSUZ_I01172 [Eucalyptus grandis]    53   7e-06
XP_016539067.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-lik...    53   8e-06

>KCW55239.1 hypothetical protein EUGRSUZ_I01172 [Eucalyptus grandis]
          Length = 160

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +1

Query: 310 KNDSPPADDVCPICFGNFTIPFKTNCG 390
           K DSPP DDVCPICFG+FT+P KT CG
Sbjct: 19  KQDSPPDDDVCPICFGDFTVPCKTVCG 45


>XP_006349360.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum
           tuberosum]
          Length = 226

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +1

Query: 307 RKNDSPPADDVCPICFGNFTIPFKTNCG 390
           R+++ PP DD CPICFGNF+IP KTNCG
Sbjct: 29  RESEKPPEDDCCPICFGNFSIPCKTNCG 56


>XP_016539068.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2
           [Capsicum annuum]
          Length = 193

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = +1

Query: 310 KNDSPPADDVCPICFGNFTIPFKTNCG 390
           +++ PP DD CPICFGNFTIP KTNCG
Sbjct: 26  ESEKPPEDDCCPICFGNFTIPCKTNCG 52


>KCW55238.1 hypothetical protein EUGRSUZ_I01172 [Eucalyptus grandis]
          Length = 211

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 21/27 (77%), Positives = 23/27 (85%)
 Frame = +1

Query: 310 KNDSPPADDVCPICFGNFTIPFKTNCG 390
           K DSPP DDVCPICFG+FT+P KT CG
Sbjct: 19  KQDSPPDDDVCPICFGDFTVPCKTVCG 45


>XP_016539067.1 PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1
           [Capsicum annuum]
          Length = 222

 Score = 53.1 bits (126), Expect = 8e-06
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = +1

Query: 310 KNDSPPADDVCPICFGNFTIPFKTNCG 390
           +++ PP DD CPICFGNFTIP KTNCG
Sbjct: 26  ESEKPPEDDCCPICFGNFTIPCKTNCG 52


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